|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000234_pilon:410012..413420- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.19874.2.p1 ID=MSTRG.19874.2.p1|Name=MSTRG.19874.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3409bp|location=Sequence derived from alignment at sc0000234_pilon:410012..413420- (Clytia hemisphaerica_ch_hm2_pilon)
GTGGCTGGAACGAAGGCTGAAAATTGCCAACCATGGTACAGCTTTAAGAA
TTATATACTGGCCCACTTCAACTTTACGGGAGACAAAGGAGAAGGGGTTT
TGCATTTCAAAGCCAAGCAGTTCGAAATCAAAGACCGTCGAAAAAAAAGC
TTACAAATGGAAGTGACAAAAAATGTAGTAAGCACCGCATTAACCGTTTG
CAAGGTCAAATCAGCTGGTCTATCCTTCGAAACATTGTTAAGCTTAGTAT
CAACGTGTGGTGGTGACATCGGAAACATAGGTCATGGAAGGTATTAAATT
TAATTTTTTTTGCTGAAATATTTTTTAAATTCGGTTTTGAAAAAACTGTA
TTGAAAATCAGTTTTGTTCCACTCCTCCTATCCTTGGAGATATTGATTGT
CTCCAATCTTTTCTCTGGTAGATTTTGAAATTAAAGTGAGTTCAATTTTT
TAACATTTGGCAAACTTAGGCTTGGTATATGCTTTGGCAATGCTTAAGTT
TTTGAAAGATTTGAGCCTAGGTATGTTTATAGGCGATATGCTTATAAAAA
CGTATGCAGGTTGTTCAAAAGTTAGAATTAAAATCGTTTTTAGAAACCAA
TTTCCTGATATCATTGATGCGGCTTACCATTACGTCATGAAACAAACGAT
AGAATTTTTGCAAACACCGTTGTTGTGTACAGGACTCTGTCCACACATAG
CTGTTGCCTCGGACAAGTCTACCCCTGGTCGCGAGACAAATCACGCCATA
ATGATCATCATACCATTTAACGGCAAACGCATTCCGATGCCTATCGATGC
TCCTTTGGTTTACGAGATGAACGATGAAAACAATTTAGAAGGTGGAAGTG
GAGAAGATCTAGCTTACCAAATTACAGATGTTCTGAAAAAGAGGCTTAAG
ATCGACGAAGAAAAAATTCATTACATCAGAGGTTAGTAATTATTACGTTC
TTCATTTGATTTTGAGGTGAAAGTCTCTTGAAAAAGAAAGTCATGGAAGA
GGCTGGGATCTTAAATTCTTAATTTTAGCTTTCCCATTGGGTTTCTGCAT
TATCCCTCGACTGAATTTTGGTTGTTTGTTAGAAGAGTCACCAGTAAATT
TGTCAGTAAAGTAAATTCATTTCTTTTAAAGCATTCCATGCTGATGGACA
ATACCAATGCGATACGTTTCAAAGCAGGTTCAAGTCTAACTTCCAATCGC
CAGTCAAGGAAATTGATCCGTTTGTTCTATTACCGTGGGATACATCACAC
TGGATGGACCTTGCTATGGAAAAACTGTATGAGGATAGCCTTTCTTCGAG
CTTCTTGAAACAGTTAGTCACACGGGCCAATCGTTTTAATACAATGTTTC
GACATGGGAAAGGGCACGAGGAATACAAGGGGTTAGCAGATTCACTTGGT
TTGAAGTCGTTAGAGGTTGTTGGGTATTCAACTACAAGGTTTTTCTCCTC
CTCATATGAACAGTGGGATAAAATCTATCATTCTTACCCGGCACTCATCG
AAACTTATAAAAAGTTCAGAGAACAAGGTGATAATTGCGACGAAACAAGA
TACCAGGTAGGTTGACCCGATTTTATTACATACTTCAAATAATTCAGTCA
GTATATCATGGCTCGTAAAAATGGTTGTTCTTCAAGAATGATTTCACATT
CCTCTTTTGAAAATGTGATAAGTATAATGAAATAATTTGTATTAATTATG
TTCAATTTCTTACTACGGATTGTTTGTGTGATGGTCATTTGTTTTCTCTT
