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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000234_pilon:553373..560060+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.19882.2.p1 ID=MSTRG.19882.2.p1|Name=MSTRG.19882.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=6688bp|location=Sequence derived from alignment at sc0000234_pilon:553373..560060+ (Clytia hemisphaerica_ch_hm2_pilon)
ATCCATCAGGACCTTCCTCCTGTCTAGTTTGCAAAGAATGGCACATTTGC
TTGCTCAAGATCTCGAGTGCATAACTCGGAAAAAGTTGAGTGcaattcgt
ttgatattcgtttgatattctcaaatttgtgTTTTACACAACatactcta
ttggcttccaatagtttgcAGACCCAAACTTAACCGCTTCACACACAGAG
GCCCAAGTTGTCATATTCGCATAATTAAGATTTTGCGGTGTAGCAATTTT
AGAGAGAGCACACTGTTTTTGTGACTacttttggaattggaaactatttg
AAGCCAATAGAGTATGTTACCAAGAAGAGTAATTGTGTAAAATTTGACCA
CTCAACCAGCAAAAATCGCCAGTGAGACCAATTGAGGCctctacattttt
ttttttggacctaccccggtggaggtcctataaattaacctgtgtttgtt
cgtccgtttgtccgtccgttccttcgttcgttcgtctgttaccaactttt
ctcaggattgaatgaTAGGAATCTTTGGTGGTCTAAAATGGTggtaccca
aaatgtgacggagcctgattttcgaaaaaaaaaattttggggcaaatttg
ggccAaaaaacagctaaaaaacgggttttttagactttatgaaaaattgg
atcattaattttttctgattttttgtatgaaagtagggtaccatagttaa
aagatggctcaagcagatttttgcaaaaaaattttgttggctcaaaaaaa
gcatgtttatctataagaatcactattaacaagcatacatcaatgttctt
agtcaaattactgaatttttttatgagatagatgttttttttgctcacga
gggcttacatttgaagcatatgtgtgtttagacatgaaattttggttgct
tggcgtgtttttatataaaaactggccaaattcgatatttttttataagc
acattatcaattacttaggtattagcttttctcgagattggctctttcat
tcttaatgattttttgcacaaagatgcataactttaaacccttatttgtg
acggagcctgattttcgaaaaaaaatgtttttgggcaaattttggccaaa
aacggctaaaaaaaaggttttttggactttgtgaaaaattgaatcattgt
ttttttttctgattttttacatgaaagtaggtaaaagatggctcaagcag
atttttataaaaaaagaatttttcagctcgaAAAAGGCATCTTTATTACA
AGAATCAcaattaataagcatacatcaatgttctcggtaaaaacattgtg
aattttgatatcagaaATATCGGGAGGTCGTCAGTAGTCCGACACTTTCT
AGTCCGACAGTAAAAATGTCCGACGTTGGATTTGACGAAAGTGTCAGTAT
TCCGACAACAATTTTGTCCGACAACGAGTCaaaaaaaaacatataaaaat
cgaaatatgaatcgTGGAAGAGGAAACACATTTTTTCCTAATTTGAGGTT
AGGCCCCTAAACCCGACTTGTcttaaattttggaaagcttgttaggatta
ggctttcaagagtcaagagattggatttagctgtttttacgacccttctt
tagtgatttacaaccctgattggtcctttatttctactTATGCCAAAATG
TCgccaaaataaacttttattaatattatctcagagaaaaacccttattc
aacattcgacactctaaaatcttgcgttttcggacaaaagtgacgtcgga
aaaaaagacttccaaattgtaaatttattttatagattcggactatttta
ctgtcggactagaaaatgtcggactagtgacatgcacccgaaATATCAAC
