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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000234_pilon:275598..284503+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.19871.1.p3 ID=MSTRG.19871.1.p3|Name=MSTRG.19871.1.p3|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=8906bp|location=Sequence derived from alignment at sc0000234_pilon:275598..284503+ (Clytia hemisphaerica_ch_hm2_pilon)
CAAAACAAGTGAAAATCCTCCCCCCTGTTTACAAAGCTGTGGTGGTTGTT
TTGCTTCTGCACAGGACCAGCTTTGTAGACTGGGGAGAAGGGTTTTTCTA
AAGAATAGTGtggatttcaaaaaagtcccatatattttgaacttgattgt
ctttattttttgaaggaCTTAGCAAATTTGCGGGTAATCATCTCCCGCAA
TCCTTGACTTTTACTGATACTTTTCACTCCTGCTTTGATTTTACTGAAGG
GAGCTtacattttacaaacttttttgtttatgacgtcatgcATAATTAAT
GTGATTTGGTaatttatgcaaattatgtCATTTTTCTTGGTGTTCAGTGT
ACATAATGTTTATACTTAGTTAAATTTAGCGACACAAATTTGAAcgttat
atttttgtttatagtGTGTTCGaaataaataattttagtatttttattcC
CGGTAAAAGCCTGCGGGGGATCTGCGTTCTGGTAGAATCAAGCATAGTAA
GTTTAGCGGGAATATGTTCTCTCGAGAAAGAAAAGGAATTTGTGACAGTT
ATTTTATcgtattcatttttcttatattttcagcatataaatattaaaaa
tggtCGTTTGGGAGAACTTggcggtcttttgaataactttatAGTGCGAC
ATTGGTTTCCTAGAGACAATAGAGcataatttgttattcaatagactgtC
GAGTTCTCCgaaatagtataaacaaaaataaaatggcaaaaacaatgaaa
ggaaagagaaagaagaTGACTTATGCACAGTCTTGCCAACTACGAGCCCT
TGTTCAATATGGAAAAGTCAAGGTACCGCAGATTCTACGCAATGAAGGCA
ACAGGTTTCCCGGCTTCAAAGGAATTCCCAGATCAACTATGTATCGTCAC
AGTCAGATACCGCTGGATGGAAACGAACCTTTTGACAAACGAAAACAAAA
CCCTGGCCGAACACCTCTACTTAATGAAAGGGACTACCGCGCTGTTAAAC
GACAGATCAAAATTCTACGTACATTTGAGGGAAGCTTCAGCTCAAAGAGA
CTTCAGCTATCGCTACCAGAAATTCAGCAAAAAGCTTCAAACTCGACATT
CAGGAGACATTTAGGAAAAATTGGCTATGGATACCGAAGCACCCGGCGTA
AAGGTATATTGAAGCAGAAAGATCTGAAATCACGCCTCGACTATGCAAAG
CGAATCAAAAGGTTAGGGCTTGGCCTTGAATTTTGGAAACAAGGCATTAG
CTTTTATCTCGATGCAGTAGGCTTTATTTATAAGCAGAACCCTTTGGACC
AGGCACGTGCTCCCACATCACGGGAATGGAGAAGAAGAGACGAAGGACTC
ACTTTTGGATGTACGGCCAAAGGCCAAAAGGAAGGCTCTACCCAAATCAA
GTTCATGGTGGcgatatcttttcaacaaggcGTTGTGCTCTGTGAACAAT
ACGAAAACCGCCTTTGCGGTAGGAAGTTTTCTACAATGATTAGAAAGAAA
TTCCCTGTCGCTTTTATGCTATCAATAAACCCCAAATCCAAACGTGTTCT
ACAGGATGGATGCCCAGTTCAAAATTCAAGGCGTGCCAAACGTGCTTTGG
AAAAACTTGGTGCTCACTTGTTTTGTATACCCGCCCGCTCTCCAGATCTC
AACCCGATCGAAAACTTCTTCCATTTAGTGGGGAAAGAGATTCGCAAAGA
AGCTATTGACAAACAAGTAACTCATGAAACAAAAGAGGAGTTTGCGATGC
GGGTTAAAAATATCCTATTGAATTACCCGAAAGATAAAATAGACAAAATT