ATTCAGATCCGCGGGCAAGATTTTGCTATCGACATCTGTGGCGCAGCTGA
TGTTCTAAGACCAATCGTCTTGATGATGGTACGCTGCCAAGCAGTTGATT
TACCTCTGTGGAAAGTACCGACCTGGTTTCACAGAATGATCCGTCAGCTT
GAGTCAACAGCAGAAGAAGTGAAGAAGAGGGAAGGATTCTGCTCTTCACT
CAACTTGACCTACCTTGGTGAAAATTGGAAATCTTTGACCGCGAACGAAA
AGAACAAGAGGAGTGAAAAGTTGGGGACATTCAAGAATGTAGATGTAATT
AAAGGCTGGTTAGTTACAGACAAAGGAACTGTCGAATCTGAAGCAGGTGA
TGATTCTCTCTATATAATAATAGCCTTACGTGTCTGAAGCCTTTTTAGCA
GCGTTTTTGTTTTCGCTAGCGATTTAAACTCGCACGGGACTTTTATTAGG
GGGTATTGTTTCATTTAAAAGTAACAGTTTTCTTCCTGTTTTATTCGAAA
TACAAACAGTGGAATCCCCCGGTTGAAAATCATTAGCACGTCACTGAAGT
AATTGCAAAAAAGAAAAAAATTGGATTACTGAAAAGAAATGAAAATGTCT
TTGGCGAAGATTAAGATACTTATTTTGGTATATTTTTAAAAAATTATTGT
CTTCAATGAAGCTAATGAAATAGTGAAAAGTCGTCTGTGATGACGTCTGG
GACACCTAGTATTTATTATATTATATATTCTACTTCTAATATCGATGGAT
ATTTTGTGTTGTAACAAAAAATGGTAAGAAATTGTTTAGTTCTAGAGTAC
ATAGATAAAAGTATTGAATGGTTTATATTTGAACTTGTATAAATTTCGTT
ATAGCTGATACGAAGAAAACCAAGAAGAAACAATATACTTGGAAGTATCG
GAGCTCAGAAGAGTGTCTGTCGGATCTTGTCACTCTGGCAAAAGAAGCGA
AAACCCTAATATCAACGAGGTTCGATTCGTCAGTTGACCAAGAGGTTAAA
GATCTAGCCGTTATTTTTGATCTCGAAAATACGGTTCTCCTACTTAAAGA
TTTTAAACGTGTGGGGAATAAGTTGAAAGCAAAGCGCAAAGATATCACAA
AATTTGAAACTAATGGTGCAAAGGAGTTCGAAAGTTTTTACAAACACGTT
TGTCAACTACCTCAAGTAGAAAGCATGTACGAAAAGGACTCTAATCTTGA
TTTGCTCCCACATCATGCCTCAAGTGTTTTGAAAAAATACCGATCCAGTA
TAAAATCCATGGTATTTGAGACCCACACAAAAGATCTATTCACTACACCG
AAAGGAGAGAAGTTGAAGAATGTTTCCCAGTCACAGTTGGTCGAAATTAA
GCCGTCAAAGGAACGAGATTTGACCCAGCTTTTTACTTTAACCTTTGAAA
ACGGAATATCTGAGGAAGCCATCGTTGCCGAAAGCAAGTTTGCTGAGTTG
CTATATACAAACGAGGCTGTTTATACTTCTTTTGGAAAGGAAGTCCGCAT
TGCCTTGGACGTTGCCCTCAGATCAGGTGGCTGTGAAGCTATAGTCGAGG
GTTTCTATAGCTTGGTCAAAAGAAACATAAAAAGAACGGTCGTCAAAGAA
ATAAAACTCTAACTCAAAGAGCTATAGTGGATTGGTGTTTGCCCCTACCG
ATATCTTGT Coding sequence (CDS) from alignment at sc0000234_pilon:410012..413420- >MSTRG.19874.2.p1 ID=MSTRG.19874.2.p1|Name=MSTRG.19874.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2064bp|location=Sequence derived from alignment at sc0000234_pilon:410012..413420- (Clytia hemisphaerica_ch_hm2_pilon)
CTGATACGAAGAAAACCAAGAAGAAACAATATACTTGGAAGTATCGGAGC
TCAGAAGAGTGTCTGTCGGATCTTGTCACTCTGGCAAAAGAAGCGAAAAC
