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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000233_pilon:175045..180811+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.19835.8.p2 ID=MSTRG.19835.8.p2|Name=MSTRG.19835.8.p2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5767bp|location=Sequence derived from alignment at sc0000233_pilon:175045..180811+ (Clytia hemisphaerica_ch_hm2_pilon)
CAgttttatcttcgataattttgttcttttagttttcgtttttggaattt
tgttgGTTATATTATAGTCtataaaaatagcaaaatttgaaTTACAAGTA
ACATgttgaaagttgacaaaaattGATTGTATGGTCGAAAAAGgactttt
aaaatgaaatttaaaggttGGTATTACATGTGGCATGTTTCGATTATTAA
GTGTTAATCTCTTATAACCCTGAAGCTAACCCTCTCTCGGGAGAGATCTT
AAGGAAGGAATCTTAAgaaattactcttaggtgccaaataaacgcccccc
ccccgcttgttaatctttcgaaaattttccaaccccgcccccggacctta
ttaggacccccccccccccccccccgttaccccgtttattaatttttaga
aatattttcagctgtcaaagagaaggccccttatatttctctaaatagcc
tgattttagcctatatttaccttattttttgggttttcagaagtacaatt
tccaaccccccccccccggcaattaggtccccccgtttattaaaatctca
aaaattttccccccgtttattcgaacctctCCCGTTTATTTGGTACCTAA
GAGTAGGTCATTTAGAAGGCGGCATCCTTCATTAAGCCAAAAAGATCGGA
ACCGCACCATCACACAAAGAAAAACTCTGGTCATACAGCCCGCTTGGGAC
CCCTCTTTAGATTCGAATTTGATTAAAGTAGTTCAATGCAGTGATctaca
accccttctcacagacccacttgaAAAATCGACTCAAATATCGTCCCCAG
AGCAAAGTTACACTCTCGTTacatttttgtccccattgaattttctggct
cgaaaacaatggaattcaaatccccagcaaaaaaaacatgggaaagtaca
cgttttttttttattagaacacctaaaatttggctgagcttgaatgtgct
tattttttttagcaattttcagcctaaaatgttcttaaatgcgttcttaa
tttttcagactactctaaatcgacaatatgatacaaaataaagagcactt
aaatttggcaaaatttggacaatattcgactctcgacttttgaagatcca
cccctaaattcggttaaaactgcttaaaaagagggaaaaattgtagtttc
tcgtcatttttttccaaactgaggctgggcatgttcttaagatgttctta
atttttcgacgaatttcagcctatatgttcttataagctaggttctaaaa
aaaaaaacgtgtatccccatcaagttttggtccattatttttacccccac
tggctgaaaaaaatcctaccgagtctgtgagaaggggatgtattACTATA
TCAAATTGTAACTTCAGTTTGTTGCTTGTTAGTGTGTCTATGTTAGCTAA
TGCTTGAGCTTTCCGGGATGGGTTCGATTGAAGACCTCAGTCTGATGCCC
TGTTGATTAGTGCTCATCAatcaaaaagaaagataaagGGTAAATCGAGT
AAATCACTCGCCTAGACGAGAATCAGTGTATTAATTTGTCTTTTCATATT