GATgtaacttcattttatttttattttacttgacaatatatttcgataCT
TTTTCGATactacatcaatgttcttagccaaattactcaattttttaatg
agatagatgtttttttttgctcacaaagtcttgaatatgaaagattattt
caagaacatgaaattttggtttctaaacattttttttataacaaacaaac
gactaattttgatagatcgtcactatttgtgttctgaatgattatTTAAC
GGTCATgatcacgtagatatcaattatatttgttaaatgcataaccaggt
aggtccataaaagtatcacttgttttttttttatttattctttatttaga
gTATAGGGTACtaaaaaatctagattttacaAATGAATGTAAAGTCTAAT
TAACAACAGTCTAATTACAGCCCTCCAAAGCCCCCCATAGCCCTTCGCAC
CCCTTCAgataccctctgccttgctctGCCTCAAAGCCAGCATCTTCCAT
TAGTGCTCcaaagcctttaaaaggcttgaaaattggcgaaaattggtcaa
aattagaaaaaatgacctcctttgggtaccaccTGGTACcaccgtggacg
gcccctggAGGTCCCGGCCTAGGTTTCGGGGAGTTCGattggtgcccact
ggtcagggtgTGAGGGTACACGTCTGCACCAGCGAgggtgcttcaaagtt
cctcaaagtgtcgtcAATGGCCGGCAAAAAGTGCGACCAAATTACGTGCA
TGTGGAGCCTTCAGTTGCtcgggttttctcaaatttttgtttgattaaac
ttgacaaaattcgattaagttcaattagtttgattaagtttgattaatgT
AATCAAACTAAACGAACTATCcaggtctctttaaaaaaattaatcaaact
taatcgaactttgtattttgagaaatttgtgaatattcgattaaagttca
acaaccgaacttagtcgaacattaatcggccaacaaagttcgattaagtt
cgacaaagctcgattaaaaataccatttgattagttcgattaattacgtc
tggtttCAGGTGCAAGTTCAGATggtttcggatttttaaaagtaattttt
tcaatttttcgttgctcaataacatgaaaagttctaaaataatatgttaa
aagatcctgcatcgatgccgaaacacagacAGAAAGtgataacaaaaccc
ccgttgtaaatttgtttacacatGACTTGATTTTGCTCCcaattttgcta
tctgcatttccaacaaaaaccagttgaaaacaaaactaaacaagGCAATG
TGGGCCTACTTATTGCGAGgttgtcaaataccacgtgttcaataataaaa
tcaatttttatttccaaaaacagGTCAGCCAGGGCGGGCAggctaggggg
ggggggggtccagcCATGTTTAAATAACTTGGTTAGGTATTCAGAattaa
ggattagggattcgcaattagggattagggattcgcaattaaggattagg
gattCAGACAAATTTCCATGGTTTTGAGCTGCTACTGTTTTCTACTTTAA
ATATTGAGTTTGAATTCAGTTCAAtacttcaaagaaaaataaccAACCTA
GGCTCTGTTTAATTAAGTtgggaactatttaaaaaaaaaagagttaacCT
CAGAATGGGCTTTTTCTGTTAATAAGGGCCTGTAAAGCAACTAATCAAGT
TGGTCTCACCTTAGATTAGAATAAAAACAAGATGAGTTCAACAGAAGATC
TAACATCGAAATACCAAAGACTTGGGCAGGAATACCAAAAGGTAATTATT
CGTTTTAGTTCTAgattaattaattattttttttatctatattacctaaa
ttatttatcaagtttattttgatgtatattttttcatataatccatctat
ttaaaattttccaggcagtttttttCAGGTATATTACAGAGTAATCCTAA
ATTCAGAAAGAGACTTCATAATAACTTTGATTATATGGCATTtctattat
atattttttcaggCAAGAGCGCAAATCACTGTTTTGAAAAAGGGTGTGGT
TGATGAGCAAACATCAAATAAAGTTTTGCAGGTATAAACCAAACTTTTAC
ATCATGAATGATAACCTCTGGATACGCTCAAATCAACTTTAGATTAGCCC
ATTAATCTTAAGCAAAAAAGTACTTATATATTGACAATAATCTCTGCCGC
