XLOC_000025 (mRNA) -

Overview
NameXLOC_000025
Unique NameXLOC_000025
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000093_pilon:248410..249525-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_000025 ID=XLOC_000025|Name=XLOC_000025|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1116bp|location=Sequence derived from alignment at sc0000093_pilon:248410..249525- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTTGATTAGAGCTTTCATATGGCAGTTTGTTTTATGGATAGTCTTAAT CGCATGCCAAAAAGGTATTTTGTTTAATTCAATTTCTTTTTCTTCGTCTT TTTTTCCTGGCAAAAAGCTTTGAGAGATCTTTGAGGTACCTGCAAAGCCC TCCAAATGATGAGCTTGCCTTTTGTGAAAATTAGCAGCGATTGAAGTTGT TCAAGAACTGTTTCTTTCCATTTCAAAACAACCACGTTTCATGATTTTTT CCAATTTCCCAAAAAAGTTATGAGTATCCACGATGAAATGGAAAAAAAAC ACAATTATTATAAAAAAGCGTCTAGAGTAGGGTTTGGACCTTTGGAGACA ATGCTATATTTCCTTTTTATAAAAATAATAGCATAACCTGGATGGATTTT GGGATTTTAAAACAATATAAACTATATACAGTGTGTTCGGAGAACGCGGA ACTGATGAATTAATTAAAATCCTTAATGTTCCATACAAATCTTCATGTCT TACTACACACTAGTATTTTTCCCCCTAAACTCGATCCAATCCTTTTTTGA CACCTTTTTCTATTGTCTATAGGAGTGAAAAAAGACTGGGACAGTTTTAG GGTGGTAAAACAGAAAAAATGCCCGCGCGGCAATTGGCAGCTACAGTTGA AAAGGTGTATTAAATAACACTTTGGGAATCGACGACGCTTCAAATCAATG ACGCTTTCGAGGCACACTGTAGACAAAATAAAATTACAGTTTTATATTGT CTTGCTTTAGAAGGGATATCGTGTTATTGCTATATCTAATTAAATTAAAA ACCTCTAGTATCTCTTTCAGGCACAAATGCCAACTCAGTGCGCACACCAA CCAGCACTACGCCGTACGTTTGTGTAGACAGTTCACGTTCGATTGTCAAC TACACTCAATATTATCCAAACCTGATCGAGCAATATTTTGTACCGTCCAT CAAATCGTGTCTATATCTTTGTTGTGAAAATCACCGCTGTAATGGCATTT ATTATGGAGATAACAACAAATGCTATCATGAACCATGTGCAGGATATTGC GGAGATACATCATTTTCCAAGAGAAGCGAGATCACCAAACATAAGCCAGG CGAAGAGGAGGATTTG

Coding sequence (CDS) from alignment at sc0000093_pilon:248410..249525-

>XLOC_000025 ID=XLOC_000025|Name=XLOC_000025|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=720bp|location=Sequence derived from alignment at sc0000093_pilon:248410..249525- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTTGATTAGAGCTTTCATATGGCAGTTTGTTTTATGGATAGTCTTAAT
CGCATGCCAAAAAGATGTTGATTAGAGCTTTCATATGGCAGTTTGTTTTA
TGGATAGTCTTAATCGCATGCCAAAAAGGCACAAATGCCAACTCAGTGCG
CACACCAACCAGCACTACGCCGTACGTTTGTGTAGACAGTTCACGTTCGA
TTGTCAACTACACTCAATATTATCCAAACCTGATCGAGCAATATTTTGTA
CCGTCCATCAAATCGTGTCTATATCTTTGTTGTGAAAATCACCGCTGTAA
TGGCATTTATTATGGAGATAACAACAAATGCTATCATGAACCATGTGCAG
GATATTGCGGAGATACATCATTTTCCAAGAGAAGCGAGATCACCAAACAT
AAGCCAGGCGAAGAGGAGGATTTGGCACAAATGCCAACTCAGTGCGCACA
CCAACCAGCACTACGCCGTACGTTTGTGTAGACAGTTCACGTTCGATTGT
CAACTACACTCAATATTATCCAAACCTGATCGAGCAATATTTTGTACCGT
CCATCAAATCGTGTCTATATCTTTGTTGTGAAAATCACCGCTGTAATGGC
ATTTATTATGGAGATAACAACAAATGCTATCATGAACCATGTGCAGGATA
TTGCGGAGATACATCATTTTCCAAGAGAAGCGAGATCACCAAACATAAGC
CAGGCGAAGAGGAGGATTTG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_000025XLOC_000025-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000093_pilongenomesc0000093_pilon:248410..249525 -
Properties
Property NameValue
Aaloc67-360:295
Aaloc1-63:1117