|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000234_pilon:5186..8417+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.19860.1.p1 ID=MSTRG.19860.1.p1|Name=MSTRG.19860.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3232bp|location=Sequence derived from alignment at sc0000234_pilon:5186..8417+ (Clytia hemisphaerica_ch_hm2_pilon)
GTTTTACATTAAATTTCTATCAGTCAATTGAAACgtgatattttttaagt
ttaacgAAAGGATACCTTTGTTATCTTTGGCAACATTTAACATTAAAATT
ATCCTTgtttttcaaacaataaaaatcatAATTATTACAAACTTTAAAtg
tctttcaaaaatttaatttagacTTTTCTTGGTATGATTTATCAAAACGA
AGATGAAAGAGTGTCTCAAACGTATCCAAGAAAACCAACCAAAATATGAA
GATGATGGTGAAATGGTGTATGGCGATCAAGGAATAGTTGGATATCAGGT
AAGCTTTtagcaattgaaaaaaaaaacagcaatttCGTGAAATTTAACCA
GAACAATTGTGAAATTAAGTACCCCTTATTAAGTACACATGAGAATTTAT
TATATTACCCACGAAATTTTAGAGAGTTAAGGTATATGTAGAAAGTCTTT
TTATTtgtcttatttatttcttactTTGTAGCTCACAGTTGAACGTGCTG
CAAATGGCCTTGATCAATTAAGAAATGGTTTCACTGCAGAGCAAAGATGT
GATGGTCTTCACGTGGAAGTTGTCGATTTTCACACCTCAATGAAGCTATT
ACAGGTCTCATTTTCTCTCTGTATTGCTTTAGTTTACATACCTTCTCTCT
TTACCTATAATTGTGCTTCCCTttcaatttatatttcaaagatgttttgt
tttttaaattaaaaatgtaaCGTGAGCTTACTTGCTATTGCAGTTGGGTT
CCCTTTCATCTTGTTCTGTACTTGGGATTGACAGGTAAAATTAATGAACC
ATCAATTACTTTGTCATGTTATCTCATTGAAATCTGGGAAAAATCGTATA
ATGATTATGTTCTCTTTTAGCTTACTATGGACAGGTTTTACCAATCAAAA
TCGTCGACAGATAAGTGTACGTTATACTCTGATAAAGTCTTGATCAATCG
AAAGAACTTGAAGAgtgacgtcagcaaaaactaTAACCATTGTAAGAAGT
TTGTCCAACTTGAGCTTGAGGCAAGGATAGTTGCTGCAGCATGCCAAGAA
TTTGAAGTAGAATTCTCAACCAATGCGTTAGACCATGAGGTAAACAAAAT
TGTATGTCTCATTCTAGAATGGATATTATACCTGTGTTTTAAACTTGGAA
TTAGAAACTcttaatttgatattttcaatattttttaagagcTAtttttt
ttagagtcttcagggtgtgatacctcaccctcttggattttgctgaaatt
tagaccaaatgatctatcacacaagaaaataagttttgaagatacagcgt
ctcaaaggtTACTAAGCGatattgacacctaaaaattatgaactctggtg
ggaagcagattttgaaagccaataaattttaattcaagtacattagaaag
ctgatttacagtggatttcaagaactttttgtagggaatcagaaaaaatc
aaattgagtctccaaaattttccccgaaaatctctagcacctcctgtaga
gggcttcaaactttgcgtaatctaggtttggaagcacttttagctggctg
ctgatggtccttgggacttttttgaagtaaacttttgacctggagtggtt
taatggtgggttttggccatcTTTGcataaccgtcaaaaatggccgaaaa
gaTTGCTATTTTGGTAggcctggagcaaaattcaagatggcgtttctttt
taaggcaacaccaaacttttttgaaactttcagcaaggcttccttagtag
gtctagtttatagcctcaaaaaatctcagtgggctTTTGAAGTCTCgtaa
agattgaaaatttgcttaacttcgttgttttctccctcttaaaatgctaa
atcaggcccacttaagggctctaacaggataatttttgtcaaaatattgg
