XLOC_000282 (mRNA) -

Overview
NameXLOC_000282
Unique NameXLOC_000282
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000135_pilon:92604..95007-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_000282 ID=XLOC_000282|Name=XLOC_000282|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2404bp|location=Sequence derived from alignment at sc0000135_pilon:92604..95007- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAGAGGAGTGATGAGAATCTTGCTCAATTTCCTGAGCTGTCGTTGGAA GTTGTCTTCAAAATCAATTATCATTGGTATGATTATTTTCTTTGGTGGAA ATTATATTATTCTACGATCAATGTTTGCCCGGAATTATACTAATGAAACA AAGGTTGGTCACAGTACTGAAGATGATGGTGTTATTGTTAAGCAGAATGT CTATCATAATAATAGAAAAGACAATACAAATGAATTTATTGAATCTTTAG TTGATAAAAGTCAAAATGTTGGGAATGGGAAAAGTCCACATAAATTTAAC CGTGAAACTGAGGCACCTGTTGGAAATGAAAATCATATTGATGTTAAGAA TGTTGATCATGAAAATAAAAAAGATGGTAAATTTAAAATTGCTTTATTGA TAATTTCTTGTAATCGAGTCGAAGTACGGCGTTGTTTGGATAAGATTTTT GAACACAAACCTAAAGATTATCCGATTGAAATAATTGTCAGTCAAGATTG TGGTCACAAGGCAACAGCAGATGTTATACGGTCGTATGGTGATCGAATCA AGTTTATTCAACAGCCTGATTTAGGCCCAGTTCATGGAGTACCTAACAAC ATGCATCGTTTTATGGGTTATTATAAGATTTCTCGACATTTTCAGTTTGC ACTTGGTAAAGTTTTTGAAATGACGGATAGTGATAGTGTAATTATTGTGG AAGATGATATAGAAATAGGTATGTTTTTATTTACTTTTTACATATATTTT CGAAATCTTTCTAGTTGAGAATTATTAATGCTTCACAACCCTTTAACTGT CGATGTCGGCATATCCCGACATGAGCACTTTCAATTTCTTTGCGGATGTC GGGATTTGCCGACATGGGCACTTTCCATTTCTTTGCCGCAAAATTTAACA CTTCTACAAAGATTTTGTATTAGATGGTTTGAAATGAAAAAAGATAATAG TTAAAAGCTTTTCTATGTTGAAAAAAATAACTATTCAACAATGTTCAACT CAAAATTATAGTCCTTGGCTGATACTTCATATATTATTCAGAAAATGAAG TCAAAATCGCTACCTTTTGCCTATGTCGGCATATGCCGACATCTGGCAAA TAGGTCGAACCTTCTTTTTTTCCCGTGGCAAATAGGTCGAACCTTAAAAA ATACGAACGGCAGTTTAAAGGGATAAAGAGACTAGTTTGAGTAAAGAAAA CGATTTAACACAATTCACTGAATATTGCCATCCTGGATGGCATGAAACTT TGAGTATGAAATTAACTTAAATAGTTTTCTTTACTTAAACTATAAAGCTC TGTTATCATTAACATTGAGCACTGCTATTGGTTTTGGCTTACACAAAGCA GTGCTTCACAAGAGATGTATTTTCATGGGTTTTTGTTACAATTTGAGAGA ATTTACTCTTTCCTGTTGGGTTGGGTGGAGGATATATAATTTTTGAAGTG ATCTACCAGTAAATATTTTGATTTTTCATCGCCTGGACACGTGCCTTACC TTTGGACAAGCATCGACCTCTGAGACACTAAAATGAAATCCATGGAGCAT TAATTCATCTAATCGATAAGGCAATTTCATAAATTTGTTCTATGCTATAT CTTCCATCACCTAATGACGATCCATTTTGGTTTTTAAAATGTGGATTTTC