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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000135_pilon:569232..571283+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_000316 ID=XLOC_000316|Name=XLOC_000316|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2052bp|location=Sequence derived from alignment at sc0000135_pilon:569232..571283+ (Clytia hemisphaerica_ch_hm2_pilon)
atgttgaaaaagataACAAGCGAGCCAATCATATTTCTTTATGCCACCGT
GTACATGATCAACTTGTCCATTCTGCCACAGTTggttcttcaaaaagttt
gtttacaaaaacattatggaaattcaactctgtgtggtgAAAAATCTGGG
TTGGCAATCACACAAGAGATGAAGAAGGTAAAATTTCAACACATCTCAAC
TCATATTAGActtagactggcacgccagtcgggctggaacggtatcacgc
gggaaaagtgagcgtaggagttaggtaagcgtaagAAGAAATTCATTTGT
CGGTGGCAAGGGCTGAAATCccttaatcagcagcctctcaccaagtTTTG
ATCGTTCttctacgcagctcctattctagcaaacgcccgctgCCTTTATg
ctcccgccctctgacatgattaattaacagactagtttgctagtctaacT
AGACTATACTCCTggtgggggggggtacttagacaaaattgggtacgggg
acttgttgctggtcagggtcccttttctAGGCTCTGAAGAAATCAGTAAT
AGAGTCCCAAGTTTAATAGTTTTCAAGATTTGTACctgacagggtcaact
tttggttattttgtatgattttcaAGGTGAAATTAgagcatttttcaatt
tttcgtctcAGTAATTTTTGCAACTTTTCAGGTTCCCatatttaccaaac
attcatatcttaCAGGTTCTAGTTTTAAGCTCCAGAGGCattccccgtcg
gccgtcaaggtcttCCCCCGGGCTTATGCTATAGTCTAACACTTTGTCAC
CTTCTGAAAAATAATATCCAAGGCGAAGAAAATTCGTGAACGGGTTTTGC
TTtcaaagcgagtttaaagccgTAGAGTATGCAATGTTGATTAGTCCGAA
AAGGGCGTGCAGGTTGTACAGACAGGGACAGACAGAAACCTACCTAGGCA
AAAGCATAGGCTTTGCAGATATACTGCAAAGATCACGGCACAAAACCCAC
GTCCgatcttttaataaaatatagaaaaatgacACAATCTTGCGCATATC
GAGAATCTTCGCTAAAAATGAGTTTGCGAGTTTGAGGCTCAAATCAAATC
TATCTATCAGGTTTATAAGTCTTGTGTGTTGAAATTTTGTTATTACATTT
CACAATTTTATGATATTATTGAATTTTAGGAAACGTCTCATTGGTGGTTC
GCTATCCTTGCTTCATCTCAAATTCCCGCCATTTTTACCGTTCTCATCTG
GGGACCAATCAGCGACGCGATCGGTCGGAAGAAAGCAATGTTGTTGATTC
CAATAATGAGTATTTTGCAGAATATTGTTTTCCTGTTATGCTCCTATTAT
ATCAATTCTTCGATCAtttatttgtgttttggaatgtttttggcgtgttt
ttttGGAGAATTTCCAGGAGTACTAGCTTTATCCTGTGCATTCATTGCAG
ATGTTACAGCGGGTCTAAAAGCTAAATCTCGAGTCACTAGAATGGCGCTT
ATAGATTGTGCTGTTAATCTAGCTGGGTTACCTGCAGGGCTTTTCGCTGG
TCAGCTTTTAAAACATCTAGGATTCACAGCTGTCTTTGGACTTTCGATCG
GAATCAATCTGTTGTTGTTAGCTTACATCATTTTTCTTTTACCCGACCCA
AGAGCATTACAAAAGGTTCCCAAAGGCAAAGAGCTCAAAGAATCAACATC
TTCGGAAAACAAGAAACTTGTTCCTGCGTCAGCGACGAATGAAAGCATCT
CAGATAACTCAAGCAATGTTTCCAGTAACATTGACAGAGTGCCCGACTCT
TCAAACGATAGCTCCTCAGAGTCTGCAAGTGAATCGCCACCTCAGTTAGA
CAAGAAACCAATCACTTGTGATCTCTTTAAACCGCACAAGCAAATCTACC
TTGTTTACAATCTATTATCGTGCAAAGAAAGGAGACATTTAATTCTACCA
CCCCTGTTTGCATTCAGTTTTGTTATTTACGCTTTTATTGGAGAACTAAC
CATTACGTCATTATATCTCAAAAGTGATCCTCTAGCCTTCACTCCAGACT
