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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000234_pilon:275599..284503+ Legend: exonthree_prime_UTRpolypeptideCDSfive_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.19871.2.p3 ID=MSTRG.19871.2.p3|Name=MSTRG.19871.2.p3|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=8905bp|location=Sequence derived from alignment at sc0000234_pilon:275599..284503+ (Clytia hemisphaerica_ch_hm2_pilon)
AAAACAAGTGAAAATCCTCCCCCCTGTTTACAAAGCTGTGGTGGTTGTTT
TGCTTCTGCACAGGACCAGCTTTGTAGACTGGGGAGAAGGGTTTTTCTAA
AGAATAGTGtggatttcaaaaaagtcccatatattttgaacttgattgtc
tttattttttgaaggaCTTAGCAAATTTGCGGGTAATCATCTCCCGCAAT
CCTTGACTTTTACTGATACTTTTCACTCCTGCTTTGATTTTACTGAAGGG
AGCTtacattttacaaacttttttgtttatgacgtcatgcATAATTAATG
TGATTTGGTaatttatgcaaattatgtCATTTTTCTTGGTGTTCAGTGTA
CATAATGTTTATACTTAGTTAAATTTAGCGACACAAATTTGAAcgttata
tttttgtttatagtGTGTTCGaaataaataattttagtatttttattcCC
GGTAAAAGCCTGCGGGGGATCTGCGTTCTGGTAGAATCAAGCATAGTAAG
TTTAGCGGGAATATGTTCTCTCGAGAAAGAAAAGGAATTTGTGACAGTTA
TTTTATcgtattcatttttcttatattttcagcatataaatattaaaaat
ggtCGTTTGGGAGAACTTggcggtcttttgaataactttatAGTGCGACA
TTGGTTTCCTAGAGACAATAGAGcataatttgttattcaatagactgtCG
AGTTCTCCgaaatagtataaacaaaaataaaatggcaaaaacaatgaaag
gaaagagaaagaagaTGACTTATGCACAGTCTTGCCAACTACGAGCCCTT
GTTCAATATGGAAAAGTCAAGGTACCGCAGATTCTACGCAATGAAGGCAA
CAGGTTTCCCGGCTTCAAAGGAATTCCCAGATCAACTATGTATCGTCACA
GTCAGATACCGCTGGATGGAAACGAACCTTTTGACAAACGAAAACAAAAC
CCTGGCCGAACACCTCTACTTAATGAAAGGGACTACCGCGCTGTTAAACG
ACAGATCAAAATTCTACGTACATTTGAGGGAAGCTTCAGCTCAAAGAGAC
TTCAGCTATCGCTACCAGAAATTCAGCAAAAAGCTTCAAACTCGACATTC
AGGAGACATTTAGGAAAAATTGGCTATGGATACCGAAGCACCCGGCGTAA
AGGTATATTGAAGCAGAAAGATCTGAAATCACGCCTCGACTATGCAAAGC
GAATCAAAAGGTTAGGGCTTGGCCTTGAATTTTGGAAACAAGGCATTAGC
TTTTATCTCGATGCAGTAGGCTTTATTTATAAGCAGAACCCTTTGGACCA
GGCACGTGCTCCCACATCACGGGAATGGAGAAGAAGAGACGAAGGACTCA
CTTTTGGATGTACGGCCAAAGGCCAAAAGGAAGGCTCTACCCAAATCAAG
TTCATGGTGGcgatatcttttcaacaaggcGTTGTGCTCTGTGAACAATA
CGAAAACCGCCTTTGCGGTAGGAAGTTTTCTACAATGATTAGAAAGAAAT
TCCCTGTCGCTTTTATGCTATCAATAAACCCCAAATCCAAACGTGTTCTA
CAGGATGGATGCCCAGTTCAAAATTCAAGGCGTGCCAAACGTGCTTTGGA
AAAACTTGGTGCTCACTTGTTTTGTATACCCGCCCGCTCTCCAGATCTCA
