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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000234_pilon:275598..284503- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.19872.1.p2 ID=MSTRG.19872.1.p2|Name=MSTRG.19872.1.p2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=8906bp|location=Sequence derived from alignment at sc0000234_pilon:275598..284503- (Clytia hemisphaerica_ch_hm2_pilon)
TTGCTACAATCAAGTTCAAAATATATGGGACTTTTTTGAAATCCACACTA
TTCTTTAGAAAAACCCTTCTCCCCAGTCTACAAAGCTGGTCCTGTGCAGA
AGCAAAACAACCACCACAGCTTTGTAAACAGGGGGGAGGATTTTCACTTG
TTTTGAGATCAACTAGATAGAAAAAGTCTCATTATATTATGCACAAGATT
GTCTGAATTTTTAAAAAAAAATTTGAAAGAGCTTTCCCCACCACATGCGA
AATTTTTTTTTAAAAATGGCTATCATGGCTTCTTCCCGCCAGAAAAAAGC
CGTGTGCTTGCATAGCAACGAAATTAGAGTCCCTAGCAACAAGATGGCAG
ACTAAAAATGGCGGGAAAAAAATGTAAACAAAGGGTAATCTGATCCTTTC
TCAGGGGGGAGTGGCAATTTTACAACCCTTTCACACCATTTAAAAAGTAA
GCAAAGAGTAATCTGATCTTTTCTGAAGAGGTAGTGCCAATTTTACAAAC
CTTTTACAAAACCTTTTTCAATAAATTTCTCTGTATTTGTCACTAAAAAT
TACAAATGGATGACACAAGTGATTTATCGCAATGCGTGGTCAACTTAAAC
GCCTCTACCCCTGTACCAAACCGAGACCTTGAATCGTATGATGCTGCCCT
TGGACGAGACAGTGATTCCCAGGTTTCCACAACATCAGCGCAAGGTCTAG
ACACTAGCGCCACTGCAAGAAGTTCCCGTTCCAAGAAACCAAACAAAACA
AAAGGCAAAGGTGAAAATAGCAATAAGAACAAAAAGAAAAACCCACATGA
AGCATACTTGATTACGTACTCTCAGGCTGATGTTGTGAAAGTCCCGGGAC
GCGAGCACTTTGCAAATATGGTGGTCCAAGAATTTGACAGAAATGATTCT
GTTTCAGAGAAGTGGGTTGTATCAGCAGAATTGCACCGAAATCATGGCAT
TCACTACCACCTCGCTTTGAAATTAAAGAAACCACGACGGTTTAAGGAAG
TTCGCAATGCAATCAAAAATAAATATGACATTGATCTTGACTTTAAAGAA
TGGCATAGTAATTATCATGATGCCTTTTCATATGTTGTTAAGTTTGATTC
CCACTATGTAACAAGTCCTGGACACGTTATTTTGTCAACCCCACCCAGAA
CAACAAAGGCAACAGAGGCTAAGCGTGCCCGCGCTCAACATAGTAGTGAA
GCACCTCCAAAGCGCAAGAAGAGTAATTTGCCACCCAAGTTAGGCCGGGA
AGATGTGGGAAATATCATCCGAGAAAATGGTATCAAGTCGGTTAAAGAAC
TGTTCTCTCTAGCCCATGCCCAAGCAAAGGAGGGTAAAACTGATTTGAGA
GGGTATCTTTACACTCATCCTGACCAAAGTTTTATGACCAAGCAAATTTC
AACCGTAGTAGGTATAGAACTGGTTGAGGATGAGGCAATCCGTGAAAATA
TGTCAAGGCTTGAAATTTTACGTCAAGCAAAAGATGGTGAGTGCGCTAAA
