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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000233_pilon:190922..198925- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.19838.1.p1 ID=MSTRG.19838.1.p1|Name=MSTRG.19838.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=8004bp|location=Sequence derived from alignment at sc0000233_pilon:190922..198925- (Clytia hemisphaerica_ch_hm2_pilon)
ATTATATCGAGCTGTCTCTGGAGACTTCTCACATCCATCACTATACAGGT
CAATTATATTTATCATTTATTTATTTGTTGTGTCAACTTCAGTTTATCTT
CCTATTGTGTGAAAGGCTTAAAAGTGTTTACAAAAATGAATGTGGGTGGG
TGTGTGGGGATGGTTCATGCATCATGGTCAGGATTAGAAACTAGGCTAGT
CTTACCTCTATTATCTTTTCCTTTACAACAATACAATGCTGACAAGTTGA
CACAACACATGAGTACATTTACATTGACAAGTAATCCCTTAGAGAAGTTT
TTATAGAAATCTGAAACGGACCTTCTTTTTGGCACCCCTGGTAGCTAGCG
ACTCCAGAAAGTCAGGCAACTTTCGTTGACGTCAAACCAAATGTTTTATT
TTCCCGTAAACTTTGAACCCTTGGGACTTTATTTTTTCTATGTATGCTAA
AGCGTTCCGGTTTTTACTAAATGAAAGCCCTTGATCTTAGCTTTCCAGCG
GTATATAACACTGTGGATAGGGTGCGCACTCGTTGGGATTTTTTGCGCGG
AACGAGGAAGAATTTACAAAAATGAACTTCAAGGCATTAGCAGTGTAGCT
GGAACCTCGATATTCCAGGATTAGAAAAAGCTATACCTGTTATCTTTTTT
CTTTAAAGAATCAACAAGCCATCAACATTGATAAATTACAAACATTTTCC
TCAGAAACTTTTAAAATTATCTGCCATTATGACTTTCTTGAAGCCGTTCC
GAAATTAACCAATCAGGTTAGGTATCGGAATTCCTATGGGAGTTCTTTTC
CGAGATTTGTAAAATAGCTAAGTCGGCAAAAAAACTTTTTCCGGGGTTTT
GTGGAATAAACAGAACTGTTATCGTTTGTGTTTTATTTAACCAACAATTT
ATATTTGCGCTCAAAAATACTTAAATGAACAAGTTAATAACATTCAATAT
ACTATTTGTATCTCTTAGGAAATAAACACTTACAGAACGACATAGTTTAT
CATTTGAAATACCCCCGTGTTTGGGCAATTCTATCGTGGGCGCCAAATAG
GGCGGAAACTAAGTAGCACCCTCAGTGCAAGATTGCCGCCTCATCTTTAT
TCGCCCGCGCGAAAACGCGAGCTAATCATTTTTTTCTCGCGCGCTTAAGG
GGAAAAGGAAAGTGATCGATATTCTTTGAAGGAAAAACGTCAGAAACAAA
CCCAAAGACCAAAAGATGCATTTTGTTGTTAAGAATCGATCCTGTGAAGA
TGAAAAAATTTCTGCTCTGCATTTTTTTCGGAACGCTGAAAAACTCTAAT
TTCGATCTTCCTTAAGGTAAAGAGGTTGCGAGATTTGGCTTAGCGAGGCA
AAAATCACTAAAAAGCTGGTAAAATCATAATCCTCAAAAATCGAAGTTCC
AGCCTCACTGATTAGTACTTACCTTTAAATCATCCAAATGTGTTCATTCT
TTATTTTAAATCAATCAGGAATTATCAGGGAAACAAGTAAAAAAAACTGC