ACCCGATCGAAAACTTCTTCCATTTAGTGGGGAAAGAGATTCGCAAAGAA
GCTATTGACAAACAAGTAACTCATGAAACAAAAGAGGAGTTTGCGATGCG
GGTTAAAAATATCCTATTGAATTACCCGAAAGATAAAATAGACAAAATTA
TTTTGTCGATGGACAAACGCATTGAGGCAGTAATTGCCAATCATGGCCAG
CGTACAAAgtattgattttgaaaagttgacaTGGTTACTGGTGAAATGGT
TGtgtatatttacatttttataaatattGCCTGATTGAtctatttttaac
aattttttggctcaaattctTTAGGAGGGAATTCTAAAAGCAACGGTAAA
CGCCCCGTGCACCGTTAAAATAAGAAGATTGagattattatttattatta
atgGTAAACACCCGTTTACCGTTGCATTTAGAATTCCATCTTTGGCACTG
AGGTAAAAAAGCCAACCGATCtttgaaattagaaaaatcaCGACCATTTC
GaagaaattataagaaaacgctgaagttttggaaaattATAAAAGACACG
ACTGTTTAGGGAAATTATAAGAAAACGCGGAACTTTAGGAAAATTATAAA
AGACACGACCCTTTCAGGAAACTATAAGAAAAGGCCATAGTTTTGTGAAA
ATTATAAAAGACACGACTGTTTAgggaaattataaaaaaacgcaatatag
ttttggaaaattataaaaacacgATAATATGCAAAATTAATTATGGGTCA
AGCAATAGAGAATTATGCGTCAAGCAAGAGTTTAGCAAAACAAGCCCCAC
AAGGAGTAATGTTATAATTAGCAGCATCCCGGTCAAATACATGCTTGAAG
TTTAAAATATTCCACCGCATGTCCATTTGGTTGGTTTCTCCCTCATCAAA
TTCTCCGTTAACAATTCGAACAATTTTCTTCTCAGCAGTTGCAAAAATGG
GTTGTCTTTTTGTCCAAAGGAGGTCCGTTGAAAATCGATTTTTAGGCCTG
GCAATATTGACAGGGAAACCTTCGAGAagatttagaaaaagattcCATGC
CATTACCTTTTGTTCCCCAtccttttcataccttaaatcGTTCAAGAAAA
CAATTTCTTTCTCAGGAGCACCCACCCAGTTATAATTTCCGGGGGACGGT
GtcataaaacaatcaaaaatttcaatcaacGGCATTAACATAAAGGACTT
AGCACAATTACTTTTCCCACATATCATCAGATTATAGCCTTTGCTTCTGC
CATACCACAGGGCGTTCAATACAAGCTCTGTAAACCTACCGCGTGATATA
TCGTTCAAACGTAGCACCTCCAATGCACTAGAAAGCCAAAGACCGTTGCA
TAGTTCCCTAGTGACAGGATGTTTAGCGCACTCACCATCTTTTGCTTGAC
GTAAAATTTCAAGCCTTGACATATTTTCACGGATTGCCTCATCCTCAACC
AGTTCTATACCTACTACGGTTGAAATTTGCTTGGTCATAAAACTTTGGTC
AGGATGAGTGTAAAGATACCCTCTCAAATCAGTTTTACCCTCCTTTGCTT
GGGCATGGGCTAGAGAGAACAGTTCTTTAACCGACTTGATACCATTTTCT
CGGATGATATTTCCCACATCTTCCCGGCCTAACTTGGGTGGCAAATTACT
CTTCTTGCGCTTTGGAGGTGCTTCACTACTATGTTGAGCTTGGGCACGCT
TAGCCTCTGTTGCCTTTGTTGTTCTGGGTGGGTTTGACAAAATAACGTGT
CTAGGACTTGTTACATAGTGGGAATCAAACTTAACAACATATGAAAAGGC
ATCATGATAATTACTATGCCATTCTTTAAAGTCAAGATCAATGTTATATT
TAGTTTTGATTGCATTGCGAACTTCCTTAAACCGTCGTGGTTTCTTTAAT
TTCAAAGCGAGGTGGTAGTGAATGCCATGATTTCGGTGCAATTCTGCTGA
TACAACCCACTTCTCTGAAACAGAATCATTTCTGTCAAATTCTTGGACCA
CCATATTGGCAAAGTGCTCGCGTCCCGGGACTTTCACAACATCAGCCTGA
GAGTACGTAATCAAGTATGCTTCACGtgggtttttctttttgttcttatt