CATCCTGTCACTAGGGAACTATGCAACGGTCTTTGGCTTTCTAGTGCATT
GGAGGTGCTACGTTTGAACGATATATCACGCGGTAGGTTTACAGAGCTTG
TATTGAACGCCCTGTGGTATGGCAGAAGCAAAGGCTATAATCTGATGATA
TGTGGGAAAAGTAATTGTGCTAAGTCCTTTATGTTAATGCCGTTGATTGA
AATTTTTGATTGTTTTATGACACCGTCCCCCGGAAATTATAACTGGGTGG
GTGCTCCTGAGAAAGAAATTGTTTTCTTGAACGATTTAAGGTATGAAAAG
GATGGGGAACAAAAGGTAATGGCATGGAATCTTTTTCTAAATCTTCTCGA
AGGTTTCCCTGTCAATATTGCCAGGCCTAAAAATCGATTTTCAACGGACC
TCCTTTGGACAAAAAGACAACCCATTTTTGCAACTGCTGAGAAGAAAATT
GTTCGAATTGTTAACGGAGAATTTGATGAGGGAGAAACCAACCAAATGGA
CATGCGGTGGAATATTTTAAACTTCAAGCATGTATTTGACCGGGATGCTG
CTAATTATAACATTACTCCTTGTGGGGCTTGTTTTGCTAAACTCTTGCTT
GACGCATAATTCTCTATTGCTTGACCCATAATTAATTTTGCATATTATCG
TGTTTTTATAATTTTCCAAAACTATATTGCGTTTTTTTATAATTTCCCTA
AACAGTCGTGTCTTTTATAATTTTCACAAAACTATGGCCTTTTCTTATAG
TTTCCTGAAAGGGTCGTGTCTTTTATAATTTTCCTAAAGTTCCGCGTTTT
CTTATAATTTCCCTAAACAGTCGTGTCTTTTATAATTTTCCAAAACTTCA
GCGTTTTCTTATAATTTCTTCGAAATGGTCGTGATTTTTCTAATTTCAAA
GATCGGTTGGCTTTTTTACCTCAGTGCCAAAGATGGAATTCTAAATGCAA
CGGTAAACGGGTGTTTACCATTGGGTGTTTACCATTAATAATAAATAATA
ATCTCAATCTTCTTATTTTAACGGTGCACGGGGCGTTTACCGTTGCTTTT
AGAATTCCCTCCTAAAGAATTTGAGCCAAAAAATTGTTAAAAATAGATCA
ATCAGGCAATATTTATAAAAATGTAAATATACACAACCATTTCACCAGTA
ACCATGTCAACTTTTCAAAATCAATACTTTGTACGCTGGCCATGATTGGC
AATTACTGCCTCAATGCGTTTGTCCATCGACAAAATAATTTTGTCTATTT
TATCTTTCGGGTAATTCAATAGGATATTTTTAACCCGCATCGCAAACTCC
TCTTTTGTTTCATGAGTTACTTGTTTGTCAATAGCTTCTTTGCGAATCTC
TTTCCCCACTAAATGGAAGAAGTTTTCGATCGGGTTGAGATCTGGAGAGC
GGGCGGGTATACAAAACAAGTGAGCACCAAGTTTTTCCAAAGCACGTTTG
GCACGCCTTGAATTTTGAACTGGGCATCCATCCTGTAGAACACGTTTAGA
TTTGGGGTTTATTGATAGCATAAAAGCGACAGGGAATTTCTTTCTAATCA
TTGTAGAAAACTTCCTACCGCAAAGGCGGTTTTCGTATTGTTCACAGAGC
ACAACGCCTTGTTGAAAAGATATCGCCACCATGAACTTGATTTGGGTAGA
GCCTTCCTTTTGGCCTTTGGCCGTACATCCAAAAGTGAGTCCTTCGTCTC
TTCTTCTCCATTCCCGTGATGTGGGAGCACGTGCCTGGTCCAAAGGGTTC
TGCTTATAAATAAAGCCTACTGCATCGAGATAAAAGCTAATGCCTTGTTT
CCAAAATTCAAGGCCAAGCCCTAACCTTTTGATTCGCTTTGCATAGTCGA