ATTTTGTCGATGGACAAACGCATTGAGGCAGTAATTGCCAATCATGGCCA
GCGTACAAAgtattgattttgaaaagttgacaTGGTTACTGGTGAAATGG
TTGtgtatatttacatttttataaatattGCCTGATTGAtctatttttaa
caattttttggctcaaattctTTAGGAGGGAATTCTAAAAGCAACGGTAA
ACGCCCCGTGCACCGTTAAAATAAGAAGATTGagattattatttattatt
aatgGTAAACACCCGTTTACCGTTGCATTTAGAATTCCATCTTTGGCACT
GAGGTAAAAAAGCCAACCGATCtttgaaattagaaaaatcaCGACCATTT
CGaagaaattataagaaaacgctgaagttttggaaaattATAAAAGACAC
GACTGTTTAGGGAAATTATAAGAAAACGCGGAACTTTAGGAAAATTATAA
AAGACACGACCCTTTCAGGAAACTATAAGAAAAGGCCATAGTTTTGTGAA
AATTATAAAAGACACGACTGTTTAgggaaattataaaaaaacgcaatata
gttttggaaaattataaaaacacgATAATATGCAAAATTAATTATGGGTC
AAGCAATAGAGAATTATGCGTCAAGCAAGAGTTTAGCAAAACAAGCCCCA
CAAGGAGTAATGTTATAATTAGCAGCATCCCGGTCAAATACATGCTTGAA
GTTTAAAATATTCCACCGCATGTCCATTTGGTTGGTTTCTCCCTCATCAA
ATTCTCCGTTAACAATTCGAACAATTTTCTTCTCAGCAGTTGCAAAAATG
GGTTGTCTTTTTGTCCAAAGGAGGTCCGTTGAAAATCGATTTTTAGGCCT
GGCAATATTGACAGGGAAACCTTCGAGAagatttagaaaaagattcCATG
CCATTACCTTTTGTTCCCCAtccttttcataccttaaatcGTTCAAGAAA
ACAATTTCTTTCTCAGGAGCACCCACCCAGTTATAATTTCCGGGGGACGG
TGtcataaaacaatcaaaaatttcaatcaacGGCATTAACATAAAGGACT
TAGCACAATTACTTTTCCCACATATCATCAGATTATAGCCTTTGCTTCTG
CCATACCACAGGGCGTTCAATACAAGCTCTGTAAACCTACCGCGTGATAT
ATCGTTCAAACGTAGCACCTCCAATGCACTAGAAAGCCAAAGACCGTTGC
ATAGTTCCCTAGTGACAGGATGTTTAGCGCACTCACCATCTTTTGCTTGA
CGTAAAATTTCAAGCCTTGACATATTTTCACGGATTGCCTCATCCTCAAC
CAGTTCTATACCTACTACGGTTGAAATTTGCTTGGTCATAAAACTTTGGT
CAGGATGAGTGTAAAGATACCCTCTCAAATCAGTTTTACCCTCCTTTGCT
TGGGCATGGGCTAGAGAGAACAGTTCTTTAACCGACTTGATACCATTTTC
TCGGATGATATTTCCCACATCTTCCCGGCCTAACTTGGGTGGCAAATTAC
TCTTCTTGCGCTTTGGAGGTGCTTCACTACTATGTTGAGCTTGGGCACGC
TTAGCCTCTGTTGCCTTTGTTGTTCTGGGTGGGTTTGACAAAATAACGTG
TCTAGGACTTGTTACATAGTGGGAATCAAACTTAACAACATATGAAAAGG
CATCATGATAATTACTATGCCATTCTTTAAAGTCAAGATCAATGTTATAT
TTAGTTTTGATTGCATTGCGAACTTCCTTAAACCGTCGTGGTTTCTTTAA
TTTCAAAGCGAGGTGGTAGTGAATGCCATGATTTCGGTGCAATTCTGCTG
ATACAACCCACTTCTCTGAAACAGAATCATTTCTGTCAAATTCTTGGACC
ACCATATTGGCAAAGTGCTCGCGTCCCGGGACTTTCACAACATCAGCCTG
AGAGTACGTAATCAAGTATGCTTCACGtgggtttttctttttgttcttat
tgctattttcacctttgccttttgttttgtttggtttcttgGAACGGGAA
CTTCTTGCAGTGGCGCTAGTGTCTAGACCTTGCGCTGATGTTGTGGAAAC
CTGGGAATCACTGTCTCGTCCAAAGGCAGCATCATACGATTCAAGGTCTC
GGTTTGGTACAGGGGTAGAGGCGTTTAAGTTGACCACGCATTGCGATAAA
