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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000236_pilon:22520..25835+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.19921.1.p1 ID=MSTRG.19921.1.p1|Name=MSTRG.19921.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3316bp|location=Sequence derived from alignment at sc0000236_pilon:22520..25835+ (Clytia hemisphaerica_ch_hm2_pilon)
TAAAAAGACCGATCCAAAAAGCATGAGTCAAGCTTCAACGAAAACAATGC
GTGAATTCTTTGGGGGCAAACAACCTTCAACCTCTACCACCTTCAACTTA
TCATCTCAATCAAAGCAAGCATCAAAAATAACCACAGACGAAACAATTGT
CGATTTCACACCAGAAATCGATTTAACTAATGATCAAGTGGTCCAAAACA
ATGAGGCTGGTTCAAAAAACTTGCAGCTGCCCGTTGGTCATCTCGTGAAT
ACAGAAACCAGCGGGCACTAATGAAAGCCTCTTTAGATTGTCATAAAATT
ACCAACTATTTCGACATCGACAATCTTTCAGAAAGAGTTGACAGTATCGA
TGAGATTCGAGCTCACGTCAACCGGTCTATTGGTACAGAAGAAACAAGAA
GCATTGCCCCGCTCCTGAAGCGCTTATACGAAAATGCGGTGAAAAATGCG
AAGTCCGAAGCAAAAGGTCATCGTCATGACACGCTTATTAAACAATTTGC
TTCTTCACTTGTGTGTCTCATTGGCCCTGCAGGTTATGAAATGATTCAGG
CTAATTTTGGTTGCGGCTTACCACACATATCGACTGCTCGGAGATCagta
caaaaacaaagaaaaattgtcGAAGGTGAATTTTACTTTAATGAGCTGAA
GAATCATCTTCAAAAATGGCAAGCACCATTATTTATCAACGTCCAATTAG
ATGATACACGAACCATCAATAAGGTCGAGTATGACCCTTCAACAGATCGC
TTTGTTGGGTTTTGTTTACCATTGAAAAATGGTCTTCCCATAGGAGATGC
TTTCCAACTACAAACTTTTGAAAGTATCAAGACAGCCATTGAAAACGAAA
CCGTTGGCAAGTATGCACATTGTATTGTGGCTAAGTCTGTAAAAGCAGGT
GTACCATCATTTGTCCTTTTCAGCTTAGCAACTGATGCTAAGTACGATCA
TACTATAATCTTGAAACGCTGGAACCACATTGAGAAAGGATTGAAGGAAA
TTGGTCTTACCGTATTAAGTAATGGTGCTGACGGAGCTGGTCCTTTTCTT
AAGGCAATGACCATAAAAACGCAACTTTTCAGTCGAGCTTACGATAACAC
TTTACCAAACTACTGGACCTTTTTCTGGATGCCAAAGTTGCTGGAAGATT
CGTTAGTTTGCCAAGACACGGTGCATCTTCTTGCCAAACTTAGAACGCGA
CTCCTTACACCGTCGAACCTAATCGTCTTGGGCAGTGAAACGGCTTGCCG
TGGTCATCTTGAACACGTATTAGATGACTTTTCCAAAGAGGATCATGGAT
TATCAGCGCAAGTATTGcaaaacaaagataaacaaaattatCAGAGTGTG
GAAACATTGTTGAGTGATGGAGTTGAAAACTGTCTAAAGAAActatcaat
aaaatcaaaaatccaaACTAAGGGTACCATCACATATCTATGGCTAATGA
GAAACATCAAGGAAGCATTTTTCAATAAAGCACTATCACCTGTAGAACGT
ATCCATTTGATTTGGCAAACCAtttttttCCTACGTATTTGGAGACTTTG
