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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000135_pilon:164480..167030+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_000332 ID=XLOC_000332|Name=XLOC_000332|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2551bp|location=Sequence derived from alignment at sc0000135_pilon:164480..167030+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGATTCCATCGAGAATACAAACAAAGATCCAAATAGGATGTTTTGCTTT
ACTGATATGTGTTTTTCTTTCTATGCTTCATTTTCTTTGTCAGAGAGGTA
AGACTATtatctttttcaaacatttcattTAAATCAGTAATAAGACGACA
GAGGAGCCCATATCTCAACTTGAGTGAATACAAAACAAGTCAATAGATCA
TTTTCTACCCTCTTGCATCTGTCAGTcaagttatttttttgaatttttct
tgatCACGTGAGAATTTCAAGCCCCAGAAATAACTAATGCTTAGTGACGA
AAAAGTACAAAATTGAGGACAAAGAGGTCTTTGACCTTGAGAGAGGTTTG
ACCTTCCTTATGACAATATTTTTACCAGCAGTCccaaaatctttgttttt
ctgcAGTCTTCCTTCTCGAGAATGTATTTTTCTGTATATCCTTTATACat
tgaaagagaaaaattttcacatttgCAATCTTTTCCACCAAATCTAATCT
CATTGTCCATAAATTGATATCCTCGACaccaccaaaaaaaaaaattctca
aaaagcTTATTGTTTGACAATTCTATGGTTTGACTGATATTATTTATCTA
GTCCATCTTGTTTATAGATATGCACCCGAAATGTTCTTGAGAtatctgat
ttttttctttatagagGATACTTCGGCAGCAATAAACTTACTTCACTTGA
CAAagaataaattattttcattgaagaaaaaagttgatCTGATTGACAGA
AAGTCTCGCACATTAAGTAAAGACAATACTGACGTCACATTGTTCCTCAT
TACACCAACTTATGCTAGATACACACAACAAGCTGATCTTGTTCGTCTAT
CCTACACTTTAAAACATGTTGACAATCTGCATTGGATAGTTGTTGAAGAT
TCTGAGGTTCAAACTAAACTAGtgagaaaagttttaaaagactCTCAAAT
TACATATACACAGTTAAATGTGAAAACTAGAAAAGACTTACAACTTGGTG
AAAATGATCCAAGGTGGAAGAAACATCGTGGTGTGGATCAAAGAAACCAT
GCCTTAGAATGGATCCGTTTGAATGTAGGATGGAATAGAAGAGGCGTTGT
TTACTTTGCCGATGATGACAACACTTATCACTTAGATTTATTTTCAGAGG
TATGTACATGTgaagaaatttaaagaatttctgtctaactatcttctttc
aggagatttgggtggcagagcagcatatgcattttgtctttattaggact
cgtcagcactgcatacacAGTCATAATGTACTCGGTAAAAAGATGGAACT
CCATTCTAAAGAGGTCTTGTAAAAATGCGTTTgcttaaaaatggtagact
ctgAACATATTCAGATCATATTCTGAAATAGGTGAAAGTCTTTTGTTCCT
AAAGGAattttatttgacattatttcatcttttttaccattttttagaca
ttttaaatatatggaatttttacagagcaaataattcttttttggaAGGA
AAtgggtttcaaaaatttttacccGTTTAGAGTTTTGTAAATTGCTTCTC
CCAAGAAAAGGTTCGCTTTTCTAAGgtatatgaattttttttagaaatga
cAATTATATCTTTGTAATGgtcatgttttgaattttttcttcgcTTACAG
ATGCGGACAacaagaaaagtgtcaatttggCCAGTTGCATTAGTAGGTGG
ATTACGATGGGAAGGTCCATTTGTAAGAATGGAAAAGTCGTCAGATTTTT
CACTGCATGGAAGGTCGGCCAGCGGGCTTTTCCTGTTGATATGGCAGCAT
TTGCAGTGAACTTGGATTTGCTAAGAGATAATCATGTTTTGATAAATCCT
CAAGTAGAACGTGGTTTCCTTGAATCCGATTTTTTAGAACAATTAAAGAT
CACACGTGATGACCTAGAAGCTAAGGCAGAAGATTGCTCTAAGGTAAAGA
AATATTTAGGGGTTGCTCTCAAAAGTATGTAGTCTGAGTAGAGAGCACAA
TAACTTACAATATTTACCTCCCAATTTTTCCCTCTGCGCTCCAATCGATC
GGCTCCTTGCCATCGATTAAAATCAACTGACGCTTGATTTTCAACATGAT
GGGTACTTTAGTTGATGATGTATCGGCTGATGCCATAGGTTTAGCCTCAT
TGAAAGATACTTTCATGAGCGACGTGACTAAATTGGATCGGTTATtgcaa
aaagaagaaatacaaTGAAAGCTTCTCTTGAAACTTCCCAAATCTTCTTT
AACTAGATTACTTCATCAAATTTCGTAATTATTTATCCCTAAATGGAAAG
CCGTTTATTACAAAAACCCTTTGTAAAGATGTCATCATTCATTGATCATT