AC Coding sequence (CDS) from alignment at sc0000135_pilon:569232..571283+ >XLOC_000316 ID=XLOC_000316|Name=XLOC_000316|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2100bp|location=Sequence derived from alignment at sc0000135_pilon:569232..571283+ (Clytia hemisphaerica_ch_hm2_pilon)
atgttgaaaaagataACAAGCGAGCCAATCATATTTCTTTATGCCACCGT
GTACATGATCAACTTGTCCATTCTGCCACAGTTggttcttcaaaaagttt
gtttacaaaaacattatggaaattcaactctgtgtggtgAAAAATCTGGG
TTGGCAATCACACAAGAGATGAAGAAGatgttgaaaaagataACAAGCGA
GCCAATCATATTTCTTTATGCCACCGTGTACATGATCAACTTGTCCATTC
TGCCACAGTTggttcttcaaaaagtttgtttacaaaaacattatggaaat
tcaactctgtgtggtgAAAAATCTGGGTTGGCAATCACACAAGAGATGAA
GAAGGAAACGTCTCATTGGTGGTTCGCTATCCTTGCTTCATCTCAAATTC
CCGCCATTTTTACCGTTCTCATCTGGGGACCAATCAGCGACGCGATCGGT
CGGAAGAAAGCAATGTTGTTGATTCCAATAATGAGTATTTTGCAGAATAT
TGTTTTCCTGTTATGCTCCTATTATATCAATTCTTCGATCAtttatttgt
gttttggaatgtttttggcgtgtttttttGGAGAATTTCCAGGAGTACTA
GCTTTATCCTGTGCATTCATTGCAGATGTTACAGCGGGTCTAAAAGCTAA
ATCTCGAGTCACTAGAATGGCGCTTATAGATTGTGCTGTTAATCTAGCTG
GGTTACCTGCAGGGCTTTTCGCTGGTCAGCTTTTAAAACATCTAGGATTC
ACAGCTGTCTTTGGACTTTCGATCGGAATCAATCTGTTGTTGTTAGCTTA
CATCATTTTTCTTTTACCCGACCCAAGAGCATTACAAAAGGTTCCCAAAG
GCAAAGAGCTCAAAGAATCAACATCTTCGGAAAACAAGAAACTTGTTCCT
GCGTCAGCGACGAATGAAAGCATCTCAGATAACTCAAGCAATGTTTCCAG
TAACATTGACAGAGTGCCCGACTCTTCAAACGATAGCTCCTCAGAGTCTG
CAAGTGAATCGCCACCTCAGTTAGACAAGAAACCAATCACTTGTGATCTC
TTTAAACCGCACAAGCAAATCTACCTTGTTTACAATCTATTATCGTGCAA
AGAAAGGAGACATTTAATTCTACCACCCCTGTTTGCATTCAGTTTTGTTA
TTTACGCTTTTATTGGAGAACTAACCATTACGTCATTATATCTCAAAAGT
GATCCTCTAGCCTTCACTCCAGACTACGAAACGTCTCATTGGTGGTTCGC
TATCCTTGCTTCATCTCAAATTCCCGCCATTTTTACCGTTCTCATCTGGG
GACCAATCAGCGACGCGATCGGTCGGAAGAAAGCAATGTTGTTGATTCCA
ATAATGAGTATTTTGCAGAATATTGTTTTCCTGTTATGCTCCTATTATAT
CAATTCTTCGATCAtttatttgtgttttggaatgtttttggcgtgttttt
ttGGAGAATTTCCAGGAGTACTAGCTTTATCCTGTGCATTCATTGCAGAT
GTTACAGCGGGTCTAAAAGCTAAATCTCGAGTCACTAGAATGGCGCTTAT
AGATTGTGCTGTTAATCTAGCTGGGTTACCTGCAGGGCTTTTCGCTGGTC
AGCTTTTAAAACATCTAGGATTCACAGCTGTCTTTGGACTTTCGATCGGA
ATCAATCTGTTGTTGTTAGCTTACATCATTTTTCTTTTACCCGACCCAAG
AGCATTACAAAAGGTTCCCAAAGGCAAAGAGCTCAAAGAATCAACATCTT
CGGAAAACAAGAAACTTGTTCCTGCGTCAGCGACGAATGAAAGCATCTCA
GATAACTCAAGCAATGTTTCCAGTAACATTGACAGAGTGCCCGACTCTTC
AAACGATAGCTCCTCAGAGTCTGCAAGTGAATCGCCACCTCAGTTAGACA
AGAAACCAATCACTTGTGATCTCTTTAAACCGCACAAGCAAATCTACCTT
GTTTACAATCTATTATCGTGCAAAGAAAGGAGACATTTAATTCTACCACC
CCTGTTTGCATTCAGTTTTGTTATTTACGCTTTTATTGGAGAACTAACCA
TTACGTCATTATATCTCAAAAGTGATCCTCTAGCCTTCACTCCAGACTAC
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000135_pilon | genome | sc0000135_pilon:569232..571283 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 178-1050:1180 |
| Aaloc | 1-177:1 |
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