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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000234_pilon:552972..560060+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.19882.1.p1 ID=MSTRG.19882.1.p1|Name=MSTRG.19882.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=7089bp|location=Sequence derived from alignment at sc0000234_pilon:552972..560060+ (Clytia hemisphaerica_ch_hm2_pilon)
tttggtTTGGAATTCTGTCCACAGACTGGTAAAGCTCATCCTGGCATAAA
ATCAAATCCCAAGCAGAGTGAACAGCAATAAGAATTAGGTATTAAgtata
cttttcttttcttttagctAGTTTTAGagatataccgtgagattgggtaa
cttgcatcagtggaggctaacatgcatagcgggcatagccctcaaatgaa
agacctggctggtcattaaaatacaactctcgcagctctactctatacca
tttttgttttgatttaactttgtattttaatgaccagtcaggtctttcat
ttgagggctatgcatgttagcctccactgatgcaagttacccaaatCTCA
CGGTATCTGTAGCTATCTATTTTTCATTGCATCATCATCAGTTGTCCTCA
TATCCATCAGGACCTTCCTCCTGTCTAGTTTGCAAAGAATGGCACATTTG
CTTGCTCAAGATCTCGAGTGCATAACTCGGAAAAAGTTGAGTGcaattcg
tttgatattcgtttgatattctcaaatttgtgTTTTACACAACatactct
attggcttccaatagtttgcAGACCCAAACTTAACCGCTTCACACACAGA
GGCCCAAGTTGTCATATTCGCATAATTAAGATTTTGCGGTGTAGCAATTT
TAGAGAGAGCACACTGTTTTTGTGACTacttttggaattggaaactattt
gAAGCCAATAGAGTATGTTACCAAGAAGAGTAATTGTGTAAAATTTGACC
ACTCAACCAGCAAAAATCGCCAGTGAGACCAATTGAGGCctctacatttt
tttttttggacctaccccggtggaggtcctataaattaacctgtgtttgt
tcgtccgtttgtccgtccgttccttcgttcgttcgtctgttaccaacttt
tctcaggattgaatgaTAGGAATCTTTGGTGGTCTAAAATGGTggtaccc
aaaatgtgacggagcctgattttcgaaaaaaaaaattttggggcaaattt
gggccAaaaaacagctaaaaaacgggttttttagactttatgaaaaattg
gatcattaattttttctgattttttgtatgaaagtagggtaccatagtta
aaagatggctcaagcagatttttgcaaaaaaattttgttggctcaaaaaa
agcatgtttatctataagaatcactattaacaagcatacatcaatgttct
tagtcaaattactgaatttttttatgagatagatgttttttttgctcacg
agggcttacatttgaagcatatgtgtgtttagacatgaaattttggttgc
ttggcgtgtttttatataaaaactggccaaattcgatatttttttataag
cacattatcaattacttaggtattagcttttctcgagattggctctttca
ttcttaatgattttttgcacaaagatgcataactttaaacccttatttgt
gacggagcctgattttcgaaaaaaaatgtttttgggcaaattttggccaa
aaacggctaaaaaaaaggttttttggactttgtgaaaaattgaatcattg
tttttttttctgattttttacatgaaagtaggtaaaagatggctcaagca
gatttttataaaaaaagaatttttcagctcgaAAAAGGCATCTTTATTAC
AAGAATCAcaattaataagcatacatcaatgttctcggtaaaaacattgt
gaattttgatatcagaaATATCGGGAGGTCGTCAGTAGTCCGACACTTTC
TAGTCCGACAGTAAAAATGTCCGACGTTGGATTTGACGAAAGTGTCAGTA
TTCCGACAACAATTTTGTCCGACAACGAGTCaaaaaaaaacatataaaaa
tcgaaatatgaatcgTGGAAGAGGAAACACATTTTTTCCTAATTTGAGGT