TCACTTGTGTCATCCATTTGTAATTTTTAGTGACAAATACAgagaaattt
attgaaatttttttatttgtaaaaggTTTGTAAAATTGGCACTACCTCTT
CAGAAAAGATCAGATTACTCTTTGCTTACTTTTTAAATGGTGTGAAAGGG
TTGTAAAATTGCCACTCCCCCCTGAGAAAGGATCAGATTAccctttgttt
acatttttttcccgCCATTTTTAGTCTGCCATCTTGTTGCTAGGGACTCT
AATTTCGTTGCTATGCAAGCACACGGCTTTTTTCTGGCGGGAAGAAGCCA
TGAtagccatttttaaaaaaaaatttcgcatgTGGTGGGGAAagctcttt
caaatttttttttaaaaattcagacaatctTGTGCATAATATAATGAGAC
TTTTTCTATCTAGTTGAGCTCAAAACAAGTGAAAATCCTCCCCCCTGTTT
ACAAAGCTGTGGTGGTTGTTTTGCTTCTGCACAGGACCAGCTTTGTAGAC
TGGGGAGAAGGGTTTTTCTAAAGAATAGTGtggatttcaaaaaagtccca
tatattttgaacttgattgtctttattttttgaaggaCTTAGCAAATTTG
CGGGTAATCATCTCCCGCAATCCTTGACTTTTACTGATACTTTTCACTCC
TGCTTTGATTTTACTGAAGGGAGCTtacattttacaaacttttttgttta
tgacgtcatgcATAATTAATGTGATTTGGTaatttatgcaaattatgtCA
TTTTTCTTGGTGTTCAGTGTACATAATGTTTATACTTAGTTAAATTTAGC
GACACAAATTTGAAcgttatatttttgtttatagtGTGTTCGaaataaat
aattttagtatttttattcCCGGTAAAAGCCTGCGGGGGATCTGCGTTCT
GGTAGAATCAAGCATAGTAAGTTTAGCGGGAATATGTTCTCTCGAGAAAG
AAAAGGAATTTGTGACAGTTATTTTATcgtattcatttttcttatatttt
cagcatataaatattaaaaatggtCGTTTGGGAGAACTTggcggtctttt
gaataactttatAGTGCGACATTGGTTTCCTAGAGACAATAGAGcataat
ttgttattcaatagactgtCGAGTTCTCCgaaatagtataaacaaaaata
aaatggcaaaaacaatgaaaggaaagagaaagaagaTGACTTATGCACAG
TCTTGCCAACTACGAGCCCTTGTTCAATATGGAAAAGTCAAGGTACCGCA
GATTCTACGCAATGAAGGCAACAGGTTTCCCGGCTTCAAAGGAATTCCCA
GATCAACTATGTATCGTCACAGTCAGATACCGCTGGATGGAAACGAACCT
TTTGACAAACGAAAACAAAACCCTGGCCGAACACCTCTACTTAATGAAAG
GGACTACCGCGCTGTTAAACGACAGATCAAAATTCTACGTACATTTGAGG
GAAGCTTCAGCTCAAAGAGACTTCAGCTATCGCTACCAGAAATTCAGCAA
AAAGCTTCAAACTCGACATTCAGGAGACATTTAGGAAAAATTGGCTATGG
ATACCGAAGCACCCGGCGTAAAGGTATATTGAAGCAGAAAGATCTGAAAT
CACGCCTCGACTATGCAAAGCGAATCAAAAGGTTAGGGCTTGGCCTTGAA
TTTTGGAAACAAGGCATTAGCTTTTATCTCGATGCAGTAGGCTTTATTTA
TAAGCAGAACCCTTTGGACCAGGCACGTGCTCCCACATCACGGGAATGGA
GAAGAAGAGACGAAGGACTCACTTTTGGATGTACGGCCAAAGGCCAAAAG
GAAGGCTCTACCCAAATCAAGTTCATGGTGGcgatatcttttcaacaagg
cGTTGTGCTCTGTGAACAATACGAAAACCGCCTTTGCGGTAGGAAGTTTT
CTACAATGATTAGAAAGAAATTCCCTGTCGCTTTTATGCTATCAATAAAC
CCCAAATCTAAACGTGTTCTACAGGATGGATGCCCAGTTCAAAATTCAAG
GCGTGCCAAACGTGCTTTGGAAAAACTTGGTGCTCACTTGTTTTGTATAC
CCGCCCGCTCTCCAGATCTCAACCCGATCGAAAACTTCTTCCATTTAGTG
GGGAAAGAGATTCGCAAAGAAGCTATTGACAAACAAGTAACTCATGAAAC
AAAAGAGGAGTTTGCGATGCGGGTTAAAAATATCCTATTGAATTACCCGA
