|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000135_pilon:116909..119208+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_000334 ID=XLOC_000334|Name=XLOC_000334|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2300bp|location=Sequence derived from alignment at sc0000135_pilon:116909..119208+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGGAGGAGTATGTGTCAAGTACTCATtgcttattttcaattttatatt
cTGGGTAAGTTTAGTGATCAGGTCAACAtttaggggccgtccacatagta
cgtacgcactaaaatgtcgaaaatcaaGTATTTCCTCCCCCAtatacgca
agcgtacgcaaatggctataccccctggtaagtacataatttttcattca
ccccctcCCTCTACcatgaaaagcacaggtcgaaatcatatatcgacgct
gtgccgaccaatccagattctattcagcgcgcaatcaacgcagagaaaag
taaccatgacgactatccaagatcttggatgaagttcaaagttgatattt
ttattcccgtcgttaaAAACACAACTGAAAAATATCAtcgatgcttttta
aaaagagtcagtgatagagaatcataacataaagtctgtctattatttcg
attcaattaaagtgacatttccacaATTAAGagtttattttatagtaatt
actgttatacatttggggatcatgtaaaagataatttttctctgcgtacg
tacattttcctttgacccctcccctccccctgtacgcaagtaTACCTTTT
TtagaaaccccccccccttagtgcgtacatACTATGTGGACGACCcctta
cgacatttactttctccattttttgggcaaattttgcaTCTCATCTTACA
GGGTCTAAATTTCGTTTGTTCAACTGTCAAGATCCAATCTTTGCTCCCTG
TATATAAGTGGATCTAACAgaggattttcaaaattgtagtGAACAAGGTT
CTTTCAGGGgacttctcttttttttttacctcaGGGTCAGTTTTCGGTAA
AGAAGGGGTGATCCGCCtggtctgtgatacagggaAGTCATTCCAAAACT
ATTTCGAACCTAATAAATATTCATGTCATTGACTTTCCAAAGACTCAAGA
CCGAAATATGGTTACGGTACTCTTAAAAACAGCAACTCCGGCCATTTTTT
AGCATGAAATCAACAGAACTTCAGCGAATTTGCTAAAATTAGTTCTGGTT
TGATGCAATCTAAATATTCAAGTTGTCACTTTTAACACATATACTTCTCG
ACGACTAGTGGACGCCTGTCCTAGGACAAGGACTTTGAAAGTAGTCATTG
TTCGAAAGATATTCAAGCTCTTCCGTTCATTACTTTCAGATTATTGGGAT
CGCACTCATCAGCCTTGGAGCGtatctaaaatcgaaatatggaGATTACT
TATCTTATAACGAGAGTGACAAATTTATATCAATGTCAATGTTTCTTATC
ATTCTTGgtctgtttatttttttaattgctttCCTCGGATGTTTTGGTGT
TTTCAGAGAGAACCAATTTCTGATTACATGTTTTGCTGTTTGCATGGCTG
TCATTATGATCCTTGAGATTACTGCTGGAATTCTTGGTTATGTTTATAGA
GGAAAGGTATGTGTTCCTCATCTGGTTTTAGACCATCCAAAAGcgtttga
tgatttttttcaatctctGCCTAAAACTTTTGCCTAATCAAGTCgaatgt
gaaaatgaaaatcggtCTTGCAATAATTCGTCAATAAAACGTGGCCGTAT
TGAACTATTTTCTAATGCCCCTAAACTTCTAACTCTTAAAAGGAGACCAC
TAAAAACAGAGATTTGGGTGTGAGTTTGCTTCTCAAAAATTCAACTTTCC
ATAATATACAGGTTGAAACAATAGTTGACAACACTTTAAATCAAGCTGTC
AGTAAGTATTTTGACCAAAACCAACCAGGAGCTAAAACACTCTTAGATTG
GGCTCAACAACAGTTTGACTGCTGTGGTATCGAAGGTTTTAATGATTATC
AACAACCATCGAAGAATTCAACTGATTTTTGTTACCAATCGGGTGGAGTA
GCTTCATGTTATTCTGATAACAAGTGTGATTCCGGAGAGCAATACAAAGA