GCTGAAGGCAAACACCTACAACGAACAGGATCATTTCATCACGCAAAACG
CATATGTTTGTACCGAGCTTAACGGCCATTTGCTCATCAACCTTGTCCAC
AATGTCATCACTGGTAAATTCCCAAAAGAAGCTCTCCGTGTTTGGACATG
TGGATCACAATCTTGTGAGCAAACCTTTCGATTGCTACGTTCAATGACTT
CCACGTTCTCAACTATCGTAAACTTTTCCATGAAAGGTAAGTGTGACTTT
ATTAGCCCAAAATGatttatctgaaaaaaaaatgctaTCTTCATGTTATT
GTGTACATCCTTATACTTTCCACATACAATTCAGAATTTCAGTTCTCTGT
TTCTACAGCAAAGTCAAATTTGGCTCTAACTCTAAAACTTATCTTTTAGG
AATCCTTGAACGAATGCACAAGCTACATTACCTATCTACGGTTGAAGCAT
CAGAAGAAATCATCTTCCCTAGAGTTAAACGTAGACTCTTGCAAACAAGA
GAGGAAACTGAGGTGACTCTTCAAATACCAACAGTTGCTGAGATAGATGA
TAGCATATTCAGAGCCAGGTAAAATGATTAAGTCGTGGGATCAAAGAGGT
TTGACTGATGCATTTACGGGACCTTTTGCGTGAAGGCACGATCTATGATT
TCAAGCGTGATCCATAaattaaaagataatttttttagtGTGATAGCGTG
TATTATTTACAGAATGACTTACAGAATTAACAAGGAAGTAATAGTTCCCC
GCTAGGATGTCGGGCGATTATTaattttctatatatttttaaaagttttt
agctCTAAAGTGTACTTGGATGAACATTTGTAATTTCCTGTAAGAGGCCT
TTATTAGGTACTGAGagtaatttgaaatgtttctcTCCCTCAGATACGAA
GCTCTAACGAGGGCAAGGGAATGTGGAATCACACTTCAAAAGTATGGAGA
TGAGCACCTTTTATTTCCATCTAATGAAGCATTGATACAATCTGCAGTTG
ACAACGACCACGAAGGGGAAGACATCGAAATCGCGCCAACAGCACAACAA
GATGGTATTACAACTGAGGAAGCCATCACAATAAACGAGGATATCCTCAA
CATCAACCTTGTCAAAAAACGAAGCACTGGGGTACCTGTCTATGCTGAGC
AAAGCGATAAATCAGGACGAAACTATTCATTGATGAACAGTCTTGGCAAA
TCCCAGTTCATTCGCTATAACGGAGCATTTATACGGAAGTCGACAGCTCT
TTATTTGCTTCAAGaaaaaaaGCAACTTTCAAATGATCGCCTTCTTAGAG
TACGTGCTTCTCAGCCTAGGCATTTGTTTAATGGTGAGGGTGAAAGAGAA
AGTGAACAACAGCAGATTGTAAGATCCGGTGATTTGTGCCTTTTTCGAAG
GACAGATTCAGAAAAAAGTTTGATCGGAAGAATCATCCAATTTTCTTACC
TGGAGGGGAGTAAAAAGGAGAGGCAATACTCCAGCTCGTATGTGGATATG
TCTCTCGATAGCTATAAGAAAATTGGAGTATTTGCAAATTGGTATCACGT
AAAATCACCAATCGTGTCTAGTAGCGTTTCTTTTGTCCCTAATGAGACTT
TCACAACGGGATATTTATCAATGGAGAATTACATATCATCGATCAAAGAG
TCAATCCTGGAGGATAATGGAGAAGCTTCGTTTACTATTAGTAAAGATAA
TCTGAAAAAGATTGACCCAAACTGGTCAAAAACATTCACTTTTGATCAAG
AATTTTTTGATCATGA Coding sequence (CDS) from alignment at sc0000236_pilon:22520..25835+ >MSTRG.19921.1.p1 ID=MSTRG.19921.1.p1|Name=MSTRG.19921.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=7668bp|location=Sequence derived from alignment at sc0000236_pilon:22520..25835+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAAGCCTCTTTAGATTGTCATAAAATTACCAACTATTTCGACATCGA