AAGATAAAATAGACAAAATTATTTTGTCGATGGACAAACGCATTGAGGCA
GTAATTGCCAATCATGGCCAGCGTACAAAgtattgattttgaaaagttga
caTGGTTACTGGTGAAATGGTTGtgtatatttacatttttataaatattG
CCTGATTGAtctatttttaacaattttttggctcaaattctTTAGGAGGG
AATTCTAAAAGCAACGGTAAACGCCCCGTGCACCGTTAAAATAAGAAGAT
TGagattattatttattattaatgGTAAACACCCAATGGTAAACACCCGT
TTACCGTTGCATTTAGAATTCCATCTTTGGCACTGAGGTAAAAAAGCCAA
CCGATCtttgaaattagaaaaatcaCGACCATTTCGaagaaattataaga
aaacgctgaagttttggaaaattATAAAAGACACGACTGTTTAGGGAAAT
TATAAGAAAACGCGGAACTTTAGGAAAATTATAAAAGACACGACCCTTTC
AGGAAACTATAAGAAAAGGCCATAGTTTTGTGAAAATTATAAAAGACACG
ACTGTTTAgggaaattataaaaaaacgcaatatagttttggaaaattata
aaaacacgATAATATGCAAAATTAATTATGGGTCAAGCAATAGAGAATTA
TGCGTCAAGCAAGAGTTTAGCAAAACAAGCCCCACAAGGAGTAATGTTAT
AATTAGCAGCATCCCGGTCAAATACATGCTTGAAGTTTAAAATATTCCAC
CGCATGTCCATTTGGTTGGTTTCTCCCTCATCAAATTCTCCGTTAACAAT
TCGAACAATTTTCTTCTCAGCAGTTGCAAAAATGGGTTGTCTTTTTGTCC
AAAGGAGGTCCGTTGAAAATCGATTTTTAGGCCTGGCAATATTGACAGGG
AAACCTTCGAGAagatttagaaaaagattcCATGCCATTACCTTTTGTTC
CCCAtccttttcataccttaaatcGTTCAAGAAAACAATTTCTTTCTCAG
GAGCACCCACCCAGTTATAATTTCCGGGGGACGGTGtcataaaacaatca
aaaatttcaatcaacGGCATTAACATAAAGGACTTAGCACAATTACTTTT
CCCACATATCATCAGATTATAGCCTTTGCTTCTGCCATACCACAGGGCGT
TCAATACAAGCTCTGTAAACCTACCGCGTGATATATCGTTCAAACGTAGC
ACCTCCAATGCACTAGAAAGCCAAAGACCGTTGCATAGTTCCCTAGTGAC
AGGATGTTTAGCGCACTCACCATCTTTTGCTTGACGTAAAATTTCAAGCC
TTGACATATTTTCACGGATTGCCTCATCCTCAACCAGTTCTATACCTACT
ACGGTTGAAATTTGCTTGGTCATAAAACTTTGGTCAGGATGAGTGTAAAG
ATACCCTCTCAAATCAGTTTTACCCTCCTTTGCTTGGGCATGGGCTAGAG
AGAACAGTTCTTTAACCGACTTGATACCATTTTCTCGGATGATATTTCCC
ACATCTTCCCGGCCTAACTTGGGTGGCAAATTACTCTTCTTGCGCTTTGG
AGGTGCTTCACTACTATGTTGAGCGCGGGCACGCTTAGCCTCTGTTGCCT
TTGTTGTTCTGGGTGGGGTTGACAAAATAACGTGTCCAGGACTTGTTACA
TAGTGGGAATCAAACTTAACAACATATGAAAAGGCATCATGATAATTACT
ATGCCATTCTTTAAAGTCAAGATCAAtgtcatatttatttttgattgcaT
TGCGAACTTCCTTAAACCGTCGTGGTTTCTTTAATTTCAAAGCGAGGTGG
TAGTGAATGCCATGATTTCGGTGCAATTCTGCTGATACAACCCACTTCTC
TGAAACAGAATCATTTCTGTCAAATTCTTGGACCACCATATTTGCAAAGT
GCTCGCGTCCCGGGACTTTCACAACATCAGCCTGAGAGTACGTAATCAAG
TATGCTTCATGtgggtttttctttttgttcttattgctattttcaccttt
gccttttgttttgtttggtttcttgGAACGGGAACTTCTTGCAGTGGCGC
TAGTGTCTAGACCTTGCGCTGATGTTGTGGAAACCTGGGAATCACTGTCT
CGTCCAAGGGCAGCATCATACGATTCAAGGTCTCGGTTTGGTACAGGGGT
