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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000093_pilon:193026..196824- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_000027 ID=XLOC_000027|Name=XLOC_000027|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3799bp|location=Sequence derived from alignment at sc0000093_pilon:193026..196824- (Clytia hemisphaerica_ch_hm2_pilon)
ACCAATGTCAACCAATCACTGACAAGTAAACGAATTGCTGATTCGATTCT
TTTCCTTATCATACATGATTGATTTAACGTCTTTATTTTTACTTTTAAAT
TTTTGAAGTCTTCGGATTTTCTTGACTTTTTGAGTTTTAAGCCCTAAAAT
GTTCTTATAACATGTTCTTATTTTCACCATTTTGGAAGTTTTTTTGTCAA
TTTTCCTCAGAAATTATGTGTTTTAGAGTGCATAAAGTTTTAAAACGTTC
CCAGCTTGTTATTGATATTTTTCCACCAAAGCCAATGTTCTCGTATAGTT
TGCTCTTATAAAAAACGTGTATTTTCAATCATATTCTATCTGTTTTACAT
CAAAATCATTTATTCGACTGCTTCATAAACTTCAATTTTCTTTCCTTTTA
GTTCCACCCAAAATCCTTAGCATCATCAACACAACTGAAGTCACCCAGGG
CGATAGTATTATCTTACAATGTAAAACCCAGGGCAGTCCTGAACCAATCA
CAGTTTGGACATTTGGAGAGAATTTCACCACCATCGCAATAGGATACGGA
AGATCCAAGATGTTACCAGGAGGCGATCTGATGATCACTGAAGCTCAAAT
GCAAGACACTGGTAAGGTTTTTTGTTCTTTTTTTACTTTTTCTTATTTTA
GTTCAGCATTAAAAAAAGGAGGCTATTTTAGCGTTTAACGGTTAATCGGC
TGGATGGTATTCTATTTTGAATGATAAATTTAACTTTAATAATTAGTATT
TACTCGGATATATTGATAGTTAAAGAATTGAAATTATTTTTTCAACAATG
ACAGTTTCATGTCCTATTCAAACAATTTCAGTAAAAATAAAACTCGCATG
TTGATTATTACTGGGATAAAAATTTTGAACTTCGTCGCTATTCAATTACA
CCTTTCTTTTCTTTTTAATGCTTTCTGATTTTTTTTTAATTAATACCGTG
TGATGACTATTTCAATTTCCTTCCCAGGCAAGTACACGTGCATCTCTGGC
AACGTTGGAGGTACAGACACAGCCTCTGGTTATCTCTTGGTCAATGACGT
TGATGAATGTGTGACGGGCAAACATAATTGCTCACATCTCTGTACAAACA
CCTATGGTGGTTTCGAATGCTTTTGTTATCAAGGCTACACCTTATTGGCT
GATCAAAGCACGTGCCAAGGTATATCAAATTCTAATTGGTTCAATGTTTA
ATATTTTGACTTCTAACATAACACGGTAAATGGTGGAATTGCGAATCTGA
AGATTTTCGCGTTGGTTAAAGTTCGCGAGTCAGCGTCTTTTTCAAAAATT
TTTCGAGATCACTAAAGTGCCAAAAATTTGCGAAAATCGCGAAAGTTTAA
GCGTAAAAAATACTGAGAATCAATGATTATTTTGAGGGTAAAAGGCGGAT
TCTTATTGTTCAAACACACTCCTTTAATGAGCCTGGTGATTATATACAAA
GTAATTCTTACCAATAAATTTTTCTCTCGGTTTTTCGTAGATGTGAACGA
ATGTGAGATGTTCAATGATTGTGATCACTTCTGTTGGAACACTGAGGGAA
GTTACACGTGTGGCTGTCGTCATGGTTACCAGCTGCAAGAAGATAACAAA
ATATGTAAAGGTAAACTACGGCTGCTTGATTGTCTACAGTGTGTGAACGA
ACAAATTTTTATGTAAAGCTAAATCATCACATTTCATTATCTAAATTCCC
GGGGGGGCAGCTGGGCAAAAGGATCGACGGGTATGTGCGGGTCCTAAGGG
TACCTTTTCCAATATGTTTAAAATGCACTGTAAGGGTCGGAAAAACTAGA
GATGCACTGTAAGGGTAGAAATTTCAGAAAATTCTTGAAAAATCTAGATA