GCTTTACTTTCAGCTATCGCATTGATAGTGTTTGTAGCCATTCAGCAATG
TATTGGTGTGAAGAATCATCAAACTTTCTTCGGGATATACGGAAAGTTTA
TCCCAGCCAATAACCAGGGTAGTGTTAAAGGTTCACAAAGAAACATTTTA
CCACGTGTCAATGGCGAAGAGGGAGGGGACGTTAAACTGACCCTCGGCCC
CGCCATAAAGCCCATCAAAACTCGCGATGGACCATTCCAACCGAGTCAAC
AAGTCAGTGAGATCATTGGCCAAGTGATGCATTTCGACGAAAATATGTTA
AACGGGCGTGGTCCATCTGTTGCTCGACATCACCCAGCACCCTCCGCCCA
TCGAGAGGCGGAAGAAGATGAAGAGGAACAAACACCGCCCAATGATGAAT
TGGCGTCTGAACACGGACCAACTTCACAGGAAGAAACAATAGAAAACGAC
GATTACAACAACGTGGAGAAAGAAGAGTACATCGCGAAAGGGCGTGAAGA
AAGCATGCATTTCTCAAAATTGTTAGACCAATTAGAAGATGATCCTGGAC
TTGGTAATTCACAGACCGGAAACTTAAAACCGACGCATAAGCTTGAACAA
GGTCGTCTGTACAATGGCTTCAAAGCAACGCCTAAATTAAAGCATCCTTT
GATTCACCGTAAGAAAGGATGTACGGGGAAGAGATGTGATATAGCAGGGG
GATTTTTTGGCGCAACTGATGGACatttcgaaccaccaaatgaaGATGAA
GTACCTTATGATGTAGGAGGTAATAGAACCATTATAATTTCGCATTGATT
CAATAATCAATTAAATACGGTACAAACATAGGCCTTGTATGTTCCTCATA
CATTTCTTACAAAACCTTATTACAACAAATCTGCAGACATGGTGTAAGTA
CTGTGAAACGATATTGAAATAATTTCACTGTAAAATTCTTTGCGTGTTTA
AAACTTAAATACATGTTTTCTTTACGAATCTTTTGATTAAAACCACACCA
TTTCTTTTATTGCAGACACTCCAATCATTGGCGATGCAGAAGGTCCGGTC
CAAGATGAAGCTATGATGGCTGATACTTTATTTCACCTTCACAAAGTGTA
TGACAAAGAGAAACAGGCCTTAGAATTGCTGGGCCACCATAATGGACATC
ACTTTCACCACGGATGTAAGTTTGGACATTTAAAGATAACCATCATCATG
GCTCGACCAACAAGGCTTCTCAAAACATGAATGAAGTGTTCTAAAAATTA
TTATGTTCTTCTTTGTAAAGCAGCTAAATTGAGTCTGGTAGAATTAAATC
ATATTGTCAAAGGACAgttcctttttaatttttagtggAAATTAAAAGGT
TAAGCGATAACGTTAGTTCTCCTTTAACGAATTCATTATTCCATTCTTCT
CATTAGTTGGAGGTCATTACTACCATGAATTTCCACACCACGATGTCCAT
GACGCGCATGACGAACATCATCACACTCAAATGATCCCCATCGGTATCGA
ACTACCTAATCACTTGCATTCTCCACAGAACTTTCGTCACCATGGTGGTG
CTACCACTGTGGCTGGAGGTGCCGCTGGTGGAACTGTAGCAGGCGGTGCT
GCTGGTGGGACAGTAGGAGGTGGAGCAGCTGGAGGAGTTGCCGGTGGAGG
TGCACCCGGAGGAGTTGCTGGTGGAGCCGCTGGAGGAGTTGAAGGTGGCG
CTGCTGGCGGAGCCGCTGGAGGAGTTGAAGGGGCCGCTGGAGGTGCAGCC
ggaggagtcgctggtggagccgctggaggagcagctggaggagttgaagg
tggagctgctggaggagTTGAAGGTGGAGCTGCCGGAGGAGTTGAAGGtg
gaGCTgctggcggaagtggagctggaggaagccgctggtggagctggagc
tgctggcggagTTGAAGgtggcgctgctggcggagtgctggagctgctgg