CAATCTTTCAGAAAGAGTTGACAGTATCGATGAGATTCGAGCTCACGTCA
ACCGGTCTATTGGTACAGAAGAAACAAGAAGCATTGCCCCGCTCCTGAAG
CGCTTATACGAAAATGCGGTGAAAAATGCGAAGTCCGAAGCAAAAGGTCA
TCGTCATGACACGCTTATTAAACAATTTGCTTCTTCACTTGTGTGTCTCA
TTGGCCCTGCAGGTTATGAAATGATTCAGGCTAATTTTGGTTGCGGCTTA
CCACACATATCGACTGCTCGGAGATCagtacaaaaacaaagaaaaattgt
cGAAGGTGAATTTTACTTTAATGAGCTGAAGAATCATCTTCAAAAATGGC
AAGCACCATTATTTATCAACGTCCAATTAGATGATACACGAACCATCAAT
AAGGTCGAGTATGACCCTTCAACAGATCGCTTTGTTGGGTTTTGTTTACC
ATTGAAAAATGGTCTTCCCATAGGAGATGCTTTCCAACTACAAACTTTTG
AAAGTATCAAGACAGCCATTGAAAACGAAACCGTTGGCAAGTATGCACAT
TGTATTGTGGCTAAGTCTGTAAAAGCAGGTGTACCATCATTTGTCCTTTT
CAGCTTAGCAACTGATGCTAAGTACGATCATACTATAATCTTGAAACGCT
GGAACCACATTGAGAAAGGATTGAAGGAAATTGGTCTTACCGTATTAAGT
AATGGTGCTGACGGAGCTGGTCCTTTTCTTAAGGCAATGACCATAAAAAC
GCAACTTTTCAGTCGAGCTTACGATAACACTTTACCAAACTACTGGACCT
TTTTCTGGATGCCAAAGTTGCTGGAAGATTCGTTAGTTTGCCAAGACACG
GTGCATCTTCTTGCCAAACTTAGAACGCGACTCCTTACACCGTCGAACCT
AATCGTCTTGGGCAGTGAAACGGCTTGCCGTGGTCATCTTGAACACGTAT
TAGATGACTTTTCCAAAGAGGATCATGGATTATCAGCGCAAGTATTGcaa
aacaaagataaacaaaattatCAGAGTGTGGAAACATTGTTGAGTGATGG
AGTTGAAAACTGTCTAAAGAAActatcaataaaatcaaaaatccaaACTA
AGGGTACCATCACATATCTATGGCTAATGAGAAACATCAAGGAAGCATTT
TTCAATAAAGCACTATCACCTGTAGAACGTATCCATTTGATTTGGCAAAC
CAtttttttCCTACGTATTTGGAGACTTTGGCTGAAGGCAAACACCTACA
ACGAACAGGATCATTTCATCACGCAAAACGCATATGTTTGTACCGAGCTT
AACGGCCATTTGCTCATCAACCTTGTCCACAATGTCATCACTGGTAAATT
CCCAAAAGAAGCTCTCCGTGTTTGGACATGTGGATCACAATCTTGTGAGC
AAACCTTTCGATTGCTACGTTCAATGACTTCCACGTTCTCAACTATCGTA
AACTTTTCCATGAAAGGAATCCTTGAACGAATGCACAAGCTACATTACCT
ATCTACGGTTGAAGCATCAGAAGAAATCATCTTCCCTAGAGTTAAACGTA
GACTCTTGCAAACAAGAGAGGAAACTGAGGTGACTCTTCAAATACCAACA
GTTGCTGAGATAGATGATAGCATATTCAGAGCCAGATACGAAGCTCTAAC
GAGGGCAAGGGAATGTGGAATCACACTTCAAAAGTATGGAGATGAGCACC
TTTTATTTCCATCTAATGAAGCATTGATACAATCTGCAGTTGACAACGAC
CACGAAGGGGAAGACATCGAAATCGCGCCAACAGCACAACAAGATGGTAT
TACAACTGAGGAAGCCATCACAATAAACGAGGATATCCTCAACATCAACC