GGCGTGATTTCAGATCTTTCTGCTTCAATATACCTTTACGCCGGGTGCTT
CGGTATCCATAGCCAATTTTTCCTAAATGTCTCCTGAATGTCGAGTTTGA
AGCTTTTTGCTGAATTTCTGGTAGCGATAGCTGAAGTCTCTTTGAGCTGA
AGCTTCCCTCAAATGTACGTAGAATTTTGATCTGTCGTTTAACAGCGCGG
TAGTCCCTTTCATTAAGTAGAGGTGTTCGGCCAGGGTTTTGTTTTCGTTT
GTCAAAAGGTTCGTTTCCATCCAGCGGTATCTGACTGTGACGATACATAG
TTGATCTGGGAATTCCTTTGAAGCCGGGAAACCTGTTGCCTTCATTGCGT
AGAATCTGCGGTACCTTGACTTTTCCATATTGAACAAGGGCTCGTAGTTG
GCAAGACTGTGCATAAGTCATCTTCTTTCTCTTTCCTTTCATTGTTTTTG
CCATTTTATTTTTGTTTATACTATTTCGGAGAACTCGACAGTCTATTGAA
TAACAAATTATGCTCTATTGTCTCTAGGAAACCAATGTCGCACTATAAAG
TTATTCAAAAGACCGCCAAGTTCTCCCAAACGACCATTTTTAATATTTAT
ATGCTGAAAATATAAGAAAAATGAATACGATAAAATAACTGTCACAAATT
CCTTTTCTTTCTCGAGAGAACATATTCCCGCTAAACTTACTATGCTTGAT
TCTACCAGAACGCAGATCCCCCGCAGGCTTTTACCGGGAATAAAAATACT
AAAATTATTTATTTCGAACACACTATAAACAAAAATATAACGTTCAAATT
TGTGTCGCTAAATTTAACTAAGTATAAACATTATGTACACTGAACACCAA
GAAAAATGACATAATTTGCATAAATTACCAAATCACATTAATTATGCATG
ACGTCATAAACAAAAAAGTTTGTAAAATGTAAGCTCCCTTCAGTAAAATC
AAAGCAGGAGTGAAAAGTATCAGTAAAAGTCAAGGATTGCGGGAGATGAT
TACCCGCAAATTTGCTAAGTCCTTCAAAAAATAAAGACAATCAAGTTCAA
AATATATGGGACTTTTTTGAAATCCACACTATTCTTTAGAAAAACCCTTC
TCCCCAGTCTACAAAGCTGGTCCTGTGCAGAAGCAAAACAACCACCACAG
CTTTGTAAACAGGGGGGAGGATTTTCACTTGTTTTGAGCTCAACTAGATA
GAAAAAGTCTCATTATATTATGCACAAGATTGTCTGAATTTTTAAAAAAA
AATTTGAAAGAGCTTTCCCCACCACATGCGAAATTTTTTTTTAAAAATGG
CTATCATGGCTTCTTCCCGCCAGAAAAAAGCCGTGTGCTTGCATAGCAAC
GAAATTAGAGTCCCTAGCAACAAGATGGCAGACTAAAAATGGCGGGAAAA
AAATGTAAACAAAGGGTAATCTGATCCTTTCTCAGGGGGGAGTGGCAATT
TTACAACCCTTTCACACCATTTAAAAAGTAAGCAAAGAGTAATCTGATCT
TTTCTGAAGAGGTAGTGCCAATTTTACAAACCTTTTACAAATAAAAAAAT
TTCAATAAATTTCTCTGTATTTGTCACTAAAAATTACAAATGGATGACAC
AAGTGATTTATCGCAATGCGTGGTCAACTTAAACGCCTCTACCCCTGTAC
CAAACCGAGACCTTGAATCGTATGATGCTGCCTTTGGACGAGACAGTGAT
TCCCAGGTTTCCACAACATCAGCGCAAGGTCTAGACACTAGCGCCACTGC
AAGAAGTTCCCGTTCCAAGAAACCAAACAAAACAAAAGGCAAAGGTGAAA
ATAGCAATAAGAACAAAAAGAAAAACCCACGTGAAGCATACTTGATTACG
TACTCTCAGGCTGATGTTGTGAAAGTCCCGGGACGCGAGCACTTTGCCAA