ATCCAGGTATCTATTTTCTTTCCAAAGATACTCATGTTTTTCGACGTCAA
GGTGAAAACGCGATTTAGCACTGACCACGGCACCGGAAAATTCTCGACCC
ACGTTGAAACAAATGGCTGTCGCTATTGAGCTGGTTCATCTTTTCAATTG
CGGTTTTTTTAGTAAACCCAGGGTAAGATTAGGCTACAATATATCACAAC
CTGCTTTATTTGAAAATCTACAGGCCGTCTGGAATTTCGAAAATAAGAAG
AAATTGCGATTTTTTAACAAGATTGCGGATTTTTTCATTTAAGCACCATA
CACCATCTGAAAGCTGAAGATTTCAGCTTTCTAGTGGTGAAATTTGTTTT
TAGCTATCATTTCCAGCTCATTAGTGATAAGCTAAAGTTTAACAGTCATC
GGGCCGATTTTCAGACCGCACCGGCAAAACTCCCCACACCCCGCCACACG
GAAGACTAGATTTCATCCGCAATTTTTGGCGCGATTTTGGTGCTTCCGAA
AATTAATTCTTGCTGGCGTGGTGTAAGGAGGCGATTCTTTGAAAAGGTGA
TTTTTTTGTGTTTTGATTGAAAATGGAATAACTTTGGGAATACTTAACCA
ATTTTAATAAATGACCCCTCATTTTTCTCACAAAGGTAAGGACTTTCAAA
TAAAATTAGTTTGGTTTTTTAAAATTGAGGGGAAAATTTTGTCCTGTCCA
AGTTTTGCAACATTTTGAAAATTGTTTGCCGACGGGAGAAAAGTAATTTG
CAACTATCGATGAAAAAATGTGTCTGGAAACGGAGGAAAATGTATTTGAA
GGCTGAAACTTTGTATGTTTATCAGAAAAAGGGTGAGGAATTCAAAAATC
ACATTCGCTAATTTTAGTTCTTTCATTTTCATGTAGTTTTTTTCACTTTT
TTGCTTCTTTTGCATGGGAATGTCCCAAAAAAAAGTTTTTATTTCTGCTG
AAATGGATTTTCTTTTCATTTGGGGTTTCTCCTTTCAGAAAAACTTATTC
TTTACTCATAAGTTTTTGTTCCTCCATTTCCAGAGGTCCCTTGAAAATGG
GTCCTACCACCTTTTTTGACTCATTTCAACCTTTTCCAAGCTATTTTCTT
CAAAAACAAAAATAAAACAAAGCAATGTCTTCTTTTTTCAAAAAAAGATA
TATCTTTCGATATTTTGTTAATATATACTAAATATTTTACAAATATTTTT
ATATAATAATGTTTTAACACCATCAAAGAATTCTCCCTCCAAATTTGAGG
TCTCTAGCTACACTAGAAAAAGAGATATGCAAAATTTAAGAAGCATGACT
GGAAAATTTCTTTTCTTTCTTTTTTGACACATTTTTCGAATTTTTCCAAG
CTATTTTCCTAACCTTTTTTTTGACATTTTAGTCAAATTTTTGACACTAA
AATTTGAATATCTTTACAACCACTTATCCTCTGGCTGAATTTAAAAGAAG
AGGGGGCTTGTGAAAATTTTAAATAAAAGTGAAGGGGTGGCTTGGACAAA
AAGAGGGGGATTAATTTTTTAAGGGAGGGGTGGGCTTCGAAGATTTTGCA
ATTTGCAAAAGAGTGTTTTCCATTCATTTTTAAGTTTCTTAACAATTATT
ATATTTCCCTACTATGGTGTTGTAAAAAGAAGATTAGCGATGGCTGCTAA
TAGATACAAATCCAAAATCATAGCATATATATGTAGTAACTGTAAGGCGG
CAATCACAAATATCTTCATTTCGCGTCCTCGTTGGGTCTAAAAAGTGAGT
CCTCGTTGGGTCTAAAAAGTGAGTTGGTCGGTCGGTCCTAAAAATTTTCG
GGTTTTCTTCTTCTCGTCCGACCTCCATCATCCATTTTTGTAGTGTATTC