TTTTGACCAAAAATGCTAGAATTTTGACCATTTTTTGCACGAAAGGGATC
GAAAATTTGGGGGAAAATGCACTCTAAGGGTATGATTTTCACTGATTTTT
GCTGCACTGTAAGGGTGCAATTTTAAAAGCCAATTTTTGGCCCGCACATA
CCGTCAGTCCGCAAACCCAGTGCCCCCCCCCCGGGTCTAAATTGGGCTTA
GAATGATTAAAATAAGATTAAAATTTTCTGCTCAAACAATAGATATTCAA
TTCCAAAGACGATTGAATAGGTTTTTGAGATTAAAATAATCAAGTATGAA
AGTCATGAAATTTGGCATAAATTATGAGGATTTTTTTGGGACCTGCTGTT
TATCTAGATCAGAGTGTTTCAATTACATGGCCAGCTTTTTTTCGGTAGAG
ACATCTTCCGTAAACACCTTCCAAAATGATCATTGGGCCTCAGCTAAAAA
CAGTGGTTTTAGATTCCACACCAATGGAAATCTTTTTTTGAGTTAACCAA
AAAGGTCTTGTGAATTCTTTATTTTATTCTGTATTACTTGAGCCATTTAA
GTCTCCCTGTTTTGAGCAAGGGTTGAAATAAGCTACCAGTTTCTTCTAAG
TCTGAGAAAAAGTTCAAACCTTTTACGATAACCTACTTCTTTACTCATTT
TAAATTCTTTCTCGTAGACATTGATGAATGTACCATGGGAAGTCATCAAT
GTGAACATAACTGCACTAACACCCAGGGCTCATATTTTTGTTCGTGTAAC
CCAGGGTTCAATTTGTCATCAATTGATCACGTGACCTGTAAACGTCGTAA
GTCATTCGTTTGATATTTGACAGAATATAGCTTTAGAAAGTTTATATGAA
TCAGAATCCAAGTCTCATTAAAATACATTGCAGTGCTGTGCAGTGCAAAG
TTTTCCCTGTCAGACGGAACTTGAAATGCAAAAAAAAACAAATATTTACA
TTCGCCCAGAATCTTCGATTTTGCAAAAAATTTAGACGAAAAGACCTCTT
GTTATAGCTTACTGACACGTAGATGCTAACAAAATATTTTTATTGTCTTG
GGATTACCAAAGATCTTCGGAAAAGGGGAGCATATCTTTATCGACTAAGA
GCCTAGAACCTTGGCTATGAAGGACGCAACAACTTTAAGCATAGATTTTG
GACCCTCGCCGTTTATTTGAACCAAGTTGTCCGTCAATGTGAAACCCTCG
CGAAACACTTATATGTAATATTCCAATTTGAGTCATCGAGAGCTAACCGT
AAGCATCTTTTTTGTTACTAGGCAACGAAGAACTAATAAACAAAACAATA
CCTGTTCACCATGGCAACCATACCTTGACAACCAGAAACAACATTCATCC
GCACATGCGCAGTGGGAGAACAACACGTCGTGTTTTACATCTAATCACTA
TCATAACACTTGTGGTGACGTTGATTCTTGTCTCGCTTGCCTTGTACTTA
ATGTGGAGAAATTATAAGAAAAGATGGAGGATGAAAGAGGCAACATCGAA
TATGAATGAACCACCGGTAAGGATACTCTCTTGTTCGTTCATAAAAATAT
AGACTATTCCACATAAACCGGCACTACTGACATTTTGAGGAGATCTTGAT
TTCTGTCAAATGAGTTCTCTGGAAAATCAAAGGGGGTTTGTAAATAGTCC
ACTGGGTCTTTTAAAATTAGCCAGAACCCAAAGGAGGTTTTTGAATCTTG
ATCAAAGAATCTGATTTGGAAATAAAAAGTGCTTTAGCCTCCAGAATATG
ACCGCCTTGGCTTTATTGGTTTCTTTGCGGAAAAGATTTTAAAATATTTT
TTCAGGAAAAGCCAAACTTTTTGGAATGAAAACATAGGATAGGAAAAATC
AATTTTTTGGTGTTTTTGCCTTAAAATCTTAATCATGTTACATTTCATTT
ATTTTTTCAGGTCAGATCAAGATGTTCAGCAATGTTTTCTTGGAAATAA Coding sequence (CDS) from alignment at sc0000093_pilon:193026..196824- >XLOC_000027 ID=XLOC_000027|Name=XLOC_000027|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1914bp|location=Sequence derived from alignment at sc0000093_pilon:193026..196824- (Clytia hemisphaerica_ch_hm2_pilon)
ACCAATGTCAACCAATCACTGACAAACCAATGTCAACCAATCACTGACAA