AAGATGTGTAACTGTTTGTCCAAAATAAATTGTTCATATTTATATAAAAT CTATCATTTTTTTTCTTCTTATAGCTTCTGATTTCTTTGATTATTTCTTG GCAACTCGGAAACTTTTAGAAGTTGATAACACTTTGTTTTGTGTGTCTGC TTGGAATGATAATGGGAAAGAAGACTCCGTTGATCCATCTGCTATTGATG TTTTGTACAGGTCTGACTTCTTTCCTGGACTTGGCTGGATGATGACTCGT AAACTTTGGAATGAGATTGGGCCTAACTGGCCTAAAGGTTTTTGGGATGA TTGGATGAGAGATCCTAAACAACGTAAAGATAGATCATGTATAAGACCAG AGATATCACGTACAAAAACCTTTGGACGTATTGGAGTCAGTCAAGGGCAG TTTTATGATCAATATTTAAAATATATCAGACTGAATAATCAAGCTTTTCC ATTTCGTGATTACGATTTGAGTTATTTAATGAAATCAAAATATGATGAAG AATTTTTAGAGAAGGTTTATACAACACCTGAAGTGGACTCCCAACAAGCT ACATCAAAAGGAGCATCAGATGTTCGTATTACTTACAACAATCACTATGA ATTCGAAAACTTTGCAAGACGATTTGGATTAATGTCAGATTTCAAAGCTG GAGTACCTAGAACAGCATATCATGGTGTAGTCACTTTCTTTCGTGGTGGG CATCGCATCTATATAGCTCCACCCAAAAATTGGAAAGGCTACAAAGAGCA TTAA

Coding sequence (CDS) from alignment at sc0000135_pilon:92604..95007-

>XLOC_000282 ID=XLOC_000282|Name=XLOC_000282|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2796bp|location=Sequence derived from alignment at sc0000135_pilon:92604..95007- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAGAGGAGTGATGAGAATCTTGCTCAATTTCCTGAGCTGTCGTTGGAA
GTTGTCTTCAAAATCAATTATCATTGGTATGATTATTTTCTTTGGTGGAA
ATTATATTATTCTACGATCAATGTTTGCCCGGAATTATACTAATGAAACA
AAGGTTGGTCACAGTACTGAAGATGATGGTGTTATTGTTAAGCAGAATGT
CTATCATAATAATAGAAAAGACAATACAAATGAATTTATTGAATCTTTAG
TTGATAAAAGTCAAAATGTTGGGAATGGGAAAAGTCCACATAAATTTAAC
CGTGAAACTGAGGCACCTGTTGGAAATGAAAATCATATTGATGTTAAGAA
TGTTGATCATGAAAATAAAAAAGATGGTAAATTTAAAATTGCTTTATTGA
TAATTTCTTGTAATCGAGTCGAAGTACGGCGTTGTTTGGATAAGATTTTT
GAACACAAACCTAAAGATTATCCGATTGAAATAATTGTCAGTCAAGATTG
TGGTCACAAGGCAACAGCAGATGTTATACGGTCGTATGGTGATCGAATCA
AGTTTATTCAACAGCCTGATTTAGGCCCAGTTCATGGAGTACCTAACAAC
ATGCATCGTTTTATGGGTTATTATAAGATTTCTCGACATTTTCAGTTTGC
ACTTGGTAAAGTTTTTGAAATGACGGATAGTGATAGTGTAATTATTGTGG
AAGATGATATAGAAATAGATGAGAGGAGTGATGAGAATCTTGCTCAATTT
CCTGAGCTGTCGTTGGAAGTTGTCTTCAAAATCAATTATCATTGGTATGA
TTATTTTCTTTGGTGGAAATTATATTATTCTACGATCAATGTTTGCCCGG
AATTATACTAATGAAACAAAGGTTGGTCACAGTACTGAAGATGATGGTGT
TATTGTTAAGCAGAATGTCTATCATAATAATAGAAAAGACAATACAAATG
AATTTATTGAATCTTTAGTTGATAAAAGTCAAAATGTTGGGAATGGGAAA