ttgatcttctctagccaactaatcattggcattaggcgaacaactgaaaa
agatttcaggtcatttccatcaacagatgacattttatgactgtttcttt
atttttaagtacataagcaggttacttcaattAAATGggttaacagtact
taattcctattcaaaaactttttagactcattcagaaatcctactttgac
aataatttgcactttaccgcaaaatttctaaatccaagagagactgtcca
atattttttgTTAATGATGAGGGACTACTAATAGTTGTTATCGACCTAAA
CTGGTTAAAAAGGATTAACTATCATACATTCAGGATTGCTGTTATTTTGC
TGTTTGGAAGTTCTGCTATATGTTACTTAAAAAACCCAGCTTTTCCAATT
CATCTCAACATTTTGTTAGGCgaatataaattaaatttttgccaacattt
ttatcattcagcattaaattttgcaaaaggatgaaatcaataattctttt
tAGATACAAGGATGACGGTGTACTGCGCAGAAAGCATGAACTTACCCATA
ATGGTTTTGTTTACGAAGAGCCATCTAGAGCCATCAAGCCAGGTCAAGTA
TGAGtcaaatgatgatgatgatgatgatatgtGTAACTATCAAACTTCTT
TTATGCAGTTAGCCATGGTCATCTACAACTTTCATGACGCGATATCTGAG
GGAGATGGGGACAGAATTCTGCGTCAATGGAAATTCATGCTTCTGTTTTA
TAAAGCAGATGACCCACACAGCTCGAAATACTGCGTTGAGGCATTCTACT
TACTGATCCAATATTACGCTCTCCTGGCCCCACAAACTGCTGAACGCCTG
ATTTGGAATCGCTTTTCCAAGTCGGTTCATGGACCAGGAGAAAATATCCC
ATTGGATATGGCTCTGGAACACTTcaataaaatcctcaaaaacgGCATAC
GAAACATGGGGCCAAACAATTCAAGCCAAAAGGCAGTAGATAGGTTTTGC
AAAGCCCTTGTAATTGCCTTGAATATTAACAAAGCGATTCTTGAGAACTT
TGACTAAACTTGTAAATGTTGGCCACCATCGCGAAATCAAGGCAACAGAT
GAACTTTTACATCAGAAAGCCTTGACAGTCTCCAGTGAGCCAAGGCAATA
CAATTTCTTCAAGGCTCTTAGCCCGAGTTTGCTGGACCAATTCAACTTCC
ATAAATTGTATGAGTGGAttgacaacaacaaaaaaacatcaTTACTCTTA
GAGCCGCAAGATAGACTCATTCTTTTCATTTATTCTCTGAAATGAAAACA
ACGTTAATATTATTATTTCTTAGAAGCAgtgg Coding sequence (CDS) from alignment at sc0000234_pilon:5186..8417+ >MSTRG.19860.1.p1 ID=MSTRG.19860.1.p1|Name=MSTRG.19860.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=546bp|location=Sequence derived from alignment at sc0000234_pilon:5186..8417+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGACGGTGTACTGCGCAGAAAGCATGAACTTACCCATAATGGTTTTGTT
TACGAAGAGCCATCTAGAGCCATCAAGCCAGGTCAAGTATGAGtcaaatg
atgatgatgatgatgatatgtGTAACTATCAAACTTCTTTTATGCAGTTA
GCCATGGTCATCTACAACTTTCATGACGCGATATCTGAGGGAGATGGGGA
CAGAATTCTGCGTCAATGGAAATTCATGCTTCTGTTTTATAAAGCAGATG
ACCCACACAGCTCGAAATACTGCGTTGAGGCATTCTACTTACTGATCCAA
TATTACGCTCTCCTGGCCCCACAAACTGCTGAACGCCTGATTTGGAATCG
CTTTTCCAAGTCGGTTCATGGACCAGGAGAAAATATCCCATTGGATATGG
CTCTGGAACACTTcaataaaatcctcaaaaacgGCATACGAAACATGGGG
CCAAACAATTCAAGCCAAAAGGCAGTAGATAGGTTTTGCAAAGCCCTTGT
AATTGCCTTGAATATTAACAAAGCGATTCTTGAGAACTTTGACTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000234_pilon | genome | sc0000234_pilon:5186..8417 + |
|