gaggaggctggaggagtctggtgaggtggaggcggatgctggaggagttg
aaggtggagCCGCTGGCGGAGTTGAAGGTGGAGCTGCTGGAGGTATCGAA
GGTGGAGCTGCTGGAGGTATTGAAGGTGGAGCTGCTGGAGGTATCGAAGG
TGGTGCTGCTGGGGGTACTGCTGGAGGGGCTGCCGGGGGAGCTACAGGTG
GAATAGCTGGAGGTGCAGAAGGAGGGGCTGCGGTGGAGGTGGCGCAGGAA
GTGAAGCTGCAGCTGCTATTGGAGGAGAAGCTGGAGCGGCTGCAGCTGGA
GGAGCAGAGGCTGGCGGAGCAGCAGGCGGATCTGTAGGAGCTGAAGAGGG
AGCAAAAGAAGGGGCTTCTGAAGGTGCAGCGACTGGTGCAGCTGAAGGGC
GGCAGCAGGAGCAGCTGGCGGTGCAAGTACTGGGGCTGCAGAGGGGGCTG
TGGAAAAAGTGGCAGAGGCTGTTGCAAGTGGAGATGGTGATGATCCAGAA
AAATTAGTGTCTGCAGCAAAAGAAGGCGCTTCAAAAGGAGCCGCAGAGGG
TGTTGCTACCGGGATATCAGAAGGTGCGAAACTCGGCGCAGAAGCAGGAG
CTGCTGCTGGTGGTTCACAAGGAGGAGCTGCAGGTGCAGCTGAAGGATCT
ATCCAAGGAAATGCAGCAGGAGTAACTGGGGCGATGTCGGGAGGAGCAGA
AGGAGGTGCAGCAGTCGGGGAGCAGCTGGAGGTGAAGCAGGTGGCCAGGC
TGGTGGAGCGATCGGTGCTTCTGCGGGAGGCGCCGCTGGTGCTGCGGTGG
GTGCGGCAGCAGGAGAAGCAGCCGGTGGTGCAGTTGTTTCAGCTGGAAAG
TTATCTGGAAAAGTAGAAGGCTCCGCAGCAAAGGGAGCAGCTAAGCTAGC
AGGTGCAGCTGGTGCTATGCAAGCATCAGGAGCTGCACAGACTGCTGGTG
CTTTGGGTGCAGCTGGAGCCGCTGAAAGTGCAGGGATAgcaggtggtgca
gctggtatggctgcaggtggaggaggtgctgcggcagcTGGtggtggtgg
tggtTCGATTGCAGGAGGAGGAGCTATGGCTGCTGGCGGTGCAGCTGGTG
GCTCGATGAAAATTGGGGGAGGGATCACAGGAGGTGCAGCAGGAGCATTG
AAAGCTTCAGGAACCGCAGGTGGAGGAGGTAGTATGAAGATTGGAGGTGG
TATGGCAGGTGCAGCTGGAGGAAGTGCAGGAATATCAGGAGGTGCTGGAG
GTTCACTTAAGATTGGAGGTGGGATGGCAGGTGCAGCTGGAGGAAGTGCA
GGAATATCAGGAGGCGCTGGAGGTTCGCTGAAGATTGGAGGTGGGATGAA
AGCGTCAGGAGCTATATCAGGTGGTATATCAGGTGGCGGCGGGTTAAGTG
TTGGTGGTGGTGGTGCCATGAAAATTGGAGGCGGCGGTGGGTTGAAGGTT
GGTGGTGGAGGGGCAATGAAGATGGCCGGAGGAGCGGCTGCTGGGCTGAA
AGCGGCAGGTGGCGCAGGGGGTGCTATGGCGGCAGGAGGTGGAAGTTCTT
CATCGTGGAGTTCAAGCTACGGTTCAAAGACAGGAGGATATGGACGAACC
ATTGATGAGGATGAAGACAAGAAAGAATCGATGAAGAAATTATCACTGAG
TGATGTTTGGTCACGAAAGATCGTCGCATTGAAAGCGAGAGGAAGCGAAG
CAAATTTTGTACCCAAAATTGTCACTAGCGGAGGAATCCCTGGCGAAACC
GTAAAGATTCGTAAACCAGCAATGACCAAGAAGTTTGTACATTTAATGGA
GGATCTGGCTGGTAAATTAGCTGTCAATAAACTGAACGTAGCagaagaat
ttgtgaaaaatttgaagaagaagaaagaagaggaagTTTATGAATCGATA
GGTGTTACCAGATCTCTTaaaagtaaatcgaaaatattttcagcaaaaaa