TTGTCAAAAAACGAAGCACTGGGGTACCTGTCTATGCTGAGCAAAGCGAT
AAATCAGGACGAAACTATTCATTGATGAACAGTCTTGGCAAATCCCAGTT
CATTCGCTATAACGGAGCATTTATACGGAAGTCGACAGCTCTTTATTTGC
TTCAAGaaaaaaaGCAACTTTCAAATGATCGCCTTCTTAGAGTACGTGCT
TCTCAGCCTAGGCATTTGTTTAATGGTGAGGGTGAAAGAGAAAGTGAACA
ACAGCAGATTGTAAGATCCGGTGATTTGTGCCTTTTTCGAAGGACAGATT
CAGAAAAAAGTTTGATCGGAAGAATCATCCAATTTTCTTACCTGGAGGGG
AGTAAAAAGGAGAGGCAATACTCCAGCTCGTATGTGGATATGTCTCTCGA
TAGCTATAAGAAAATTGGAGTATTTGCAAATTGGTATCACGTAAAATCAC
CAATCGTGTCTAGTAGCGTTTCTTTTGTCCCTAATGAGACTTTCACAACG
GGATATTTATCAATGGAGAATTACATATCATCGATCAAAGAGTCAATCCT
GGAGGATAATGGAGAAGCTTCGTTTACTATTAGTAAAGATAATCTGAAAA
AGATTGACCCAAACTGGTCAAAAACATTCACTTTTGATCAAGAATTTTTT
GATCATATGAAAGCCTCTTTAGATTGTCATAAAATTACCAACTATTTCGA
CATCGACAATCTTTCAGAAAGAGTTGACAGTATCGATGAGATTCGAGCTC
ACGTCAACCGGTCTATTGGTACAGAAGAAACAAGAAGCATTGCCCCGCTC
CTGAAGCGCTTATACGAAAATGCGGTGAAAAATGCGAAGTCCGAAGCAAA
AGGTCATCGTCATGACACGCTTATTAAACAATTTGCTTCTTCACTTGTGT
GTCTCATTGGCCCTGCAGGTTATGAAATGATTCAGGCTAATTTTGGTTGC
GGCTTACCACACATATCGACTGCTCGGAGATCagtacaaaaacaaagaaa
aattgtcGAAGGTGAATTTTACTTTAATGAGCTGAAGAATCATCTTCAAA
AATGGCAAGCACCATTATTTATCAACGTCCAATTAGATGATACACGAACC
ATCAATAAGGTCGAGTATGACCCTTCAACAGATCGCTTTGTTGGGTTTTG
TTTACCATTGAAAAATGGTCTTCCCATAGGAGATGCTTTCCAACTACAAA
CTTTTGAAAGTATCAAGACAGCCATTGAAAACGAAACCGTTGGCAAGTAT
GCACATTGTATTGTGGCTAAGTCTGTAAAAGCAGGTGTACCATCATTTGT
CCTTTTCAGCTTAGCAACTGATGCTAAGTACGATCATACTATAATCTTGA
AACGCTGGAACCACATTGAGAAAGGATTGAAGGAAATTGGTCTTACCGTA
TTAAGTAATGGTGCTGACGGAGCTGGTCCTTTTCTTAAGGCAATGACCAT
AAAAACGCAACTTTTCAGTCGAGCTTACGATAACACTTTACCAAACTACT
GGACCTTTTTCTGGATGCCAAAGTTGCTGGAAGATTCGTTAGTTTGCCAA
GACACGGTGCATCTTCTTGCCAAACTTAGAACGCGACTCCTTACACCGTC
GAACCTAATCGTCTTGGGCAGTGAAACGGCTTGCCGTGGTCATCTTGAAC
ACGTATTAGATGACTTTTCCAAAGAGGATCATGGATTATCAGCGCAAGTA
TTGcaaaacaaagataaacaaaattatCAGAGTGTGGAAACATTGTTGAG
TGATGGAGTTGAAAACTGTCTAAAGAAActatcaataaaatcaaaaatcc
aaACTAAGGGTACCATCACATATCTATGGCTAATGAGAAACATCAAGGAA
GCATTTTTCAATAAAGCACTATCACCTGTAGAACGTATCCATTTGATTTG
GCAAACCAtttttttCCTACGTATTTGGAGACTTTGGCTGAAGGCAAACA