ATCtttgaataaattgaaataGTAAGATGATTTTAAATAGTAACTATTCA
TTATGGggtttaattttcatttgaactCTGGTTGgaatttgaaaacaaac
aaacaaaaaagcttGAAGTCAATATAGAAGAGCAAGTGACCTGTCTTTCT
CATACTTTATTGTGAAAAACTGAAAGGACTTTATGAATAATAGTGTACTT
TAAATAATATGAGACAAAcaaatctgaaaattaaaaactgGAAACAGATT
CTATCTGAATGTCGGAACGTTTTGctaagcctgaaaatttcaaaaaattg
agaataaacATTTACTTATTCTGTTCACTAAAACTAAGtttctcttcatt
tttcttatcacAGGATGCCTTGAAACAGAAGGATCAGACAACAAGAAAAT
ATGAACAAGATATTGATAGTTTGCAGTTTCGTAATTCACAGGTAGCTGGA
TTTCTGCTCTTCCTAAAGACAATAACTTTCTATTCAAACTTTTATATTAT
CATAATAATTGCCTTTTTGATTCTTTAAATGCTAATCGAAGGTGAGCTTA
ACACTATTGAAGCtgttattttgaagaaaataccctgacttttttatttc
atcatgtACAAATTTCAACCTCTTTTTAGCTTTCCAAACGTGTAGAAATT
CTGCAAAATGAGTTGGATGATTATGAAAGGAAAGGCACCAAACCTTCCAA
GGTATTTATTGAACATTTTATGGCTTTTTTAGTACAGGTCATTTTATAGT
TTGGTGTGAGTGCTGTGAATTCAAATGTGGCCTATGCAAGGTTTTCTCTT
CATTACCAGGACTGTTGTGTTTTTACAGTGACCTGCAGCAACAATTATTT
TTATGTTGGATGAGTGAAAAATTTATAAGCCAATTTCCCGCCTCATACAA
TGAAACTAATatggtttttaattttttttgtagctTTGTACTCACAGTAA
TTTCGCCCTATTTAACTAtcctacaaaagaaaattcattctCCATGTTAT
AGAAGTTGATCACACAAATCTTCAtatttattctcaacttcaattgagct
acaatctgacaatgtctgttgtgtgtgtgtgtctgtgtgtctgtctgtca
caaaaactttagggcagcctggagactttaaaaattgttcgatttggctg
aaattttgcacactcgttccttggtgaatatctgggggtgttttttcatt
ttttgaaaattttgatttttggagccTGGGGACaaatttttcgccaaaac
gaggctaaaaccttagggcagcctggagacttcaaaaatgcttggatttg
gcttaaattttgcacacttgttccttgggtgaatatctgggggtgctttt
tggatttttcaaaaattttgatttttttgattcatgggacgagttttttg
ccaaaacgaggctaaagctttggagcagcTTACAGGCTTccaaaatggtt
ggatttggttgaaattaggcacacttgttcatcgggtgaatatctggggg
tctattTTTCATTCTACTTGTATATTCTTTGTATGTAACTTAACTCTTTT
GCtttaaattttgttgattttttttcagtcaaatccTCAAACAAGTAGCA
TCAGCTTCATCCACCAGCAAGAGTTACAACTCAAGATTGCAGAAAACGAG
AGCCTTCATAAACAACTCCAAGAGGCTCAAACAGATAATCAAAACACTGT
CAACCATCTGGAAGCACGTTTAGAAGTCCTGGAACGAAACAAAGATAGTT
ATGAGAAACAAATTGAAGATTGTAATTCTAAAAATGCTGCCATCATTGAA
CGCATGAAAGAAGAACAGATTATGCTGAACGCCAAAGTTCATAAGTTGGA
GGAGGATCTCAAATTCGCTCATATCATGTCTGATAAATAGTAGGTTCATC
TGGGTTCATTGAAGTATTTAATTATTCAAGTTCGCACCAGCCAatgcttt
tttgaaagaaaaaaggtttttgaaataaagCAGGGTCAAAGGATCAAAGG
GTTAAAATTTCTCTAATCTAGGACTaacccacagatatctgtaaagcccg
aagggctagataggcaactttaagctttctccagcaaaaaaaagtgaagc
tgaaatttgactttttaaatttcgtgccgatggataggatctagcatttt
aattgttttcggagcgcgagatcaaaaaaagtaggcggcaaacgctattt
cacatctctcaaaccggtgaaattgcatattttagtcacgtgactctggt