cgcagtcaaaaaacatttcattaaaaagttgaCAACgaataacaataaca
aacatcATAAGAGAGCCGTTAAAAAGTCCAAAGTCAACGTTGGAAATGCT
CTCTAGAAGTGATTTACTTCGATTTATAGGACAGtttttggtattgtttt
ttttcaattaggtattttttgtgacaatttcattcccttttttGGTAAAT
ATTGTATAATAAAGAATTAAACCAATaaaccaaatcaaaatttctatCTA
CCGTATCGGCCCTTTAGTCTGGCCGAAATACAATAAAACAGGGGTGAACG
TAGAAAATAATTCCGCG Coding sequence (CDS) from alignment at sc0000233_pilon:175045..180811+ >MSTRG.19835.8.p2 ID=MSTRG.19835.8.p2|Name=MSTRG.19835.8.p2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1140bp|location=Sequence derived from alignment at sc0000233_pilon:175045..180811+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGCAAGCATCAGGAGCTGCACAGACTGCTGGTGCTTTGGGTGCAGCTGG
AGCCGCTGAAAGTGCAGGGATAgcaggtggtgcagctggtatggctgcag
gtggaggaggtgctgcggcagcTGGtggtggtggtggtTCGATTGCAGGA
GGAGGAGCTATGGCTGCTGGCGGTGCAGCTGGTGGCTCGATGAAAATTGG
GGGAGGGATCACAGGAGGTGCAGCAGGAGCATTGAAAGCTTCAGGAACCG
CAGGTGGAGGAGGTAGTATGAAGATTGGAGGTGGTATGGCAGGTGCAGCT
GGAGGAAGTGCAGGAATATCAGGAGGTGCTGGAGGTTCACTTAAGATTGG
AGGTGGGATGGCAGGTGCAGCTGGAGGAAGTGCAGGAATATCAGGAGGCG
CTGGAGGTTCGCTGAAGATTGGAGGTGGGATGAAAGCGTCAGGAGCTATA
TCAGGTGGTATATCAGGTGGCGGCGGGTTAAGTGTTGGTGGTGGTGGTGC
CATGAAAATTGGAGGCGGCGGTGGGTTGAAGGTTGGTGGTGGAGGGGCAA
TGAAGATGGCCGGAGGAGCGGCTGCTGGGCTGAAAGCGGCAGGTGGCGCA
GGGGGTGCTATGGCGGCAGGAGGTGGAAGTTCTTCATCGTGGAGTTCAAG
CTACGGTTCAAAGACAGGAGGATATGGACGAACCATTGATGAGGATGAAG
ACAAGAAAGAATCGATGAAGAAATTATCACTGAGTGATGTTTGGTCACGA
AAGATCGTCGCATTGAAAGCGAGAGGAAGCGAAGCAAATTTTGTACCCAA
AATTGTCACTAGCGGAGGAATCCCTGGCGAAACCGTAAAGATTCGTAAAC
CAGCAATGACCAAGAAGTTTGTACATTTAATGGAGGATCTGGCTGGTAAA
TTAGCTGTCAATAAACTGAACGTAGCagaagaatttgtgaaaaatttgaa
gaagaagaaagaagaggaagTTTATGAATCGATAGGTGTTACCAGATCTC
TTaaaagtaaatcgaaaatattttcagcaaaaaacgcagtcaaaaaacat
ttcattaaaaagttgaCAACgaataacaataacaaacatcATAAGAGAGC
CGTTAAAAAGTCCAAAGTCAACGTTGGAAATGCTCTCTAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000233_pilon | genome | sc0000233_pilon:175045..180811 + |
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