gctattttcacctttgccttttgttttgtttggtttcttgGAACGGGAAC
TTCTTGCAGTGGCGCTAGTGTCTAGACCTTGCGCTGATGTTGTGGAAACC
TGGGAATCACTGTCTCGTCCAAAGGCAGCATCATACGATTCAAGGTCTCG
GTTTGGTACAGGGGTAGAGGCGTTTAAGTTGACCACGCATTGCGATAAAT
CACTTGTGTCATCCATTTGTAATTTTTAGTGACAAATACAgagaaattta
ttgaaatttttttatttgtaaaaggTTTGTAAAATTGGCACTACCTCTTC
AGAAAAGATCAGATTACTCTTTGCTTACTTTTTAAATGGTGTGAAAGGGT
TGTAAAATTGCCACTCCCCCCTGAGAAAGGATCAGATTAccctttgttta
catttttttcccgCCATTTTTAGTCTGCCATCTTGTTGCTAGGGACTCTA
ATTTCGTTGCTATGCAAGCACACGGCTTTTTTCTGGCGGGAAGAAGCCAT
GAtagccatttttaaaaaaaaatttcgcatgTGGTGGGGAAagctctttc
aaatttttttttaaaaattcagacaatctTGTGCATAATATAATGAGACT
TTTTCTATCTAGTTGAGCTCAAAACAAGTGAAAATCCTCCCCCCTGTTTA
CAAAGCTGTGGTGGTTGTTTTGCTTCTGCACAGGACCAGCTTTGTAGACT
GGGGAGAAGGGTTTTTCTAAAGAATAGTGtggatttcaaaaaagtcccat
atattttgaacttgattgtctttattttttgaaggaCTTAGCAAATTTGC
GGGTAATCATCTCCCGCAATCCTTGACTTTTACTGATACTTTTCACTCCT
GCTTTGATTTTACTGAAGGGAGCTtacattttacaaacttttttgtttat
gacgtcatgcATAATTAATGTGATTTGGTaatttatgcaaattatgtCAT
TTTTCTTGGTGTTCAGTGTACATAATGTTTATACTTAGTTAAATTTAGCG
ACACAAATTTGAAcgttatatttttgtttatagtGTGTTCGaaataaata
attttagtatttttattcCCGGTAAAAGCCTGCGGGGGATCTGCGTTCTG
GTAGAATCAAGCATAGTAAGTTTAGCGGGAATATGTTCTCTCGAGAAAGA
AAAGGAATTTGTGACAGTTATTTTATcgtattcatttttcttatattttc
agcatataaatattaaaaatggtCGTTTGGGAGAACTTggcggtcttttg
aataactttatAGTGCGACATTGGTTTCCTAGAGACAATAGAGcataatt
tgttattcaatagactgtCGAGTTCTCCgaaatagtataaacaaaaataa
aatggcaaaaacaatgaaaggaaagagaaagaagaTGACTTATGCACAGT
CTTGCCAACTACGAGCCCTTGTTCAATATGGAAAAGTCAAGGTACCGCAG
ATTCTACGCAATGAAGGCAACAGGTTTCCCGGCTTCAAAGGAATTCCCAG
ATCAACTATGTATCGTCACAGTCAGATACCGCTGGATGGAAACGAACCTT
TTGACAAACGAAAACAAAACCCTGGCCGAACACCTCTACTTAATGAAAGG
GACTACCGCGCTGTTAAACGACAGATCAAAATTCTACGTACATTTGAGGG
AAGCTTCAGCTCAAAGAGACTTCAGCTATCGCTACCAGAAATTCAGCAAA
AAGCTTCAAACTCGACATTCAGGAGACATTTAGGAAAAATTGGCTATGGA
TACCGAAGCACCCGGCGTAAAGGTATATTGAAGCAGAAAGATCTGAAATC
ACGCCTCGACTATGCAAAGCGAATCAAAAGGTTAGGGCTTGGCCTTGAAT
TTTGGAAACAAGGCATTAGCTTTTATCTCGATGCAGTAGGCTTTATTTAT
AAGCAGAACCCTTTGGACCAGGCACGTGCTCCCACATCACGGGAATGGAG
AAGAAGAGACGAAGGACTCACTTTTGGATGTACGGCCAAAGGCCAAAAGG
AAGGCTCTACCCAAATCAAGTTCATGGTGGcgatatcttttcaacaaggc
GTTGTGCTCTGTGAACAATACGAAAACCGCCTTTGCGGTAGGAAGTTTTC