TAGGCCCCTAAACCCGACTTGTcttaaattttggaaagcttgttaggatt
aggctttcaagagtcaagagattggatttagctgtttttacgacccttct
ttagtgatttacaaccctgattggtcctttatttctactTATGCCAAAAT
GTCgccaaaataaacttttattaatattatctcagagaaaaacccttatt
caacattcgacactctaaaatcttgcgttttcggacaaaagtgacgtcgg
aaaaaaagacttccaaattgtaaatttattttatagattcggactatttt
actgtcggactagaaaatgtcggactagtgacatgcacccgaaATATCAA
CGATgtaacttcattttatttttattttacttgacaatatatttcgataC
TTTTTCGATactacatcaatgttcttagccaaattactcaattttttaat
gagatagatgtttttttttgctcacaaagtcttgaatatgaaagattatt
tcaagaacatgaaattttggtttctaaacattttttttataacaaacaaa
cgactaattttgatagatcgtcactatttgtgttctgaatgattatTTAA
CGGTCATgatcacgtagatatcaattatatttgttaaatgcataaccagg
taggtccataaaagtatcacttgttttttttttatttattctttatttag
agTATAGGGTACtaaaaaatctagattttacaAATGAATGTAAAGTCTAA
TTAACAACAGTCTAATTACAGCCCTCCAAAGCCCCCCATAGCCCTTCGCA
CCCCTTCAgataccctctgccttgctctGCCTCAAAGCCAGCATCTTCCA
TTAGTGCTCcaaagcctttaaaaggcttgaaaattggcgaaaattggtca
aaattagaaaaaatgacctcctttgggtaccaccTGGTACcaccgtggac
ggcccctggAGGTCCCGGCCTAGGTTTCGGGGAGTTCGattggtgcccac
tggtcagggtgTGAGGGTACACGTCTGCACCAGCGAgggtgcttcaaagt
tcctcaaagtgtcgtcAATGGCCGGCAAAAAGTGCGACCAAATTACGTGC
ATGTGGAGCCTTCAGTTGCtcgggttttctcaaatttttgtttgattaaa
cttgacaaaattcgattaagttcaattagtttgattaagtttgattaatg
TAATCAAACTAAACGAACTATCcaggtctctttaaaaaaattaatcaaac
ttaatcgaactttgtattttgagaaatttgtgaatattcgattaaagttc
aacaaccgaacttagtcgaacattaatcggccaacaaagttcgattaagt
tcgacaaagctcgattaaaaataccatttgattagttcgattaattacgt
ctggtttCAGGTGCAAGTTCAGATggtttcggatttttaaaagtaatttt
ttcaatttttcgttgctcaataacatgaaaagttctaaaataatatgtta
aaagatcctgcatcgatgccgaaacacagacAGAAAGtgataacaaaacc
cccgttgtaaatttgtttacacatGACTTGATTTTGCTCCcaattttgct
atctgcatttccaacaaaaaccagttgaaaacaaaactaaacaagGCAAT
GTGGGCCTACTTATTGCGAGgttgtcaaataccacgtgttcaataataaa
atcaatttttatttccaaaaacagGTCAGCCAGGGCGGGCAggctagggg
gggggggggtccagcCATGTTTAAATAACTTGGTTAGGTATTCAGAatta
aggattagggattcgcaattagggattagggattcgcaattaaggattag
ggattCAGACAAATTTCCATGGTTTTGAGCTGCTACTGTTTTCTACTTTA
AATATTGAGTTTGAATTCAGTTCAAtacttcaaagaaaaataaccAACCT
AGGCTCTGTTTAATTAAGTtgggaactatttaaaaaaaaaagagttaacC
TCAGAATGGGCTTTTTCTGTTAATAAGGGCCTGTAAAGCAACTAATCAAG
TTGGTCTCACCTTAGATTAGAATAAAAACAAGATGAGTTCAACAGAAGAT
CTAACATCGAAATACCAAAGACTTGGGCAGGAATACCAAAAGGTAATTAT
TCGTTTTAGTTCTAgattaattaattattttttttatctatattacctaa
attatttatcaagtttattttgatgtatattttttcatataatccatcta
tttaaaattttccaggcagtttttttCAGGTATATTACAGAGTAATCCTA
AATTCAGAAAGAGACTTCATAATAACTTTGATTATATGGCATTtctatta
