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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000233_pilon:175020..180811+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.19835.1.p2 ID=MSTRG.19835.1.p2|Name=MSTRG.19835.1.p2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5792bp|location=Sequence derived from alignment at sc0000233_pilon:175020..180811+ (Clytia hemisphaerica_ch_hm2_pilon)
CAAATTAGTTACAGCTCGATAACCACAgttttatcttcgataattttgtt
cttttagttttcgtttttggaattttgttgGTTATATTATAGTCtataaa
aatagcaaaatttgaaTTACAAGTAACATgttgaaagttgacaaaaattG
ATTGTATGGTCGAAAAAGgacttttaaaatgaaatttaaaggttGGTATT
ACATGTGGCATGTTTCGATTATTAAGTGTTAATCTCTTATAACCCTGAAG
CTAACCCTCTCTCGGGAGAGATCTTAAGGAAGGAATCTTAAgaaattact
cttaggtgccaaataaacgccccccccccgcttgttaatctttcgaaaat
tttccaaccccgcccccggaccttattaggaccccccccccccccccccc
gttaccccgtttattaatttttagaaatattttcagctgtcaaagagaag
gccccttatatttctctaaatagcctgattttagcctatatttaccttat
tttttgggttttcagaagtacaatttccaaccccccccccccggcaatta
ggtccccccgtttattaaaatctcaaaaattttccccccgtttattcgaa
cctctCCCGTTTATTTGGTACCTAAGAGTAGGTCATTTAGAAGGCGGCAT
CCTTCATTAAGCCAAAAAGATCGGAACCGCACCATCACACAAAGAAAAAC
TCTGGTCATACAGCCCGCTTGGGACCCCTCTTTAGATTCGAATTTGATTA
AAGTAGTTCAATGCAGTGATctacaaccccttctcacagacccacttgaA
AAATCGACTCAAATATCGTCCCCAGAGCAAAGTTACACTCTCGTTacatt
tttgtccccattgaattttctggctcgaaaacaatggaattcaaatcccc
agcaaaaaaaacatgggaaagtacacgttttttttttattagaacaccta
aaatttggctgagcttgaatgtgcttattttttttagcaattttcagcct
aaaatgttcttaaatgcgttcttaatttttcagactactctaaatcgaca
atatgatacaaaataaagagcacttaaatttggcaaaatttggacaatat
tcgactctcgacttttgaagatccacccctaaattcggttaaaactgctt
aaaaagagggaaaaattgtagtttctcgtcatttttttccaaactgaggc
tgggcatgttcttaagatgttcttaatttttcgacgaatttcagcctata
tgttcttataagctaggttctaaaaaaaaaaacgtgtatccccatcaagt
tttggtccattatttttacccccactggctgaaaaaaatcctaccgagtc
tgtgagaaggggatgtattACTATATCAAATTGTAACTTCAGTTTGTTGC
TTGTTAGTGTGTCTATGTTAGCTAATGCTTGAGCTTTCCGGGATGGGTTC
GATTGAAGACCTCAGTCTGATGCCCTGTTGATTAGTGCTCATCAatcaaa
aagaaagataaagGGTAAATCGAGTAAATCACTCGCCTAGACGAGAATCA
GTGTATTAATTTGTCTTTTCATATTGCTTTACTTTCAGCTATCGCATTGA
TAGTGTTTGTAGCCATTCAGCAATGTATTGGTGTGAAGAATCATCAAACT
TTCTTCGGGATATACGGAAAGTTTATCCCAGCCAATAACCAGGGTAGTGT
TAAAGGTTCACAAAGAAACATTTTACCACGTGTCAATGGCGAAGAGGGAG
GGGACGTTAAACTGACCCTCGGCCCCGCCATAAAGCCCATCAAAACTCGC
GATGGACCATTCCAACCGAGTCAACAAGTCAGTGAGATCATTGGCCAAGT
GATGCATTTCGACGAAAATATGTTAAACGGGCGTGGTCCATCTGTTGCTC
GACATCACCCAGCACCCTCCGCCCATCGAGAGGCGGAAGAAGATGAAGAG
GAACAAACACCGCCCAATGATGAATTGGCGTCTGAACACGGACCAACTTC
ACAGGAAGAAACAATAGAAAACGACGATTACAACAACGTGGAGAAAGAAG
AGTACATCGCGAAAGGGCGTGAAGAAAGCATGCATTTCTCAAAATTGTTA
GACCAATTAGAAGATGATCCTGGACTTGGTAATTCACAGACCGGAAACTT
AAAACCGACGCATAAGCTTGAACAAGGTCGTCTGTACAATGGCTTCAAAG
CAACGCCTAAATTAAAGCATCCTTTGATTCACCGTAAGAAAGGATGTACG