TACAATGATTAGAAAGAAATTCCCTGTCGCTTTTATGCTATCAATAAACC
CCAAATCTAAACGTGTTCTACAGGATGGATGCCCAGTTCAAAATTCAAGG
CGTGCCAAACGTGCTTTGGAAAAACTTGGTGCTCACTTGTTTTGTATACC
CGCCCGCTCTCCAGATCTCAACCCGATCGAAAACTTCTTCCATTTAGTGG
GGAAAGAGATTCGCAAAGAAGCTATTGACAAACAAGTAACTCATGAAACA
AAAGAGGAGTTTGCGATGCGGGTTAAAAATATCCTATTGAATTACCCGAA
AGATAAAATAGACAAAATTATTTTGTCGATGGACAAACGCATTGAGGCAG
TAATTGCCAATCATGGCCAGCGTACAAAgtattgattttgaaaagttgac
aTGGTTACTGGTGAAATGGTTGtgtatatttacatttttataaatattGC
CTGATTGAtctatttttaacaattttttggctcaaattctTTAGGAGGGA
ATTCTAAAAGCAACGGTAAACGCCCCGTGCACCGTTAAAATAAGAAGATT
GagattattatttattattaatgGTAAACACCCAATGGTAAACACCCGTT
TACCGTTGCATTTAGAATTCCATCTTTGGCACTGAGGTAAAAAAGCCAAC
CGATCtttgaaattagaaaaatcaCGACCATTTCGaagaaattataagaa
aacgctgaagttttggaaaattATAAAAGACACGACTGTTTAGGGAAATT
ATAAGAAAACGCGGAACTTTAGGAAAATTATAAAAGACACGACCCTTTCA
GGAAACTATAAGAAAAGGCCATAGTTTTGTGAAAATTATAAAAGACACGA
CTGTTTAgggaaattataaaaaaacgcaatatagttttggaaaattataa
aaacacgATAATATGCAAAATTAATTATGGGTCAAGCAATAGAGAATTAT
GCGTCAAGCAAGAGTTTAGCAAAACAAGCCCCACAAGGAGTAATGTTATA
ATTAGCAGCATCCCGGTCAAATACATGCTTGAAGTTTAAAATATTCCACC
GCATGTCCATTTGGTTGGTTTCTCCCTCATCAAATTCTCCGTTAACAATT
CGAACAATTTTCTTCTCAGCAGTTGCAAAAATGGGTTGTCTTTTTGTCCA
AAGGAGGTCCGTTGAAAATCGATTTTTAGGCCTGGCAATATTGACAGGGA
AACCTTCGAGAagatttagaaaaagattcCATGCCATTACCTTTTGTTCC
CCAtccttttcataccttaaatcGTTCAAGAAAACAATTTCTTTCTCAGG
AGCACCCACCCAGTTATAATTTCCGGGGGACGGTGtcataaaacaatcaa
aaatttcaatcaacGGCATTAACATAAAGGACTTAGCACAATTACTTTTC
CCACATATCATCAGATTATAGCCTTTGCTTCTGCCATACCACAGGGCGTT
CAATACAAGCTCTGTAAACCTACCGCGTGATATATCGTTCAAACGTAGCA
CCTCCAATGCACTAGAAAGCCAAAGACCGTTGCATAGTTCCCTAGTGACA
GGATGTTTAGCGCACTCACCATCTTTTGCTTGACGTAAAATTTCAAGCCT
TGACATATTTTCACGGATTGCCTCATCCTCAACCAGTTCTATACCTACTA
CGGTTGAAATTTGCTTGGTCATAAAACTTTGGTCAGGATGAGTGTAAAGA
TACCCTCTCAAATCAGTTTTACCCTCCTTTGCTTGGGCATGGGCTAGAGA
GAACAGTTCTTTAACCGACTTGATACCATTTTCTCGGATGATATTTCCCA
CATCTTCCCGGCCTAACTTGGGTGGCAAATTACTCTTCTTGCGCTTTGGA
GGTGCTTCACTACTATGTTGAGCGCGGGCACGCTTAGCCTCTGTTGCCTT
TGTTGTTCTGGGTGGGGTTGACAAAATAACGTGTCCAGGACTTGTTACAT
AGTGGGAATCAAACTTAACAACATATGAAAAGGCATCATGATAATTACTA
TGCCATTCTTTAAAGTCAAGATCAAtgtcatatttatttttgattgcaTT
GCGAACTTCCTTAAACCGTCGTGGTTTCTTTAATTTCAAAGCGAGGTGGT
AGTGAATGCCATGATTTCGGTGCAATTCTGCTGATACAACCCACTTCTCT