TTCCACCCAAAATCCTTAGCATCATCAACACAACTGAAGTCACCCAGGGC
GATAGTATTATCTTACAATGTAAAACCCAGGGCAGTCCTGAACCAATCAC
AGTTTGGACATTTGGAGAGAATTTCACCACCATCGCAATAGGATACGGAA
GATCCAAGATGTTACCAGGAGGCGATCTGATGATCACTGAAGCTCAAATG
CAAGACACTGTTCCACCCAAAATCCTTAGCATCATCAACACAACTGAAGT
CACCCAGGGCGATAGTATTATCTTACAATGTAAAACCCAGGGCAGTCCTG
AACCAATCACAGTTTGGACATTTGGAGAGAATTTCACCACCATCGCAATA
GGATACGGAAGATCCAAGATGTTACCAGGAGGCGATCTGATGATCACTGA
AGCTCAAATGCAAGACACTGGCAAGTACACGTGCATCTCTGGCAACGTTG
GAGGTACAGACACAGCCTCTGGTTATCTCTTGGTCAATGACGTTGATGAA
TGTGTGACGGGCAAACATAATTGCTCACATCTCTGTACAAACACCTATGG
TGGTTTCGAATGCTTTTGTTATCAAGGCTACACCTTATTGGCTGATCAAA
GCACGTGCCAAGGCAAGTACACGTGCATCTCTGGCAACGTTGGAGGTACA
GACACAGCCTCTGGTTATCTCTTGGTCAATGACGTTGATGAATGTGTGAC
GGGCAAACATAATTGCTCACATCTCTGTACAAACACCTATGGTGGTTTCG
AATGCTTTTGTTATCAAGGCTACACCTTATTGGCTGATCAAAGCACGTGC
CAAGATGTGAACGAATGTGAGATGTTCAATGATTGTGATCACTTCTGTTG
GAACACTGAGGGAAGTTACACGTGTGGCTGTCGTCATGGTTACCAGCTGC
AAGAAGATAACAAAATATGTAAAGATGTGAACGAATGTGAGATGTTCAAT
GATTGTGATCACTTCTGTTGGAACACTGAGGGAAGTTACACGTGTGGCTG
TCGTCATGGTTACCAGCTGCAAGAAGATAACAAAATATGTAAAGACATTG
ATGAATGTACCATGGGAAGTCATCAATGTGAACATAACTGCACTAACACC
CAGGGCTCATATTTTTGTTCGTGTAACCCAGGGTTCAATTTGTCATCAAT
TGATCACGTGACCTGTAAACACATTGATGAATGTACCATGGGAAGTCATC
AATGTGAACATAACTGCACTAACACCCAGGGCTCATATTTTTGTTCGTGT
AACCCAGGGTTCAATTTGTCATCAATTGATCACGTGACCTGTAAACGCAA
CGAAGAACTAATAAACAAAACAATACCTGTTCACCATGGCAACCATACCT
TGACAACCAGAAACAACATTCATCCGCACATGCGCAGTGGGAGAACAACA
CGTCGTGTTTTACATCTAATCACTATCATAACACTTGTGGTGACGTTGAT
TCTTGTCTCGCTTGCCTTGTACTTAATGTGGAGAAATTATAAGAAAAGAT
GGAGGATGAAAGAGGCAACATCGAATATGAATGAACCACCGGCAACGAAG
AACTAATAAACAAAACAATACCTGTTCACCATGGCAACCATACCTTGACA
ACCAGAAACAACATTCATCCGCACATGCGCAGTGGGAGAACAACACGTCG
TGTTTTACATCTAATCACTATCATAACACTTGTGGTGACGTTGATTCTTG
TCTCGCTTGCCTTGTACTTAATGTGGAGAAATTATAAGAAAAGATGGAGG
ATGAAAGAGGCAACATCGAATATGAATGAACCACCGGTCAGATCAAGATG
TTCAGCAATGTTTTCTTGGAAATAAGTCAGATCAAGATGTTCAGCAATGT
TTTCTTGGAAATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000093_pilon | genome | sc0000093_pilon:193026..196824 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 919-957:40 |
| Aaloc | 676-918:677 |
| Aaloc | 550-672:1281 |
| Aaloc | 430-546:2308 |
| Aaloc | 238-426:2821 |
| Aaloc | 28-234:3397 |
| Aaloc | 1-24:3800 |
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