TATGGTGGTCCAAGAATTTGACAGAAATGATTCTGTTTCAGAGAAGTGGG
TTGTATCAGCAGAATTGCACCGAAATCATGGCATTCACTACCACCTCGCT
TTGAAATTAAAGAAACCACGACGGTTTAAGGAAGTTCGCAATGCAATCAA
AACTAAATATAACATTGATCTTGACTTTAAAGAATGGCATAGTAATTATC
ATGATGCCTTTTCATATGTTGTTAAGTTTGATTCCCACTATGTAACAAGT
CCTAGACACGTTATTTTGTCAAACCCACCCAGAACAACAAAGGCAACAGA
GGCTAAGCGTGCCCAAGCTCAACATAGTAGTGAAGCACCTCCAAAGCGCA
AGAAGAGTAATTTGCCACCCAAGTTAGGCCGGGAAGATGTGGGAAATATC
ATCCGAGAAAATGGTATCAAGTCGGTTAAAGAACTGTTCTCTCTAGCCCA
TGCCCAAGCAAAGGAGGGTAAAACTGATTTGAGAGGGTATCTTTACACTC
ATCCTGACCAAAGTTTTATGACCAAGCAAATTTCAACCGTAGTAGGTATA
GAACTGGTTGAGGATGAGGCAATCCGTGAAAATATGTCAAGGCTTGAAAT
TTTACGTCAAGCAAAAGATGGTGAGTGCGCTAAACATCCTGTCACTAGGG
AACTATGCAACGGTCTTTGGCTTTCTAGTGCATTGGAGGTGCTACGTTTG
AACGATATATCACGCGGTAGGTTTACAGAGCTTGTATTGAACGCCCTGTG
GTATGGCAGAAGCAAAGGCTATAATCTGATGATATGTGGGAAAAGTAATT
GTGCTAAGTCCTTTATGTTAATGCCGTTGATTGAAATTTTTGATTGTTTT
ATGACACCGTCCCCCGGAAATTATAACTGGGTGGGTGCTCCTGAGAAAGA
AATTGTTTTCTTGAACGATTTAAGGTATGAAAAGGATGGGGAACAAAAGG
TAATGGCATGGAATCTTTTTCTAAATCTTCTCGAAGGTTTCCCTGTCAAT
ATTGCCAGGCCTAAAAATCGATTTTCAACGGACCTCCTTTGGACAAAAAG
ACAACCCATTTTTGCAACTGCTGAGAAGAAAATTGTTCGAATTGTTAACG
GAGAATTTGATGAGGGAGAAACCAACCAAATGGACATGCGGTGGAATATT
TTAAACTTCAAGCATGTATTTGACCGGGATGCTGCTAATTATAACATTAC
TCCTTGTGGGGCTTGTTTTGCTAAACTCTTGCTTGACGCATAATTCTCTA
TTGCTTGACCCATAATTAATTTTGCATATTATCGTGTTTTTATAATTTTC
CAAAACTATATTGCGTTTTTTTATAATTTCCCTAAACAGTCGTGTCTTTT
ATAATTTTCACAAAACTATGGCCTTTTCTTATAGTTTCCTGAAAGGGTCG
TGTCTTTTATAATTTTCCTAAAGTTCCGCGTTTTCTTATAATTTCCCTAA
ACAGTCGTGTCTTTTATAATTTTCCAAAACTTCAGCGTTTTCTTATAATT
TCTTCGAAATGGTCGTGATTTTTCTAATTTCAAAGATCGGTTGGCTTTTT
TACCTCAGTGCCAAAGATGGAATTCTAAATGCAACGGTAAACGGGTGTTT
ACCATTAATAATAAATAATAATCTCAATCTTCTTATTTTAACGGTGCACG
GGGCGTTTACCGTTGCTTTTAGAATTCCCTCCTAAAGAATTTGAGCCAAA
AAATTGTTAAAAATAGATCAATCAGGCAATATTTATAAAAATGTAAATAT
ACACAACCATTTCACCAGTAACCATGTCAACTTTTCAAAATCAATACTTT
GTACGCTGGCCATGATTGGCAATTACTGCCTCAATGCGTTTGTCCATCGA
CAAAATAATTTTGTCTATTTTATCTTTCGGGTAATTCAATAGGATATTTT