CCTACAACGAACAGGATCATTTCATCACGCAAAACGCATATGTTTGTACC
GAGCTTAACGGCCATTTGCTCATCAACCTTGTCCACAATGTCATCACTGG
TAAATTCCCAAAAGAAGCTCTCCGTGTTTGGACATGTGGATCACAATCTT
GTGAGCAAACCTTTCGATTGCTACGTTCAATGACTTCCACGTTCTCAACT
ATCGTAAACTTTTCCATGAAAGGAATCCTTGAACGAATGCACAAGCTACA
TTACCTATCTACGGTTGAAGCATCAGAAGAAATCATCTTCCCTAGAGTTA
AACGTAGACTCTTGCAAACAAGAGAGGAAACTGAGGTGACTCTTCAAATA
CCAACAGTTGCTGAGATAGATGATAGCATATTCAGAGCCAGATACGAAGC
TCTAACGAGGGCAAGGGAATGTGGAATCACACTTCAAAAGTATGGAGATG
AGCACCTTTTATTTCCATCTAATGAAGCATTGATACAATCTGCAGTTGAC
AACGACCACGAAGGGGAAGACATCGAAATCGCGCCAACAGCACAACAAGA
TGGTATTACAACTGAGGAAGCCATCACAATAAACGAGGATATCCTCAACA
TCAACCTTGTCAAAAAACGAAGCACTGGGGTACCTGTCTATGCTGAGCAA
AGCGATAAATCAGGACGAAACTATTCATTGATGAACAGTCTTGGCAAATC
CCAGTTCATTCGCTATAACGGAGCATTTATACGGAAGTCGACAGCTCTTT
ATTTGCTTCAAGaaaaaaaGCAACTTTCAAATGATCGCCTTCTTAGAGTA
CGTGCTTCTCAGCCTAGGCATTTGTTTAATGGTGAGGGTGAAAGAGAAAG
TGAACAACAGCAGATTGTAAGATCCGGTGATTTGTGCCTTTTTCGAAGGA
CAGATTCAGAAAAAAGTTTGATCGGAAGAATCATCCAATTTTCTTACCTG
GAGGGGAGTAAAAAGGAGAGGCAATACTCCAGCTCGTATGTGGATATGTC
TCTCGATAGCTATAAGAAAATTGGAGTATTTGCAAATTGGTATCACGTAA
AATCACCAATCGTGTCTAGTAGCGTTTCTTTTGTCCCTAATGAGACTTTC
ACAACGGGATATTTATCAATGGAGAATTACATATCATCGATCAAAGAGTC
AATCCTGGAGGATAATGGAGAAGCTTCGTTTACTATTAGTAAAGATAATC
TGAAAAAGATTGACCCAAACTGGTCAAAAACATTCACTTTTGATCAAGAA
TTTTTTGATCATATGAAAGCCTCTTTAGATTGTCATAAAATTACCAACTA
TTTCGACATCGACAATCTTTCAGAAAGAGTTGACAGTATCGATGAGATTC
GAGCTCACGTCAACCGGTCTATTGGTACAGAAGAAACAAGAAGCATTGCC
CCGCTCCTGAAGCGCTTATACGAAAATGCGGTGAAAAATGCGAAGTCCGA
AGCAAAAGGTCATCGTCATGACACGCTTATTAAACAATTTGCTTCTTCAC
TTGTGTGTCTCATTGGCCCTGCAGGTTATGAAATGATTCAGGCTAATTTT
GGTTGCGGCTTACCACACATATCGACTGCTCGGAGATCagtacaaaaaca
aagaaaaattgtcGAAGGTGAATTTTACTTTAATGAGCTGAAGAATCATC
TTCAAAAATGGCAAGCACCATTATTTATCAACGTCCAATTAGATGATACA
CGAACCATCAATAAGGTCGAGTATGACCCTTCAACAGATCGCTTTGTTGG
GTTTTGTTTACCATTGAAAAATGGTCTTCCCATAGGAGATGCTTTCCAAC
TACAAACTTTTGAAAGTATCAAGACAGCCATTGAAAACGAAACCGTTGGC
AAGTATGCACATTGTATTGTGGCTAAGTCTGTAAAAGCAGGTGTACCATC
ATTTGTCCTTTTCAGCTTAGCAACTGATGCTAAGTACGATCATACTATAA