TTGAAGGAAACTGCCAGCCAGCCAGTCAGCAATCAGCCAAAACAACCGCG
TGTTATAGGTGGTTTCAAATTATGACCTTTGAACACTGTGACCTCCAACC
CAAAATGGCTCAGTAATGATAAACAAAGTCAAAATGCCACGAATGCACTA
GAAATCGCTCGCAAAATTTGGCAATAATAAAATTTTTGAACGAAGGAAAC
GTCATTGACAGAAAAAGTTTACCAACTCACCAACTCAATTCTACTCAATT
TTCGAGAGTCGGTTGGGCGACGCAAAACAAAGATATTTGTGATTGCCGCC
TAAGTGATTAGTAGTTTCTAAGAGTTTTGGTGATACCCTCAGGATGATTT
CACTTGAATTTATTTTCGATTTTGAAGGGATCGTCAATAGCGCAGGATCT
TTTTTTGAAAATAATTTACTGTAGTTCAAAATATTTGGAATCAAAATGTT
TTAATCCAGACGGTTCTAAAATGTTCGATTGTAATCAAAGTAATCAATAA
TAATCGATAATAATCTAATGGTCAGTGACAAGAGCAGCCACCGGCTAAGA
AGTATGAAATATCTGTTCTTGAGGTCTGAAACCAAGTTTACTTCGACCAA
TTAAAACACACGATTCTCGCGCGAAAACCACTTATGTGATATGAGTTACT
TGAGGAAAGTAAACCCAGTCAATCTTAATGGCATGGCTGGAACCCCACCC
CCCCTGGCCTGAGGGGGGGGGCTAAAAGGTCAAGCAGCAATTGGTACCTG
GTTTTAGCCTGTGGCTAGGGGGGACTAACCATGTTAGGGGTCACCTAAAT
TTTTCCAGATGGACCTGGGGGCTAGATTCTATGTTTGGTGATTGAATTAT
AAGCAGCCTACCAGACCATAGGTTGGCACTCAAGAACAGATATTTCATAC
TTCCTAGCCGGTGGCTGTTCTTGTCACTGGCCACCAGACCATAGGTTGGC
ACTTTCTCATCTTATATTTTAATCTAAGCGATGCTCAAAAACTGACAATT
TGGTATCTAATATATTACCTGCAGTGCCGTAGCAACTGGGGGGGGCTATA
CCCCCAATAATTTTTTCAAAAATGGTTATTTTGCAAAATGCAAAGTTTTT
TCTTTTTTAATTTGTCATAATTGTATTATAAGTGCATGTTTTGAGTGCAT
TTTCAAGCAATCTAGAGCTCAAATTTTCAAAATTTTCCCCCTTGGGCCAA
ACCATGGTTAGCCCTCGCGGTGTCACTAAACTTCAGCCCCCCTAATATGA
AAATGCTTCCTAGTGCACTGATCTGTAAAATTTCTTTAATCCTGTTGCAT
TTGCTTAGATATTTCTTAGGGCATTTATTCTATTTAGCAATTTTCGAAAA
ACATTTGACATGTCATTGGCTTGGGGGGTCACCTAAAATATTTGGCAACC
AGGGGTTACCTAAATCTTAGGGGTCACCTGAATTCTTAGGGGGCACCTAA
AACCTGCTGCCAAGCCATGGGTGGGGCTTCTTTTTGTTCTTTGGTTTTAG
GTCAATTTTTTGGTTTTTCTTAAAGATATATCATAGTAATTGGTTATCAA
AGTTGTCAAAGTTATCGAAAGTAATCAATAACAATCAAAGTACTCAAACG
GTTATCGAGTCTTCTAAGGGTTTTTAAGAAAGTGATTGAATACTCAAAAT
TTTTTTGAAATTTTGGTACTCAACATTCGATCACTATCGATTCCTTCGAT
AATCGAATTTATCGATTAGTACTGTTTGGTTCAATGAGGGGATTAACAGT
GTTATATAGTTTCTTCTAATAGATCCCTTCTTTACTTAAAGGGATAATCA
GATGGTCTGAGATATTTTGCCTGCAGATAGCTTCTAGGATTTTAGGAAAA
ACCTCTAAATTTTTCAGTGTACTTATTTTCCTAACTCAAGTTATGCCACT