AGGCTGTAAACAGAATGTAATTGACCTTGCTGAAAATAATATGTTGCTAT
GTGGAGCTGTTGCATTAGCATTCGCTGGAATCCAAGTTAGTATGATTTGA
TAATTACAATAATTTGTTAGTGAAGTTATTTTTTCCCCCAGAAAAGAAAA
CATCCCGAGTATCTACTTCTAACTTACAAGATAATAATTTTTATCTAGAT
TTAGGTCTTAGCTGTATCAGTTCATGAACACGGTCAACTACCATCTTACG
atcttaatttatttttattcgaTTTTCATTTTAGATACTTGGACTGATTC
TTGCTTGCTGTCTAATAAGagtaataaaatataattacatgTATGTTTAA
Coding sequence (CDS) from alignment at sc0000135_pilon:116909..119208+ >XLOC_000334 ID=XLOC_000334|Name=XLOC_000334|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1422bp|location=Sequence derived from alignment at sc0000135_pilon:116909..119208+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGGAGGAGTATGTGTCAAGTACTCATtgcttattttcaattttatatt
cTGGATGGGAGGAGTATGTGTCAAGTACTCATtgcttattttcaatttta
tattcTGGATTATTGGGATCGCACTCATCAGCCTTGGAGCGtatctaaaa
tcgaaatatggaGATTACTTATCTTATAACGAGAGTGACAAATTTATATC
AATGTCAATGTTTCTTATCATTCTTGgtctgtttatttttttaattgctt
tCCTCGGATGTTTTGGTGTTTTCAGAGAGAACCAATTTCTGATTACATGT
TTTGCTGTTTGCATGGCTGTCATTATGATCCTTGAGATTACTGCTGGAAT
TCTTGGTTATGTTTATAGAGGAAAGATTATTGGGATCGCACTCATCAGCC
TTGGAGCGtatctaaaatcgaaatatggaGATTACTTATCTTATAACGAG
AGTGACAAATTTATATCAATGTCAATGTTTCTTATCATTCTTGgtctgtt
tatttttttaattgctttCCTCGGATGTTTTGGTGTTTTCAGAGAGAACC
AATTTCTGATTACATGTTTTGCTGTTTGCATGGCTGTCATTATGATCCTT
GAGATTACTGCTGGAATTCTTGGTTATGTTTATAGAGGAAAGGTTGAAAC
AATAGTTGACAACACTTTAAATCAAGCTGTCAGTAAGTATTTTGACCAAA
ACCAACCAGGAGCTAAAACACTCTTAGATTGGGCTCAACAACAGTTTGAC
TGCTGTGGTATCGAAGGTTTTAATGATTATCAACAACCATCGAAGAATTC
AACTGATTTTTGTTACCAATCGGGTGGAGTAGCTTCATGTTATTCTGATA
ACAAGTGTGATTCCGGAGAGCAATACAAAGAAGGCTGTAAACAGAATGTA
ATTGACCTTGCTGAAAATAATATGTTGCTATGTGGAGCTGTTGCATTAGC
ATTCGCTGGAATCCAAGTTGAAACAATAGTTGACAACACTTTAAATCAAG
CTGTCAGTAAGTATTTTGACCAAAACCAACCAGGAGCTAAAACACTCTTA
GATTGGGCTCAACAACAGTTTGACTGCTGTGGTATCGAAGGTTTTAATGA
TTATCAACAACCATCGAAGAATTCAACTGATTTTTGTTACCAATCGGGTG
GAGTAGCTTCATGTTATTCTGATAACAAGTGTGATTCCGGAGAGCAATAC
AAAGAAGGCTGTAAACAGAATGTAATTGACCTTGCTGAAAATAATATGTT
GCTATGTGGAGCTGTTGCATTAGCATTCGCTGGAATCCAAATACTTGGAC
TGATTCTTGCTTGCTGTCTAATAAGagtaataaaatataattacatgTAT
GTTTAAATACTTGGACTGATTCTTGCTTGCTGTCTAATAAGagtaataaa
atataattacatgTATGTTTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000135_pilon | genome | sc0000135_pilon:116909..119208 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 646-711:2235 |
| Aaloc | 322-645:1712 |
| Aaloc | 55-321:1190 |
| Aaloc | 1-54:1 |
|