TCTTGAAACGCTGGAACCACATTGAGAAAGGATTGAAGGAAATTGGTCTT
ACCGTATTAAGTAATGGTGCTGACGGAGCTGGTCCTTTTCTTAAGGCAAT
GACCATAAAAACGCAACTTTTCAGTCGAGCTTACGATAACACTTTACCAA
ACTACTGGACCTTTTTCTGGATGCCAAAGTTGCTGGAAGATTCGTTAGTT
TGCCAAGACACGGTGCATCTTCTTGCCAAACTTAGAACGCGACTCCTTAC
ACCGTCGAACCTAATCGTCTTGGGCAGTGAAACGGCTTGCCGTGGTCATC
TTGAACACGTATTAGATGACTTTTCCAAAGAGGATCATGGATTATCAGCG
CAAGTATTGcaaaacaaagataaacaaaattatCAGAGTGTGGAAACATT
GTTGAGTGATGGAGTTGAAAACTGTCTAAAGAAActatcaataaaatcaa
aaatccaaACTAAGGGTACCATCACATATCTATGGCTAATGAGAAACATC
AAGGAAGCATTTTTCAATAAAGCACTATCACCTGTAGAACGTATCCATTT
GATTTGGCAAACCAtttttttCCTACGTATTTGGAGACTTTGGCTGAAGG
CAAACACCTACAACGAACAGGATCATTTCATCACGCAAAACGCATATGTT
TGTACCGAGCTTAACGGCCATTTGCTCATCAACCTTGTCCACAATGTCAT
CACTGGTAAATTCCCAAAAGAAGCTCTCCGTGTTTGGACATGTGGATCAC
AATCTTGTGAGCAAACCTTTCGATTGCTACGTTCAATGACTTCCACGTTC
TCAACTATCGTAAACTTTTCCATGAAAGGAATCCTTGAACGAATGCACAA
GCTACATTACCTATCTACGGTTGAAGCATCAGAAGAAATCATCTTCCCTA
GAGTTAAACGTAGACTCTTGCAAACAAGAGAGGAAACTGAGGTGACTCTT
CAAATACCAACAGTTGCTGAGATAGATGATAGCATATTCAGAGCCAGATA
CGAAGCTCTAACGAGGGCAAGGGAATGTGGAATCACACTTCAAAAGTATG
GAGATGAGCACCTTTTATTTCCATCTAATGAAGCATTGATACAATCTGCA
GTTGACAACGACCACGAAGGGGAAGACATCGAAATCGCGCCAACAGCACA
ACAAGATGGTATTACAACTGAGGAAGCCATCACAATAAACGAGGATATCC
TCAACATCAACCTTGTCAAAAAACGAAGCACTGGGGTACCTGTCTATGCT
GAGCAAAGCGATAAATCAGGACGAAACTATTCATTGATGAACAGTCTTGG
CAAATCCCAGTTCATTCGCTATAACGGAGCATTTATACGGAAGTCGACAG
CTCTTTATTTGCTTCAAGaaaaaaaGCAACTTTCAAATGATCGCCTTCTT
AGAGTACGTGCTTCTCAGCCTAGGCATTTGTTTAATGGTGAGGGTGAAAG
AGAAAGTGAACAACAGCAGATTGTAAGATCCGGTGATTTGTGCCTTTTTC
GAAGGACAGATTCAGAAAAAAGTTTGATCGGAAGAATCATCCAATTTTCT
TACCTGGAGGGGAGTAAAAAGGAGAGGCAATACTCCAGCTCGTATGTGGA
TATGTCTCTCGATAGCTATAAGAAAATTGGAGTATTTGCAAATTGGTATC
ACGTAAAATCACCAATCGTGTCTAGTAGCGTTTCTTTTGTCCCTAATGAG
ACTTTCACAACGGGATATTTATCAATGGAGAATTACATATCATCGATCAA
AGAGTCAATCCTGGAGGATAATGGAGAAGCTTCGTTTACTATTAGTAAAG
ATAATCTGAAAAAGATTGACCCAAACTGGTCAAAAACATTCACTTTTGAT
CAAGAATTTTTTGATCAT
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000236_pilon | genome | sc0000236_pilon:22520..25835 + |
|