CATTCATTAATATAATTAAATATATCTTTTAAATCTTTTCGGTCAAATAT
TTCTTCTTTGCACTTTAGATATTGACTTATATTTTCCTCTTACCTTTAGA
TCCTTGTATGGCATACTCAAACGGCAAAACCGAAAATGAAGGAAGAGATT
AAGCTAGTGAAACGAAATGGTGTTGGATCAGATTCCAAAATCATTATTTA
A Coding sequence (CDS) from alignment at sc0000135_pilon:164480..167030+ >XLOC_000332 ID=XLOC_000332|Name=XLOC_000332|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1954bp|location=Sequence derived from alignment at sc0000135_pilon:164480..167030+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGATTCCATCGAGAATACAAACAAAGATCCAAATAGGATGTTTTGCTTT
ACTGATATGTGTTTTTCTTTCTATGCTTCATTTTCTTTGTCAGAGAGATG
ATTCCATCGAGAATACAAACAAAGATCCAAATAGGATGTTTTGCTTTACT
GATATGTGTTTTTCTTTCTATGCTTCATTTTCTTTGTCAGAGAGagGATA
CTTCGGCAGCAATAAACTTACTTCACTTGACAAagaataaattattttca
ttgaagaaaaaagttgatCTGATTGACAGAAAGTCTCGCACATTAAGTAA
AGACAATACTGACGTCACATTGTTCCTCATTACACCAACTTATGCTAGAT
ACACACAACAAGCTGATCTTGTTCGTCTATCCTACACTTTAAAACATGTT
GACAATCTGCATTGGATAGTTGTTGAAGATTCTGAGGTTCAAACTAAACT
AGtgagaaaagttttaaaagactCTCAAATTACATATACACAGTTAAATG
TGAAAACTAGAAAAGACTTACAACTTGGTGAAAATGATCCAAGGTGGAAG
AAACATCGTGGTGTGGATCAAAGAAACCATGCCTTAGAATGGATCCGTTT
GAATGTAGGATGGAATAGAAGAGGCGTTGTTTACTTTGCCGATGATGACA
ACACTTATCACTTAGATTTATTTTCAGAGagGATACTTCGGCAGCAATAA
ACTTACTTCACTTGACAAagaataaattattttcattgaagaaaaaagtt
gatCTGATTGACAGAAAGTCTCGCACATTAAGTAAAGACAATACTGACGT
CACATTGTTCCTCATTACACCAACTTATGCTAGATACACACAACAAGCTG
ATCTTGTTCGTCTATCCTACACTTTAAAACATGTTGACAATCTGCATTGG
ATAGTTGTTGAAGATTCTGAGGTTCAAACTAAACTAGtgagaaaagtttt
aaaagactCTCAAATTACATATACACAGTTAAATGTGAAAACTAGAAAAG
ACTTACAACTTGGTGAAAATGATCCAAGGTGGAAGAAACATCGTGGTGTG
GATCAAAGAAACCATGCCTTAGAATGGATCCGTTTGAATGTAGGATGGAA
TAGAAGAGGCGTTGTTTACTTTGCCGATGATGACAACACTTATCACTTAG
ATTTATTTTCAGAGATGCGGACAacaagaaaagtgtcaatttggCCAGTT
GCATTAGTAGGTGGATTACGATGGGAAGGTCCATTTGTAAGAATGGAAAA
GTCGTCAGATTTTTCACTGCATGGAAGGTCGGCCAGCGGGCTTTTCCTGT
TGATATGGCAGCATTTGCAGTGAACTTGGATTTGCTAAGAGATAATCATG
TTTTGATAAATCCTCAAGTAGAACGTGGTTTCCTTGAATCCGATTTTTTA
GAACAATTAAAGATCACACGTGATGACCTAGAAGCTAAGGCAGAAGATTG
CTCTAAGATGCGGACAacaagaaaagtgtcaatttggCCAGTTGCATTAG
TAGGTGGATTACGATGGGAAGGTCCATTTGTAAGAATGGAAAAGTCGTCA
GATTTTTCACTGCATGGAAGGTCGGCCAGCGGGCTTTTCCTGTTGATATG
GCAGCATTTGCAGTGAACTTGGATTTGCTAAGAGATAATCATGTTTTGAT
AAATCCTCAAGTAGAACGTGGTTTCCTTGAATCCGATTTTTTAGAACAAT
TAAAGATCACACGTGATGACCTAGAAGCTAAGGCAGAAGATTGCTCTAAG
ATCCTTGTATGGCATACTCAAACGGCAAAACCGAAAATGAAGGAAGAGAT
TAAGCTAGTGAAACGAAATGGTGTTGGATCAGATTCCAAAATCATTATTT
AAATCCTTGTATGGCATACTCAAACGGCAAAACCGAAAATGAAGGAAGAG
ATTAAGCTAGTGAAACGAAATGGTGTTGGATCAGATTCCAAAATCATTAT
TTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000135_pilon | genome | sc0000135_pilon:164480..167030 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 877-978:2450 |
| Aaloc | 655-876:1722 |
| Aaloc | 583-651:1651 |
| Aaloc | 100-582:667 |
| Aaloc | 1-96:1 |
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