TAACCCGCATCGCAAACTCCTCTTTTGTTTCATGAGTTACTTGTTTGTCA
ATAGCTTCTTTGCGAATCTCTTTCCCCACTAAATGGAAGAAGTTTTCGAT
CGGGTTGAGATCTGGAGAGCGGGCGGGTATACAAAACAAGTGAGCACCAA
GTTTTTCCAAAGCACGTTTGGCACGCCTTGAATTTTGAACTGGGCATCCA
TCCTGTAGAACACGTTTGGATTTGGGGTTTATTGATAGCATAAAAGCGAC
AGGGAATTTCTTTCTAATCATTGTAGAAAACTTCCTACCGCAAAGGCGGT
TTTCGTATTGTTCACAGAGCACAACGCCTTGTTGAAAAGATATCGCCACC
ATGAACTTGATTTGGGTAGAGCCTTCCTTTTGGCCTTTGGCCGTACATCC
AAAAGTGAGTCCTTCGTCTCTTCTTCTCCATTCCCGTGATGTGGGAGCAC
GTGCCTGGTCCAAAGGGTTCTGCTTATAAATAAAGCCTACTGCATCGAGA
TAAAAGCTAATGCCTTGTTTCCAAAATTCAAGGCCAAGCCCTAACCTTTT
GATTCGCTTTGCATAGTCGAGGCGTGATTTCAGATCTTTCTGCTTCAATA
TACCTTTACGCCGGGTGCTTCGGTATCCATAGCCAATTTTTCCTAAATGT
CTCCTGAATGTCGAGTTTGAAGCTTTTTGCTGAATTTCTGGTAGCGATAG
CTGAAGTCTCTTTGAGCTGAAGCTTCCCTCAAATGTACGTAGAATTTTGA
TCTGTCGTTTAACAGCGCGGTAGTCCCTTTCATTAAGTAGAGGTGTTCGG
CCAGGGTTTTGTTTTCGTTTGTCAAAAGGTTCGTTTCCATCCAGCGGTAT
CTGACTGTGACGATACATAGTTGATCTGGGAATTCCTTTGAAGCCGGGAA
ACCTGTTGCCTTCATTGCGTAGAATCTGCGGTACCTTGACTTTTCCATAT
TGAACAAGGGCTCGTAGTTGGCAAGACTGTGCATAAGTCATCTTCTTTCT
CTTTCCTTTCATTGTTTTTGCCATTTTATTTTTGTTTATACTATTTCGGA
GAACTCGACAGTCTATTGAATAACAAATTATGCTCTATTGTCTCTAGGAA
ACCAATGTCGCACTATAAAGTTATTCAAAAGACCGCCAAGTTCTCCCAAA
CGACCATTTTTAATATTTATATGCTGAAAATATAAGAAAAATGAATACGA
TAAAATAACTGTCACAAATTCCTTTTCTTTCTCGAGAGAACATATTCCCG
CTAAACTTACTATGCTTGATTCTACCAGAACGCAGATCCCCCGCAGGCTT
TTACCGGGAATAAAAATACTAAAATTATTTATTTCGAACACACTATAAAC
AAAAATATAACGTTCAAATTTGTGTCGCTAAATTTAACTAAGTATAAACA
TTATGTACACTGAACACCAAGAAAAATGACATAATTTGCATAAATTACCA
AATCACATTAATTATGCATGACGTCATAAACAAAAAAGTTTGTAAAATGT
AAGCTCCCTTCAGTAAAATCAAAGCAGGAGTGAAAAGTATCAGTAAAAGT
CAAGGATTGCGGGAGATGATTACCCGCAAATTTGCTAAGTCCTTCAAAAA
ATAAAGACAATCAAGTTCAAAATATATGGGACTTTTTTGAAATCCACACT
ATTCTTTAGAAAAACCCTTCTCCCCAGTCTACAAAGCTGGTCCTGTGCAG
AAGCAAAACAACCACCACAGCTTTGTAAACAGGGGGGAGGATTTTCACTT