GAAACAGAATCATTTCTGTCAAATTCTTGGACCACCATATTTGCAAAGTG
CTCGCGTCCCGGGACTTTCACAACATCAGCCTGAGAGTACGTAATCAAGT
ATGCTTCATGtgggtttttctttttgttcttattgctattttcacctttg
ccttttgttttgtttggtttcttgGAACGGGAACTTCTTGCAGTGGCGCT
AGTGTCTAGACCTTGCGCTGATGTTGTGGAAACCTGGGAATCACTGTCTC
GTCCAAGGGCAGCATCATACGATTCAAGGTCTCGGTTTGGTACAGGGGTA
GAGGCGTTTAAGTTGACCACGCATTGCGATAAATCACTTGTGTCATCCAT
TTGTAATTTTTAGTGACAAATACAgagaaatttattgaaaaaggtTTTGT
AAAAGGTTTGTAAAATTGGCACTACCTCTTCAGAAAAGATCAGATTACTC
TTTGCTTACTTTTTAAATGGTGTGAAAGGGTTGTAAAATTGCCACTCCCC
CCTGAGAAAGGATCAGATTAccctttgtttacatttttttcccgCCATTT
TTAGTCTGCCATCTTGTTGCTAGGGACTCTAATTTCGTTGCTATGCAAGC
ACACGGCTTTTTTCTGGCGGGAAGAAGCCATGAtagccatttttaaaaaa
aaatttcgcatgTGGTGGGGAAagctctttcaaatttttttttaaaaatt
cagacaatctTGTGCATAATATAATGAGACTTTTTCTATCTAGTTGATCT
CAAAACAAGTGAAAATCCTCCCCCCTGTTTACAAAGCTGTGGTGGTTGTT
TTGCTTCTGCACAGGACCAGCTTTGTAGACTGGGGAGAAGGGTTTTTCTA
AAGAATAGTGtggatttcaaaaaagtcccatatattttgaacttgattGT
AGCAA Coding sequence (CDS) from alignment at sc0000234_pilon:275599..284503+ >MSTRG.19871.2.p3 ID=MSTRG.19871.2.p3|Name=MSTRG.19871.2.p3|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=726bp|location=Sequence derived from alignment at sc0000234_pilon:275599..284503+ (Clytia hemisphaerica_ch_hm2_pilon)
TTATGCGTCAAGCAAGAGTTTAGCAAAACAAGCCCCACAAGGAGTAATGT
TATAATTAGCAGCATCCCGGTCAAATACATGCTTGAAGTTTAAAATATTC
CACCGCATGTCCATTTGGTTGGTTTCTCCCTCATCAAATTCTCCGTTAAC
AATTCGAACAATTTTCTTCTCAGCAGTTGCAAAAATGGGTTGTCTTTTTG
TCCAAAGGAGGTCCGTTGAAAATCGATTTTTAGGCCTGGCAATATTGACA
GGGAAACCTTCGAGAagatttagaaaaagattcCATGCCATTACCTTTTG
TTCCCCAtccttttcataccttaaatcGTTCAAGAAAACAATTTCTTTCT
CAGGAGCACCCACCCAGTTATAATTTCCGGGGGACGGTGtcataaaacaa
tcaaaaatttcaatcaacGGCATTAACATAAAGGACTTAGCACAATTACT
TTTCCCACATATCATCAGATTATAGCCTTTGCTTCTGCCATACCACAGGG
CGTTCAATACAAGCTCTGTAAACCTACCGCGTGATATATCGTTCAAACGT
AGCACCTCCAATGCACTAGAAAGCCAAAGACCGTTGCATAGTTCCCTAGT
GACAGGATGTTTAGCGCACTCACCATCTTTTGCTTGACGTAAAATTTCAA
GCCTTGACATATTTTCACGGATTGCCTCATCCTCAACCAGTTCTATACCT
ACTACGGTTGAAATTTGCTTGGTCAT
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000234_pilon | genome | sc0000234_pilon:275599..284503 + |
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