TTGAAATTTTGAACCTTTGCTTGAAAACAGTAGAAAAAAGTGTGAAAAGT
CCCTGAAAAGTCCCATTTTTCGAGATTTCAAAGTGGCATAACTTGAGTTA
GGAAAATAAATACTCCGAAAAATTTAGAGGTTTTTCCTAAAATCCTAGAA
ACTATCTGCAGGCAAAATATCTCAGACCATCTGATTATCCCTTTAACAAT
CACTGCACCCTTGACTAAATCTACAAATTCACCTAAATTCCTGATAGTAG
GCAAAGTGGCTGAGCGGGCCAGGCCATATTTTAGAAAGGCGGGATAGCGT
CCGTTGGTACCAAAAAGGGCACTTTTTGAAGTGTTTTACCACGAAAAAAG
GCTGTTTTTACTGAAATTTTAGTGATTTCAGGAGAGGTAGTGTCCAATAA
GGGGACGTTAAAAGGGCAATAAAAATGGTCTGGCCACAACTATTGGAAGT
TATAAAAACTCCCTACATTATAAAGATGAACAATATTTGACGTCAAATCA
CAATGATAGGGAACTGGTCTTTGAATGACTATTTATCTTTATGTTTTTGA
AGAAGATGGTTATTATTGTAATACATTTTTTAACTCAGACTGGGCTTAAA
AAATTGTTGCTTTGCCGTCACCCGACCCTAGATTTTGGAGGTGGCGGGTC
GGTCGATCGGAATTTTTTTTTATTTTGGCGATTTATGAAATTTTCGTCCT
TCCATGTTTGTTTACATTTAGGTAATTTTGAATAAAAAACAGAAGTGCTA
GCTGGGAATTTACGATTCTTATGCTTGAGACAAACAAGATATGAGTTTTG
ATTTTTCATTGTTTGAAGTTTTTGAAGGAAAAAAAATTTTCTTGAAAATG
GCAATAAAATTTTTTGGGTCGGCAGGTTTCGAGGTAGGGTTGGTCTGGTG
ACGGCAAACCAACAATTTTTTAAGTCCAGCCTCAGACAGTGTCAATCATA
CTAGTTTATTTTGACTTTTGAAAATCAGCTATTCTTCTATCTAGCCCTTG
TTGTCCCTTGCATTTTTTGTCTATGACGTCGCATTTTTAGTCTTATAAAA
TTTTCCCACTGCTGATTTAGGCCCTCCTTCAATAATTTTGTTTATTAAAT
TAAAGTCTATCATAAGACATTCTATCTAGATTAATCAGAGCTATATTGCA
ACATTGTCTAACACAGTCATCATCTCTTTTTCAGGAAATATTTATTTAAA
AAATGAATTTGTTGTAAACATTAAAGCAATGCAGTGTCATGAATACGACA
CAACCTTCAGCAAAGAAATACAAACTTGTATTCCTGGGCGATCAAAGTGT
CGGTAAGACATCCTTGATAACACGTTTCATGTATGATAGTTTTGATAGCA
CATATCAAGCAACTATTGGAATTGATTTCTTGTCAAAGAAACTTTCTGTT
GACGGTAAAGAGGTAGCTCTACAGATATGGGATACTGCAGGGACAGAACG
TTTTCGTAGCCTCATTCCAAACTATATAAGAGATCTATCAGCAGCAGTGG
CAGCTTATGATATTACTAGTATGTCATCTTTTGATAGTGTTCGAAGTTGG
ATAAATGATATCAGACAAGAAAAGGAGAATGTTTTGATTGTTCTTTGTGG
AAACAAGTCAGACCTGGCTGAAAAAAGGAGAGTTTCTTATGAGCAAGGAA
TGAGATTAGCAGAAGAATTGGGGACAATGTATATGGAGACATCTGCAAAA
ACTGGAACCAATGTAAAAAAACTATTCCGAACAATAGCAGTAGCTTTACA
TGAGGGTGTGGAGAACAGTATGCCTCAAGAACCCAAGAATCATATTGTTA
TTGGCTCTCCGTCGCCTGAGCACAATACTGGGGAGGGGTGTTATTGCTAA
ATTAAATGATATTGTATGGTATTATCTGTTGGAAATGGATATATGTATCG