GTTTTG Coding sequence (CDS) from alignment at sc0000234_pilon:275598..284503- >MSTRG.19872.1.p2 ID=MSTRG.19872.1.p2|Name=MSTRG.19872.1.p2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1554bp|location=Sequence derived from alignment at sc0000234_pilon:275598..284503- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGATGACACAAGTGATTTATCGCAATGCGTGGTCAACTTAAACGCCTC
TACCCCTGTACCAAACCGAGACCTTGAATCGTATGATGCTGCCTTTGGAC
GAGACAGTGATTCCCAGGTTTCCACAACATCAGCGCAAGGTCTAGACACT
AGCGCCACTGCAAGAAGTTCCCGTTCCAAGAAACCAAACAAAACAAAAGG
CAAAGGTGAAAATAGCAATAAGAACAAAAAGAAAAACCCACGTGAAGCAT
ACTTGATTACGTACTCTCAGGCTGATGTTGTGAAAGTCCCGGGACGCGAG
CACTTTGCCAATATGGTGGTCCAAGAATTTGACAGAAATGATTCTGTTTC
AGAGAAGTGGGTTGTATCAGCAGAATTGCACCGAAATCATGGCATTCACT
ACCACCTCGCTTTGAAATTAAAGAAACCACGACGGTTTAAGGAAGTTCGC
AATGCAATCAAAACTAAATATAACATTGATCTTGACTTTAAAGAATGGCA
TAGTAATTATCATGATGCCTTTTCATATGTTGTTAAGTTTGATTCCCACT
ATGTAACAAGTCCTAGACACGTTATTTTGTCAAACCCACCCAGAACAACA
AAGGCAACAGAGGCTAAGCGTGCCCAAGCTCAACATAGTAGTGAAGCACC
TCCAAAGCGCAAGAAGAGTAATTTGCCACCCAAGTTAGGCCGGGAAGATG
TGGGAAATATCATCCGAGAAAATGGTATCAAGTCGGTTAAAGAACTGTTC
TCTCTAGCCCATGCCCAAGCAAAGGAGGGTAAAACTGATTTGAGAGGGTA
TCTTTACACTCATCCTGACCAAAGTTTTATGACCAAGCAAATTTCAACCG
TAGTAGGTATAGAACTGGTTGAGGATGAGGCAATCCGTGAAAATATGTCA
AGGCTTGAAATTTTACGTCAAGCAAAAGATGGTGAGTGCGCTAAACATCC
TGTCACTAGGGAACTATGCAACGGTCTTTGGCTTTCTAGTGCATTGGAGG
TGCTACGTTTGAACGATATATCACGCGGTAGGTTTACAGAGCTTGTATTG
AACGCCCTGTGGTATGGCAGAAGCAAAGGCTATAATCTGATGATATGTGG
GAAAAGTAATTGTGCTAAGTCCTTTATGTTAATGCCGTTGATTGAAATTT
TTGATTGTTTTATGACACCGTCCCCCGGAAATTATAACTGGGTGGGTGCT
CCTGAGAAAGAAATTGTTTTCTTGAACGATTTAAGGTATGAAAAGGATGG
GGAACAAAAGGTAATGGCATGGAATCTTTTTCTAAATCTTCTCGAAGGTT
TCCCTGTCAATATTGCCAGGCCTAAAAATCGATTTTCAACGGACCTCCTT
TGGACAAAAAGACAACCCATTTTTGCAACTGCTGAGAAGAAAATTGTTCG
AATTGTTAACGGAGAATTTGATGAGGGAGAAACCAACCAAATGGACATGC
GGTGGAATATTTTAAACTTCAAGCATGTATTTGACCGGGATGCTGCTAAT
TATAACATTACTCCTTGTGGGGCTTGTTTTGCTAAACTCTTGCTTGACGC
ATAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000234_pilon | genome | sc0000234_pilon:275598..284503 - |
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