AGTCCACATAAATTTAACCGTGAAACTGAGGCACCTGTTGGAAATGAAAA
TCATATTGATGTTAAGAATGTTGATCATGAAAATAAAAAAGATGGTAAAT
TTAAAATTGCTTTATTGATAATTTCTTGTAATCGAGTCGAAGTACGGCGT
TGTTTGGATAAGATTTTTGAACACAAACCTAAAGATTATCCGATTGAAAT
AATTGTCAGTCAAGATTGTGGTCACAAGGCAACAGCAGATGTTATACGGT
CGTATGGTGATCGAATCAAGTTTATTCAACAGCCTGATTTAGGCCCAGTT
CATGGAGTACCTAACAACATGCATCGTTTTATGGGTTATTATAAGATTTC
TCGACATTTTCAGTTTGCACTTGGTAAAGTTTTTGAAATGACGGATAGTG
ATAGTGTAATTATTGTGGAAGATGATATAGAAATAGCTTCTGATTTCTTT
GATTATTTCTTGGCAACTCGGAAACTTTTAGAAGTTGATAACACTTTGTT
TTGTGTGTCTGCTTGGAATGATAATGGGAAAGAAGACTCCGTTGATCCAT
CTGCTATTGATGTTTTGTACAGGTCTGACTTCTTTCCTGGACTTGGCTGG
ATGATGACTCGTAAACTTTGGAATGAGATTGGGCCTAACTGGCCTAAAGG
TTTTTGGGATGATTGGATGAGAGATCCTAAACAACGTAAAGATAGATCAT
GTATAAGACCAGAGATATCACGTACAAAAACCTTTGGACGTATTGGAGTC
AGTCAAGGGCAGTTTTATGATCAATATTTAAAATATATCAGACTGAATAA
TCAAGCTTTTCCATTTCGTGATTACGATTTGAGTTATTTAATGAAATCAA
AATATGATGAAGAATTTTTAGAGAAGGTTTATACAACACCTGAAGTGGAC
TCCCAACAAGCTACATCAAAAGGAGCATCAGATGTTCGTATTACTTACAA
CAATCACTATGAATTCGAAAACTTTGCAAGACGATTTGGATTAATGTCAG
ATTTCAAAGCTGGAGTACCTAGAACAGCATATCATGGTGTAGTCACTTTC
TTTCGTGGTGGGCATCGCATCTATATAGCTCCACCCAAAAATTGGAAAGG
CTACAAAGAGCATTAACTTCTGATTTCTTTGATTATTTCTTGGCAACTCG
GAAACTTTTAGAAGTTGATAACACTTTGTTTTGTGTGTCTGCTTGGAATG
ATAATGGGAAAGAAGACTCCGTTGATCCATCTGCTATTGATGTTTTGTAC
AGGTCTGACTTCTTTCCTGGACTTGGCTGGATGATGACTCGTAAACTTTG
GAATGAGATTGGGCCTAACTGGCCTAAAGGTTTTTGGGATGATTGGATGA
GAGATCCTAAACAACGTAAAGATAGATCATGTATAAGACCAGAGATATCA
CGTACAAAAACCTTTGGACGTATTGGAGTCAGTCAAGGGCAGTTTTATGA
TCAATATTTAAAATATATCAGACTGAATAATCAAGCTTTTCCATTTCGTG
ATTACGATTTGAGTTATTTAATGAAATCAAAATATGATGAAGAATTTTTA
GAGAAGGTTTATACAACACCTGAAGTGGACTCCCAACAAGCTACATCAAA
AGGAGCATCAGATGTTCGTATTACTTACAACAATCACTATGAATTCGAAA
ACTTTGCAAGACGATTTGGATTAATGTCAGATTTCAAAGCTGGAGTACCT
AGAACAGCATATCATGGTGTAGTCACTTTCTTTCGTGGTGGGCATCGCAT
CTATATAGCTCCACCCAAAAATTGGAAAGGCTACAAAGAGCATTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_000282XLOC_000282-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000135_pilongenomesc0000135_pilon:92604..95007 -
Properties
Property NameValue
Aaloc721-1398:679
Aaloc1-717:2405