aggaaatccttccaaacctaggcttcacttttcgataaaagccgcaaatc
tagcccttcgggctttacagatctgtggacTAACCATGATGCACCATGGG
GTGCTCTAGTTTTGGTCCCTTCACATTTAAGATTCAAATAAGTAGGTCCT
GGTTTTCATAAAAatagcttcttttttttcatctatCCAAAAGTAAAAAT
CTGGTAATAGGAGAAAGCCCTTGTGTATGAAATATGAAGTCAGTTGCAGC
TGTACAATTTTCATGAAAGATAAGCCCTAAAATTAATTCTCTTTCATTTA
ACGttttgaaagaagaaatctGTGGAAGttaaactttgtttttcttgata
tcttttatttataGTCAACAACAATTGAAAGAAGCTCA Coding sequence (CDS) from alignment at sc0000234_pilon:553373..560060+ >MSTRG.19882.2.p1 ID=MSTRG.19882.2.p1|Name=MSTRG.19882.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3672bp|location=Sequence derived from alignment at sc0000234_pilon:553373..560060+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAGTTCAACAGAAGATCTAACATCGAAATACCAAAGACTTGGGCAGGA
ATACCAAAAGgCAAGAGCGCAAATCACTGTTTTGAAAAAGGGTGTGGTTG
ATGAGCAAACATCAAATAAAGTTTTGCAGGATGCCTTGAAACAGAAGGAT
CAGACAACAAGAAAATATGAACAAGATATTGATAGTTTGCAGTTTCGTAA
TTCACAGCTTTCCAAACGTGTAGAAATTCTGCAAAATGAGTTGGATGATT
ATGAAAGGAAAGGCACCAAACCTTCCAAGtcaaatccTCAAACAAGTAGC
ATCAGCTTCATCCACCAGCAAGAGTTACAACTCAAGATTGCAGAAAACGA
GAGCCTTCATAAACAACTCCAAGAGGCTCAAACAGATAATCAAAACACTG
TCAACCATCTGGAAGCACGTTTAGAAGTCCTGGAACGAAACAAAGATAGT
TATGAGAAACAAATTGAAGATTGTAATTCTAAAAATGCTGCCATCATTGA
ACGCATGAAAGAAGAACAGATTATGCTGAACGCCAAAGTTCATAAGTTGG
AGGAGGATCTCAAATTCGCTCATATCATGTCTGATAAATATCAACAACAA
TTGAAAGAAGCTATGAGTTCAACAGAAGATCTAACATCGAAATACCAAAG
ACTTGGGCAGGAATACCAAAAGgCAAGAGCGCAAATCACTGTTTTGAAAA
AGGGTGTGGTTGATGAGCAAACATCAAATAAAGTTTTGCAGGATGCCTTG
AAACAGAAGGATCAGACAACAAGAAAATATGAACAAGATATTGATAGTTT
GCAGTTTCGTAATTCACAGCTTTCCAAACGTGTAGAAATTCTGCAAAATG
AGTTGGATGATTATGAAAGGAAAGGCACCAAACCTTCCAAGtcaaatccT
CAAACAAGTAGCATCAGCTTCATCCACCAGCAAGAGTTACAACTCAAGAT
TGCAGAAAACGAGAGCCTTCATAAACAACTCCAAGAGGCTCAAACAGATA
ATCAAAACACTGTCAACCATCTGGAAGCACGTTTAGAAGTCCTGGAACGA
AACAAAGATAGTTATGAGAAACAAATTGAAGATTGTAATTCTAAAAATGC
TGCCATCATTGAACGCATGAAAGAAGAACAGATTATGCTGAACGCCAAAG
TTCATAAGTTGGAGGAGGATCTCAAATTCGCTCATATCATGTCTGATAAA
TATCAACAACAATTGAAAGAAGCTATGAGTTCAACAGAAGATCTAACATC
GAAATACCAAAGACTTGGGCAGGAATACCAAAAGgCAAGAGCGCAAATCA
CTGTTTTGAAAAAGGGTGTGGTTGATGAGCAAACATCAAATAAAGTTTTG
CAGGATGCCTTGAAACAGAAGGATCAGACAACAAGAAAATATGAACAAGA
TATTGATAGTTTGCAGTTTCGTAATTCACAGCTTTCCAAACGTGTAGAAA
TTCTGCAAAATGAGTTGGATGATTATGAAAGGAAAGGCACCAAACCTTCC
AAGtcaaatccTCAAACAAGTAGCATCAGCTTCATCCACCAGCAAGAGTT
