MSTRG.19845.1.p1 (mRNA) -

Overview
NameMSTRG.19845.1.p1
Unique NameMSTRG.19845.1.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000233_pilon:337090..338175+

Legend: exonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.19845.1.p1 ID=MSTRG.19845.1.p1|Name=MSTRG.19845.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1086bp|location=Sequence derived from alignment at sc0000233_pilon:337090..338175+ (Clytia hemisphaerica_ch_hm2_pilon)
CTCGCATGGAGATTTAAAGGATGAAGCATCTAAAAAGCCACTCGATAAAA
ACTCTAAAGCGATGGAAGCACTGAGGAATGCTGTTCTTGACAAAACTTTT
ATTGACAGTCTCAAGTTTTACACACGTTTCCGGTATGTACTTTTGGTAGC
TTTTATCTTTCGCACTCATAATCTGGGTTGGGACCGATCGATCGATACGA
CTTTCTCTGTTCCAAGACAATTGGGAGCTTTTTGAACAAATAAATACAGC
ATCGAACAGATAGCTTTATAATGCTAGGTAAATTTAGTTTATTCAATAAA
GAGTCtcaattttggatttttccAGAAATTCCGATTCTTATTTATTCTTC
ACCGTTTTCCTACTAGACACACTGGACAGTTAGAAAGTTTCAATTCAATG
CTTCTCAAGTATGCGCCAAAACGCGTTGCATTCAGCTATAAATACTTTAC
TGATCGCATGTTCCTGGCAGCTATGGACCATAATATTCATCTTTCCCGGA
AGCCTGTTGTTACTAGATATGGTAGATATCTCCAAAGACGAAAGTTTAGC
AAGCGCTCAAAGCAGTGGTGTGCACAATCGGTCAAGAAGGCAAAAAATTA
TCCCCACTTACCCACCCTTTTGGCTGCCATCTTGAAGAGACGACGCAACC
ACACCGAGAACGTTGGTAATGCATTGAAAACACACTCTATGCCTAGTGGC
GTCACCGTACCTACGCTTGGCGGTGTCCCACCAAAAACATCGGAATTGGT
TGAGAAGCATGTTTCTCGGCTCACCAAGAAATAGCTGttattaaaaagat
tttattttcgagatttttgcccttcttatgaaaatatatttttgtttagG
ACGTTTTCTTATTTCAGGATTACGTAAATGTATGCGATGGAAAGATTTCT
GGGCAGTTTGGGAccttttctttttggatttaGCACTCGTATCTCCATCT
ATCCTACAATCATTAGAGTTTGTTGTTGGGAGGATTCTTacagttttata
tttttgaaagtgtGGGATATGCTAGACTGTCACTCTGTAAATAATGTACA
TTTTGGTAGTTGTAGAATTAGATTTATTGAGGTATA

Coding sequence (CDS) from alignment at sc0000233_pilon:337090..338175+

>MSTRG.19845.1.p1 ID=MSTRG.19845.1.p1|Name=MSTRG.19845.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1098bp|location=Sequence derived from alignment at sc0000233_pilon:337090..338175+ (Clytia hemisphaerica_ch_hm2_pilon)
TCGCATGGAGATTTAAAGGATGAAGCATCTAAAAAGCCACTCGATAAAAA
CTCTAAAGCGATGGAAGCACTGAGGAATGCTGTTCTTGACAAAACTTTTA
TTGACAGTCTCAAGTTTTACACACGTTTCCGACACACTGGACAGTTAGAA
AGTTTCAATTCAATGCTTCTCAAGTATGCGCCAAAACGCGTTGCATTCAG
CTATAAATACTTTACTGATCGCATGTTCCTGGCAGCTATGGACCATAATA
TTCATCTTTCCCGGAAGCCTGTTGTTACTAGATATGGTAGATATCTCCAA
AGACGAAAGTTTAGCAAGCGCTCAAAGCAGTGGTGTGCACAATCGGTCAA
GAAGGCAAAAAATTATCCCCACTTACCCACCCTTTTGGCTGCCATCTTGA
AGAGACGACGCAACCACACCGAGAACGTTGGTAATGCATTGAAAACACAC
TCTATGCCTAGTGGCGTCACCGTACCTACGCTTGGCGGTGTCCCACCAAA
AACATCGGAATTGGTTGAGAAGCATGTTTCTCGGCTCACCAAGAAATAGT
CGCATGGAGATTTAAAGGATGAAGCATCTAAAAAGCCACTCGATAAAAAC
TCTAAAGCGATGGAAGCACTGAGGAATGCTGTTCTTGACAAAACTTTTAT
TGACAGTCTCAAGTTTTACACACGTTTCCGACACACTGGACAGTTAGAAA
GTTTCAATTCAATGCTTCTCAAGTATGCGCCAAAACGCGTTGCATTCAGC
TATAAATACTTTACTGATCGCATGTTCCTGGCAGCTATGGACCATAATAT
TCATCTTTCCCGGAAGCCTGTTGTTACTAGATATGGTAGATATCTCCAAA
GACGAAAGTTTAGCAAGCGCTCAAAGCAGTGGTGTGCACAATCGGTCAAG
AAGGCAAAAAATTATCCCCACTTACCCACCCTTTTGGCTGCCATCTTGAA
GAGACGACGCAACCACACCGAGAACGTTGGTAATGCATTGAAAACACACT
CTATGCCTAGTGGCGTCACCGTACCTACGCTTGGCGGTGTCCCACCAAAA
ACATCGGAATTGGTTGAGAAGCATGTTTCTCGGCTCACCAAGAAATAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.19845MSTRG.19845Clytia hemisphaerica_ch_hm2_pilongene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.19845.1.p1.exon1MSTRG.19845.1.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.19845.1.p1.exon2MSTRG.19845.1.p1.exon2Clytia hemisphaerica_ch_hm2_pilonexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.19845.1.p1MSTRG.19845.1.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000233_pilongenomesc0000233_pilon:337090..338175 +