AGAGGCGTTTAAGTTGACCACGCATTGCGATAAATCACTTGTGTCATCCA
TTTGTAATTTTTAGTGACAAATACAgagaaatttattgaaaaaggtTTTG
TAAAAGGTTTGTAAAATTGGCACTACCTCTTCAGAAAAGATCAGATTACT
CTTTGCTTACTTTTTAAATGGTGTGAAAGGGTTGTAAAATTGCCACTCCC
CCCTGAGAAAGGATCAGATTAccctttgtttacatttttttcccgCCATT
TTTAGTCTGCCATCTTGTTGCTAGGGACTCTAATTTCGTTGCTATGCAAG
CACACGGCTTTTTTCTGGCGGGAAGAAGCCATGAtagccatttttaaaaa
aaaatttcgcatgTGGTGGGGAAagctctttcaaatttttttttaaaaat
tcagacaatctTGTGCATAATATAATGAGACTTTTTCTATCTAGTTGATC
TCAAAACAAGTGAAAATCCTCCCCCCTGTTTACAAAGCTGTGGTGGTTGT
TTTGCTTCTGCACAGGACCAGCTTTGTAGACTGGGGAGAAGGGTTTTTCT
AAAGAATAGTGtggatttcaaaaaagtcccatatattttgaacttgattG
TAGCAA Coding sequence (CDS) from alignment at sc0000234_pilon:275598..284503+ >MSTRG.19871.1.p3 ID=MSTRG.19871.1.p3|Name=MSTRG.19871.1.p3|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1134bp|location=Sequence derived from alignment at sc0000234_pilon:275598..284503+ (Clytia hemisphaerica_ch_hm2_pilon)
atggcaaaaacaatgaaaggaaagagaaagaagaTGACTTATGCACAGTC
TTGCCAACTACGAGCCCTTGTTCAATATGGAAAAGTCAAGGTACCGCAGA
TTCTACGCAATGAAGGCAACAGGTTTCCCGGCTTCAAAGGAATTCCCAGA
TCAACTATGTATCGTCACAGTCAGATACCGCTGGATGGAAACGAACCTTT
TGACAAACGAAAACAAAACCCTGGCCGAACACCTCTACTTAATGAAAGGG
ACTACCGCGCTGTTAAACGACAGATCAAAATTCTACGTACATTTGAGGGA
AGCTTCAGCTCAAAGAGACTTCAGCTATCGCTACCAGAAATTCAGCAAAA
AGCTTCAAACTCGACATTCAGGAGACATTTAGGAAAAATTGGCTATGGAT
ACCGAAGCACCCGGCGTAAAGGTATATTGAAGCAGAAAGATCTGAAATCA
CGCCTCGACTATGCAAAGCGAATCAAAAGGTTAGGGCTTGGCCTTGAATT
TTGGAAACAAGGCATTAGCTTTTATCTCGATGCAGTAGGCTTTATTTATA
AGCAGAACCCTTTGGACCAGGCACGTGCTCCCACATCACGGGAATGGAGA
AGAAGAGACGAAGGACTCACTTTTGGATGTACGGCCAAAGGCCAAAAGGA
AGGCTCTACCCAAATCAAGTTCATGGTGGcgatatcttttcaacaaggcG
TTGTGCTCTGTGAACAATACGAAAACCGCCTTTGCGGTAGGAAGTTTTCT
ACAATGATTAGAAAGAAATTCCCTGTCGCTTTTATGCTATCAATAAACCC
CAAATCCAAACGTGTTCTACAGGATGGATGCCCAGTTCAAAATTCAAGGC
GTGCCAAACGTGCTTTGGAAAAACTTGGTGCTCACTTGTTTTGTATACCC
GCCCGCTCTCCAGATCTCAACCCGATCGAAAACTTCTTCCATTTAGTGGG
GAAAGAGATTCGCAAAGAAGCTATTGACAAACAAGTAACTCATGAAACAA
AAGAGGAGTTTGCGATGCGGGTTAAAAATATCCTATTGAATTACCCGAAA
GATAAAATAGACAAAATTATTTTGTCGATGGACAAACGCATTGAGGCAGT
AATTGCCAATCATGGCCAGCGTACAAAgtattga
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000234_pilon | genome | sc0000234_pilon:275598..284503 + |
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