tatattttttcaggCAAGAGCGCAAATCACTGTTTTGAAAAAGGGTGTGG
TTGATGAGCAAACATCAAATAAAGTTTTGCAGGTATAAACCAAACTTTTA
CATCATGAATGATAACCTCTGGATACGCTCAAATCAACTTTAGATTAGCC
CATTAATCTTAAGCAAAAAAGTACTTATATATTGACAATAATCTCTGCCG
CATCtttgaataaattgaaataGTAAGATGATTTTAAATAGTAACTATTC
ATTATGGggtttaattttcatttgaactCTGGTTGgaatttgaaaacaaa
caaacaaaaaagcttGAAGTCAATATAGAAGAGCAAGTGACCTGTCTTTC
TCATACTTTATTGTGAAAAACTGAAAGGACTTTATGAATAATAGTGTACT
TTAAATAATATGAGACAAAcaaatctgaaaattaaaaactgGAAACAGAT
TCTATCTGAATGTCGGAACGTTTTGctaagcctgaaaatttcaaaaaatt
gagaataaacATTTACTTATTCTGTTCACTAAAACTAAGtttctcttcat
ttttcttatcacAGGATGCCTTGAAACAGAAGGATCAGACAACAAGAAAA
TATGAACAAGATATTGATAGTTTGCAGTTTCGTAATTCACAGGTAGCTGG
ATTTCTGCTCTTCCTAAAGACAATAACTTTCTATTCAAACTTTTATATTA
TCATAATAATTGCCTTTTTGATTCTTTAAATGCTAATCGAAGGTGAGCTT
AACACTATTGAAGCtgttattttgaagaaaataccctgacttttttattt
catcatgtACAAATTTCAACCTCTTTTTAGCTTTCCAAACGTGTAGAAAT
TCTGCAAAATGAGTTGGATGATTATGAAAGGAAAGGCACCAAACCTTCCA
AGGTATTTATTGAACATTTTATGGCTTTTTTAGTACAGGTCATTTTATAG
TTTGGTGTGAGTGCTGTGAATTCAAATGTGGCCTATGCAAGGTTTTCTCT
TCATTACCAGGACTGTTGTGTTTTTACAGTGACCTGCAGCAACAATTATT
TTTATGTTGGATGAGTGAAAAATTTATAAGCCAATTTCCCGCCTCATACA
ATGAAACTAATatggtttttaattttttttgtagctTTGTACTCACAGTA
ATTTCGCCCTATTTAACTAtcctacaaaagaaaattcattctCCATGTTA
TAGAAGTTGATCACACAAATCTTCAtatttattctcaacttcaattgagc
tacaatctgacaatgtctgttgtgtgtgtgtgtctgtgtgtctgtctgtc
acaaaaactttagggcagcctggagactttaaaaattgttcgatttggct
gaaattttgcacactcgttccttggtgaatatctgggggtgttttttcat
tttttgaaaattttgatttttggagccTGGGGACaaatttttcgccaaaa
cgaggctaaaaccttagggcagcctggagacttcaaaaatgcttggattt
ggcttaaattttgcacacttgttccttgggtgaatatctgggggtgcttt
ttggatttttcaaaaattttgatttttttgattcatgggacgagtttttt
gccaaaacgaggctaaagctttggagcagcTTACAGGCTTccaaaatggt
tggatttggttgaaattaggcacacttgttcatcgggtgaatatctgggg
gtctattTTTCATTCTACTTGTATATTCTTTGTATGTAACTTAACTCTTT
TGCtttaaattttgttgattttttttcagtcaaatccTCAAACAAGTAGC
ATCAGCTTCATCCACCAGCAAGAGTTACAACTCAAGATTGCAGAAAACGA
GAGCCTTCATAAACAACTCCAAGAGGCTCAAACAGATAATCAAAACACTG
TCAACCATCTGGAAGCACGTTTAGAAGTCCTGGAACGAAACAAAGATAGT
TATGAGAAACAAATTGAAGATTGTAATTCTAAAAATGCTGCCATCATTGA
ACGCATGAAAGAAGAACAGATTATGCTGAACGCCAAAGTTCATAAGTTGG
AGGAGGATCTCAAATTCGCTCATATCATGTCTGATAAATAGTAGGTTCAT
CTGGGTTCATTGAAGTATTTAATTATTCAAGTTCGCACCAGCCAatgctt
ttttgaaagaaaaaaggtttttgaaataaagCAGGGTCAAAGGATCAAAG
GGTTAAAATTTCTCTAATCTAGGACTaacccacagatatctgtaaagccc
gaagggctagataggcaactttaagctttctccagcaaaaaaaagtgaag