AGTTTCATTTCAAATAATGAAAGTACACCGATAATTCTCTTCTTTTTTTA
ATCTGTTCAAATGTGCAAATCTCAAGTTTAATTGATCACTATTAATTGTT
GTTGTTGTGTTTTGTTGCAGTTATAAATTTTCATTTATTCTTTTTTATTC
GAGATAACATTTTTTTGTTTGTAGATAAATCTAAACCGATAGTTGAGTAC
ATATTCTTGTCTTTTGTTGATCTTTTTTTAATCTTTTCTATGTCGTTGTA
TGAAAATTCTGTTGTTTTTGCTGTTTTTTTTTCTATTCTATCTTAGATTT
GTTTTAAATTCGTTACTGTAATTACCATTCTCATTAAAAACATCCCTTTT
TAAGTCAGGTTGGTTCCAGGTCTACTTTTAAAGATATGTTTTGTTCTTTT
GAGATAAGCAATTTAAAAAACTTAATATTTCGAATATTTAGAATTCTTTC
GCTAATTATTTTCTAAAACTTTTTTTATTTCCATTATAATTCATTTTTTA
TGTCACTTACAGCTAGGATTAACATTAGGATTTATACTAAACACTAAATT
TTTAAATGAAATTCCTTTTTTTAGATTGTGAAATATTTCTGTTTATAATT
TTCATTTTTCAGTTGCATTTAGCAGAAGTTTTTCTCCCAAAGAAATGATA
CCATAGAATAAAGTGATGCCTATTTTGAAAAAATAGATTAATAGTGCTGC
TCTTGTTTCAGCTAAATATTGAAAATATTACAAAAGGGTTGGTAGTACAG
TAGGTTCTGTAGCTCATTATATTGTTATTATTTTTAACACCTATGCTAAA
ATGTAATACATACTTTCAGTTCAAGGTCGAAGAAGAAATTCATTAATATA
TTAG Coding sequence (CDS) from alignment at sc0000233_pilon:190922..198925- >MSTRG.19838.1.p1 ID=MSTRG.19838.1.p1|Name=MSTRG.19838.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=612bp|location=Sequence derived from alignment at sc0000233_pilon:190922..198925- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAATACGACACAACCTTCAGCAAAGAAATACAAACTTGTATTCCTGGG
CGATCAAAGTGTCGGTAAGACATCCTTGATAACACGTTTCATGTATGATA
GTTTTGATAGCACATATCAAGCAACTATTGGAATTGATTTCTTGTCAAAG
AAACTTTCTGTTGACGGTAAAGAGGTAGCTCTACAGATATGGGATACTGC
AGGGACAGAACGTTTTCGTAGCCTCATTCCAAACTATATAAGAGATCTAT
CAGCAGCAGTGGCAGCTTATGATATTACTAGTATGTCATCTTTTGATAGT
GTTCGAAGTTGGATAAATGATATCAGACAAGAAAAGGAGAATGTTTTGAT
TGTTCTTTGTGGAAACAAGTCAGACCTGGCTGAAAAAAGGAGAGTTTCTT
ATGAGCAAGGAATGAGATTAGCAGAAGAATTGGGGACAATGTATATGGAG
ACATCTGCAAAAACTGGAACCAATGTAAAAAAACTATTCCGAACAATAGC
AGTAGCTTTACATGAGGGTGTGGAGAACAGTATGCCTCAAGAACCCAAGA
ATCATATTGTTATTGGCTCTCCGTCGCCTGAGCACAATACTGGGGAGGGG
TGTTATTGCTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000233_pilon | genome | sc0000233_pilon:190922..198925 - |
|