CCTAATATCAACGAGGTTCGATTCGTCAGTTGACCAAGAGGTTAAAGATC
TAGCCGTTATTTTTGATCTCGAAAATACGGTTCTCCTACTTAAAGATTTT
AAACGTGTGGGGAATAAGTTGAAAGCAAAGCGCAAAGATATCACAAAATT
TGAAACTAATGGTGCAAAGGAGTTCGAAAGTTTTTACAAACACGTTTGTC
AACTACCTCAAGTAGAAAGCATGTACGAAAAGGACTCTAATCTTGATTTG
CTCCCACATCATGCCTCAAGTGTTTTGAAAAAATACCGATCCAGTATAAA
ATCCATGGTATTTGAGACCCACACAAAAGATCTATTCACTACACCGAAAG
GAGAGAAGTTGAAGAATGTTTCCCAGTCACAGTTGGTCGAAATTAAGCCG
TCAAAGGAACGAGATTTGACCCAGCTTTTTACTTTAACCTTTGAAAACGG
AATATCTGAGGAAGCCATCGTTGCCGAAAGCAAGTTTGCTGAGTTGCTAT
ATACAAACGAGGCTGTTTATACTTCTTTTGGAAAGGAAGTCCGCATTGCC
TTGGACGTTGCCCTCAGATCAGGTGGCTGTGAAGCTATAGTCGAGGGTTT
CTATAGCTTGGTCAAAAGAAACATAAAAAGAACGGTCGTCAAAGAAATAA
AACTCTAAATGATGGTACGCTGCCAAGCAGTTGATTTACCTCTGTGGAAA
GTACCGACCTGGTTTCACAGAATGATCCGTCAGCTTGAGTCAACAGCAGA
AGAAGTGAAGAAGAGGGAAGGATTCTGCTCTTCACTCAACTTGACCTACC
TTGGTGAAAATTGGAAATCTTTGACCGCGAACGAAAAGAACAAGAGGAGT
GAAAAGTTGGGGACATTCAAGAATGTAGATGTAATTAAAGGCTGGTTAGT
TACAGACAAAGGAACTGTCGAATCTGAAGCAGCTGATACGAAGAAAACCA
AGAAGAAACAATATACTTGGAAGTATCGGAGCTCAGAAGAGTGTCTGTCG
GATCTTGTCACTCTGGCAAAAGAAGCGAAAACCCTAATATCAACGAGGTT
CGATTCGTCAGTTGACCAAGAGGTTAAAGATCTAGCCGTTATTTTTGATC
TCGAAAATACGGTTCTCCTACTTAAAGATTTTAAACGTGTGGGGAATAAG
TTGAAAGCAAAGCGCAAAGATATCACAAAATTTGAAACTAATGGTGCAAA
GGAGTTCGAAAGTTTTTACAAACACGTTTGTCAACTACCTCAAGTAGAAA
GCATGTACGAAAAGGACTCTAATCTTGATTTGCTCCCACATCATGCCTCA
AGTGTTTTGAAAAAATACCGATCCAGTATAAAATCCATGGTATTTGAGAC
CCACACAAAAGATCTATTCACTACACCGAAAGGAGAGAAGTTGAAGAATG
TTTCCCAGTCACAGTTGGTCGAAATTAAGCCGTCAAAGGAACGAGATTTG
ACCCAGCTTTTTACTTTAACCTTTGAAAACGGAATATCTGAGGAAGCCAT
CGTTGCCGAAAGCAAGTTTGCTGAGTTGCTATATACAAACGAGGCTGTTT
ATACTTCTTTTGGAAAGGAAGTCCGCATTGCCTTGGACGTTGCCCTCAGA
TCAGGTGGCTGTGAAGCTATAGTCGAGGGTTTCTATAGCTTGGTCAAAAG
AAACATAAAAAGAACGGTCGTCAAAGAAATAAAACTCTAAATGATGGTAC
GCTGCCAAGCAGTTGATTTACCTCTGTGGAAAGTACCGACCTGGTTTCAC
AGAATGATCCGTCAGCTTGAGTCAACAGCAGAAGAAGTGAAGAAGAGGGA
AGGATTCTGCTCTTCACTCAACTTGACCTACCTTGGTGAAAATTGGAAAT
CTTTGACCGCGAACGAAAAGAACAAGAGGAGTGAAAAGTTGGGGACATTC
AAGAATGTAGATGTAATTAAAGGCTGGTTAGTTACAGACAAAGGAACTGT
CGAATCTGAAGCAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000234_pilon | genome | sc0000234_pilon:410012..413420 - |
|