ctgaaatttgactttttaaatttcgtgccgatggataggatctagcattt
taattgttttcggagcgcgagatcaaaaaaagtaggcggcaaacgctatt
tcacatctctcaaaccggtgaaattgcatattttagtcacgtgactctgg
taggaaatccttccaaacctaggcttcacttttcgataaaagccgcaaat
ctagcccttcgggctttacagatctgtggacTAACCATGATGCACCATGG
GGTGCTCTAGTTTTGGTCCCTTCACATTTAAGATTCAAATAAGTAGGTCC
TGGTTTTCATAAAAatagcttcttttttttcatctatCCAAAAGTAAAAA
TCTGGTAATAGGAGAAAGCCCTTGTGTATGAAATATGAAGTCAGTTGCAG
CTGTACAATTTTCATGAAAGATAAGCCCTAAAATTAATTCTCTTTCATTT
AACGttttgaaagaagaaatctGTGGAAGttaaactttgtttttcttgat
atcttttatttataGTCAACAACAATTGAAAGAAGCTCA Coding sequence (CDS) from alignment at sc0000234_pilon:552972..560060+ >MSTRG.19882.1.p1 ID=MSTRG.19882.1.p1|Name=MSTRG.19882.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3672bp|location=Sequence derived from alignment at sc0000234_pilon:552972..560060+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAGTTCAACAGAAGATCTAACATCGAAATACCAAAGACTTGGGCAGGA
ATACCAAAAGgCAAGAGCGCAAATCACTGTTTTGAAAAAGGGTGTGGTTG
ATGAGCAAACATCAAATAAAGTTTTGCAGGATGCCTTGAAACAGAAGGAT
CAGACAACAAGAAAATATGAACAAGATATTGATAGTTTGCAGTTTCGTAA
TTCACAGCTTTCCAAACGTGTAGAAATTCTGCAAAATGAGTTGGATGATT
ATGAAAGGAAAGGCACCAAACCTTCCAAGtcaaatccTCAAACAAGTAGC
ATCAGCTTCATCCACCAGCAAGAGTTACAACTCAAGATTGCAGAAAACGA
GAGCCTTCATAAACAACTCCAAGAGGCTCAAACAGATAATCAAAACACTG
TCAACCATCTGGAAGCACGTTTAGAAGTCCTGGAACGAAACAAAGATAGT
TATGAGAAACAAATTGAAGATTGTAATTCTAAAAATGCTGCCATCATTGA
ACGCATGAAAGAAGAACAGATTATGCTGAACGCCAAAGTTCATAAGTTGG
AGGAGGATCTCAAATTCGCTCATATCATGTCTGATAAATATCAACAACAA
TTGAAAGAAGCTATGAGTTCAACAGAAGATCTAACATCGAAATACCAAAG
ACTTGGGCAGGAATACCAAAAGgCAAGAGCGCAAATCACTGTTTTGAAAA
AGGGTGTGGTTGATGAGCAAACATCAAATAAAGTTTTGCAGGATGCCTTG
AAACAGAAGGATCAGACAACAAGAAAATATGAACAAGATATTGATAGTTT
GCAGTTTCGTAATTCACAGCTTTCCAAACGTGTAGAAATTCTGCAAAATG
AGTTGGATGATTATGAAAGGAAAGGCACCAAACCTTCCAAGtcaaatccT
CAAACAAGTAGCATCAGCTTCATCCACCAGCAAGAGTTACAACTCAAGAT
TGCAGAAAACGAGAGCCTTCATAAACAACTCCAAGAGGCTCAAACAGATA
ATCAAAACACTGTCAACCATCTGGAAGCACGTTTAGAAGTCCTGGAACGA
AACAAAGATAGTTATGAGAAACAAATTGAAGATTGTAATTCTAAAAATGC
TGCCATCATTGAACGCATGAAAGAAGAACAGATTATGCTGAACGCCAAAG
TTCATAAGTTGGAGGAGGATCTCAAATTCGCTCATATCATGTCTGATAAA
TATCAACAACAATTGAAAGAAGCTATGAGTTCAACAGAAGATCTAACATC
GAAATACCAAAGACTTGGGCAGGAATACCAAAAGgCAAGAGCGCAAATCA
CTGTTTTGAAAAAGGGTGTGGTTGATGAGCAAACATCAAATAAAGTTTTG
CAGGATGCCTTGAAACAGAAGGATCAGACAACAAGAAAATATGAACAAGA
TATTGATAGTTTGCAGTTTCGTAATTCACAGCTTTCCAAACGTGTAGAAA