ACAACTCAAGATTGCAGAAAACGAGAGCCTTCATAAACAACTCCAAGAGG
CTCAAACAGATAATCAAAACACTGTCAACCATCTGGAAGCACGTTTAGAA
GTCCTGGAACGAAACAAAGATAGTTATGAGAAACAAATTGAAGATTGTAA
TTCTAAAAATGCTGCCATCATTGAACGCATGAAAGAAGAACAGATTATGC
TGAACGCCAAAGTTCATAAGTTGGAGGAGGATCTCAAATTCGCTCATATC
ATGTCTGATAAATATCAACAACAATTGAAAGAAGCTATGAGTTCAACAGA
AGATCTAACATCGAAATACCAAAGACTTGGGCAGGAATACCAAAAGgCAA
GAGCGCAAATCACTGTTTTGAAAAAGGGTGTGGTTGATGAGCAAACATCA
AATAAAGTTTTGCAGGATGCCTTGAAACAGAAGGATCAGACAACAAGAAA
ATATGAACAAGATATTGATAGTTTGCAGTTTCGTAATTCACAGCTTTCCA
AACGTGTAGAAATTCTGCAAAATGAGTTGGATGATTATGAAAGGAAAGGC
ACCAAACCTTCCAAGtcaaatccTCAAACAAGTAGCATCAGCTTCATCCA
CCAGCAAGAGTTACAACTCAAGATTGCAGAAAACGAGAGCCTTCATAAAC
AACTCCAAGAGGCTCAAACAGATAATCAAAACACTGTCAACCATCTGGAA
GCACGTTTAGAAGTCCTGGAACGAAACAAAGATAGTTATGAGAAACAAAT
TGAAGATTGTAATTCTAAAAATGCTGCCATCATTGAACGCATGAAAGAAG
AACAGATTATGCTGAACGCCAAAGTTCATAAGTTGGAGGAGGATCTCAAA
TTCGCTCATATCATGTCTGATAAATATCAACAACAATTGAAAGAAGCTAT
GAGTTCAACAGAAGATCTAACATCGAAATACCAAAGACTTGGGCAGGAAT
ACCAAAAGgCAAGAGCGCAAATCACTGTTTTGAAAAAGGGTGTGGTTGAT
GAGCAAACATCAAATAAAGTTTTGCAGGATGCCTTGAAACAGAAGGATCA
GACAACAAGAAAATATGAACAAGATATTGATAGTTTGCAGTTTCGTAATT
CACAGCTTTCCAAACGTGTAGAAATTCTGCAAAATGAGTTGGATGATTAT
GAAAGGAAAGGCACCAAACCTTCCAAGtcaaatccTCAAACAAGTAGCAT
CAGCTTCATCCACCAGCAAGAGTTACAACTCAAGATTGCAGAAAACGAGA
GCCTTCATAAACAACTCCAAGAGGCTCAAACAGATAATCAAAACACTGTC
AACCATCTGGAAGCACGTTTAGAAGTCCTGGAACGAAACAAAGATAGTTA
TGAGAAACAAATTGAAGATTGTAATTCTAAAAATGCTGCCATCATTGAAC
GCATGAAAGAAGAACAGATTATGCTGAACGCCAAAGTTCATAAGTTGGAG
GAGGATCTCAAATTCGCTCATATCATGTCTGATAAATATCAACAACAATT
GAAAGAAGCTATGAGTTCAACAGAAGATCTAACATCGAAATACCAAAGAC
TTGGGCAGGAATACCAAAAGgCAAGAGCGCAAATCACTGTTTTGAAAAAG
GGTGTGGTTGATGAGCAAACATCAAATAAAGTTTTGCAGGATGCCTTGAA
ACAGAAGGATCAGACAACAAGAAAATATGAACAAGATATTGATAGTTTGC
AGTTTCGTAATTCACAGCTTTCCAAACGTGTAGAAATTCTGCAAAATGAG
TTGGATGATTATGAAAGGAAAGGCACCAAACCTTCCAAGtcaaatccTCA
AACAAGTAGCATCAGCTTCATCCACCAGCAAGAGTTACAACTCAAGATTG
CAGAAAACGAGAGCCTTCATAAACAACTCCAAGAGGCTCAAACAGATAAT
CAAAACACTGTCAACCATCTGGAAGCACGTTTAGAAGTCCTGGAACGAAA
CAAAGATAGTTATGAGAAACAAATTGAAGATTGTAATTCTAAAAATGCTG
CCATCATTGAACGCATGAAAGAAGAACAGATTATGCTGAACGCCAAAGTT
CATAAGTTGGAGGAGGATCTCAAATTCGCTCATATCATGTCTGATAAATA
TCAACAACAATTGAAAGAAGCT
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000234_pilon | genome | sc0000234_pilon:553373..560060 + |
|