TTCTGCAAAATGAGTTGGATGATTATGAAAGGAAAGGCACCAAACCTTCC
AAGtcaaatccTCAAACAAGTAGCATCAGCTTCATCCACCAGCAAGAGTT
ACAACTCAAGATTGCAGAAAACGAGAGCCTTCATAAACAACTCCAAGAGG
CTCAAACAGATAATCAAAACACTGTCAACCATCTGGAAGCACGTTTAGAA
GTCCTGGAACGAAACAAAGATAGTTATGAGAAACAAATTGAAGATTGTAA
TTCTAAAAATGCTGCCATCATTGAACGCATGAAAGAAGAACAGATTATGC
TGAACGCCAAAGTTCATAAGTTGGAGGAGGATCTCAAATTCGCTCATATC
ATGTCTGATAAATATCAACAACAATTGAAAGAAGCTATGAGTTCAACAGA
AGATCTAACATCGAAATACCAAAGACTTGGGCAGGAATACCAAAAGgCAA
GAGCGCAAATCACTGTTTTGAAAAAGGGTGTGGTTGATGAGCAAACATCA
AATAAAGTTTTGCAGGATGCCTTGAAACAGAAGGATCAGACAACAAGAAA
ATATGAACAAGATATTGATAGTTTGCAGTTTCGTAATTCACAGCTTTCCA
AACGTGTAGAAATTCTGCAAAATGAGTTGGATGATTATGAAAGGAAAGGC
ACCAAACCTTCCAAGtcaaatccTCAAACAAGTAGCATCAGCTTCATCCA
CCAGCAAGAGTTACAACTCAAGATTGCAGAAAACGAGAGCCTTCATAAAC
AACTCCAAGAGGCTCAAACAGATAATCAAAACACTGTCAACCATCTGGAA
GCACGTTTAGAAGTCCTGGAACGAAACAAAGATAGTTATGAGAAACAAAT
TGAAGATTGTAATTCTAAAAATGCTGCCATCATTGAACGCATGAAAGAAG
AACAGATTATGCTGAACGCCAAAGTTCATAAGTTGGAGGAGGATCTCAAA
TTCGCTCATATCATGTCTGATAAATATCAACAACAATTGAAAGAAGCTAT
GAGTTCAACAGAAGATCTAACATCGAAATACCAAAGACTTGGGCAGGAAT
ACCAAAAGgCAAGAGCGCAAATCACTGTTTTGAAAAAGGGTGTGGTTGAT
GAGCAAACATCAAATAAAGTTTTGCAGGATGCCTTGAAACAGAAGGATCA
GACAACAAGAAAATATGAACAAGATATTGATAGTTTGCAGTTTCGTAATT
CACAGCTTTCCAAACGTGTAGAAATTCTGCAAAATGAGTTGGATGATTAT
GAAAGGAAAGGCACCAAACCTTCCAAGtcaaatccTCAAACAAGTAGCAT
CAGCTTCATCCACCAGCAAGAGTTACAACTCAAGATTGCAGAAAACGAGA
GCCTTCATAAACAACTCCAAGAGGCTCAAACAGATAATCAAAACACTGTC
AACCATCTGGAAGCACGTTTAGAAGTCCTGGAACGAAACAAAGATAGTTA
TGAGAAACAAATTGAAGATTGTAATTCTAAAAATGCTGCCATCATTGAAC
GCATGAAAGAAGAACAGATTATGCTGAACGCCAAAGTTCATAAGTTGGAG
GAGGATCTCAAATTCGCTCATATCATGTCTGATAAATATCAACAACAATT
GAAAGAAGCTATGAGTTCAACAGAAGATCTAACATCGAAATACCAAAGAC
TTGGGCAGGAATACCAAAAGgCAAGAGCGCAAATCACTGTTTTGAAAAAG
GGTGTGGTTGATGAGCAAACATCAAATAAAGTTTTGCAGGATGCCTTGAA
ACAGAAGGATCAGACAACAAGAAAATATGAACAAGATATTGATAGTTTGC
AGTTTCGTAATTCACAGCTTTCCAAACGTGTAGAAATTCTGCAAAATGAG
TTGGATGATTATGAAAGGAAAGGCACCAAACCTTCCAAGtcaaatccTCA
AACAAGTAGCATCAGCTTCATCCACCAGCAAGAGTTACAACTCAAGATTG
CAGAAAACGAGAGCCTTCATAAACAACTCCAAGAGGCTCAAACAGATAAT
CAAAACACTGTCAACCATCTGGAAGCACGTTTAGAAGTCCTGGAACGAAA
CAAAGATAGTTATGAGAAACAAATTGAAGATTGTAATTCTAAAAATGCTG
CCATCATTGAACGCATGAAAGAAGAACAGATTATGCTGAACGCCAAAGTT
CATAAGTTGGAGGAGGATCTCAAATTCGCTCATATCATGTCTGATAAATA
TCAACAACAATTGAAAGAAGCT
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000234_pilon | genome | sc0000234_pilon:552972..560060 + |
|