GGGAAGAGATGTGATATAGCAGGGGGATTTTTTGGCGCAACTGATGGACa
tttcgaaccaccaaatgaaGATGAAGTACCTTATGATGTAGGAGGTAATA
GAACCATTATAATTTCGCATTGATTCAATAATCAATTAAATACGGTACAA
ACATAGGCCTTGTATGTTCCTCATACATTTCTTACAAAACCTTATTACAA
CAAATCTGCAGACATGGTGTAAGTACTGTGAAACGATATTGAAATAATTT
CACTGTAAAATTCTTTGCGTGTTTAAAACTTAAATACATGTTTTCTTTAC
GAATCTTTTGATTAAAACCACACCATTTCTTTTATTGCAGACACTCCAAT
CATTGGCGATGCAGAAGGTCCGGTCCAAGATGAAGCTATGATGGCTGATA
CTTTATTTCACCTTCACAAAGTGTATGACAAAGAGAAACAGGCCTTAGAA
TTGCTGGGCCACCATAATGGACATCACTTTCACCACGGATGTAAGTTTGG
ACATTTAAAGATAACCATCATCATGGCTCGACCAACAAGGCTTCTCAAAA
CATGAATGAAGTGTTCTAAAAATTATTATGTTCTTCTTTGTAAAGCAGCT
AAATTGAGTCTGGTAGAATTAAATCATATTGTCAAAGGACAgttcctttt
taatttttagtggAAATTAAAAGGTTAAGCGATAACGTTAGTTCTCCTTT
AACGAATTCATTATTCCATTCTTCTCATTAGTTGGAGGTCATTACTACCA
TGAATTTCCACACCACGATGTCCATGACGCGCATGACGAACATCATCACA
CTCAAATGATCCCCATCGGTATCGAACTACCTAATCACTTGCATTCTCCA
CAGAACTTTCGTCACCATGGTGGTGCTACCACTGTGGCTGGAGGTGCCGC
TGGTGGAACTGTAGCAGGCGGTGCTGCTGGTGGGACAGTAGGAGGTGGAG
CAGCTGGAGGAGTTGCCGGTGGAGGTGCACCCGGAGGAGTTGCTGGTGGA
GCCGCTGGAGGAGTTGAAGGTGGCGCTGCTGGCGGAGCCGCTGGAGGAGT
TGAAGGGGCCGCTGGAGGTGCAGCCggaggagtcgctggtggagccgctg
gaggagcagctggaggagttgaaggtggagctgctggaggagTTGAAGGT
GGAGCTGCCGGAGGAGTTGAAGGtggaGCTgctggcggaagtggagctgg
aggaagccgctggtggagctggagctgctggcggagTTGAAGgtggcgct
gctggcggagtgctggagctgctgggaggaggctggaggagtctggtgag
gtggaggcggatgctggaggagttgaaggtggagCCGCTGGCGGAGTTGA
AGGTGGAGCTGCTGGAGGTATCGAAGGTGGAGCTGCTGGAGGTATTGAAG
GTGGAGCTGCTGGAGGTATCGAAGGTGGTGCTGCTGGGGGTACTGCTGGA
GGGGCTGCCGGGGGAGCTACAGGTGGAATAGCTGGAGGTGCAGAAGGAGG
GGCTGCGGTGGAGGTGGCGCAGGAAGTGAAGCTGCAGCTGCTATTGGAGG
AGAAGCTGGAGCGGCTGCAGCTGGAGGAGCAGAGGCTGGCGGAGCAGCAG
GCGGATCTGTAGGAGCTGAAGAGGGAGCAAAAGAAGGGGCTTCTGAAGGT
GCAGCGACTGGTGCAGCTGAAGGGCGGCAGCAGGAGCAGCTGGCGGTGCA
AGTACTGGGGCTGCAGAGGGGGCTGTGGAAAAAGTGGCAGAGGCTGTTGC
AAGTGGAGATGGTGATGATCCAGAAAAATTAGTGTCTGCAGCAAAAGAAG
GCGCTTCAAAAGGAGCCGCAGAGGGTGTTGCTACCGGGATATCAGAAGGT
GCGAAACTCGGCGCAGAAGCAGGAGCTGCTGCTGGTGGTTCACAAGGAGG
AGCTGCAGGTGCAGCTGAAGGATCTATCCAAGGAAATGCAGCAGGAGTAA
CTGGGGCGATGTCGGGAGGAGCAGAAGGAGGTGCAGCAGTCGGGGAGCAG
CTGGAGGTGAAGCAGGTGGCCAGGCTGGTGGAGCGATCGGTGCTTCTGCG
GGAGGCGCCGCTGGTGCTGCGGTGGGTGCGGCAGCAGGAGAAGCAGCCGG
TGGTGCAGTTGTTTCAGCTGGAAAGTTATCTGGAAAAGTAGAAGGCTCCG
CAGCAAAGGGAGCAGCTAAGCTAGCAGGTGCAGCTGGTGCTATGCAAGCA
TCAGGAGCTGCACAGACTGCTGGTGCTTTGGGTGCAGCTGGAGCCGCTGA
AAGTGCAGGGATAgcaggtggtgcagctggtatggctgcaggtggaggag
gtgctgcggcagcTGGtggtggtggtggtTCGATTGCAGGAGGAGGAGCT
ATGGCTGCTGGCGGTGCAGCTGGTGGCTCGATGAAAATTGGGGGAGGGAT
CACAGGAGGTGCAGCAGGAGCATTGAAAGCTTCAGGAACCGCAGGTGGAG
GAGGTAGTATGAAGATTGGAGGTGGTATGGCAGGTGCAGCTGGAGGAAGT
GCAGGAATATCAGGAGGTGCTGGAGGTTCACTTAAGATTGGAGGTGGGAT
GGCAGGTGCAGCTGGAGGAAGTGCAGGAATATCAGGAGGCGCTGGAGGTT
CGCTGAAGATTGGAGGTGGGATGAAAGCGTCAGGAGCTATATCAGGTGGT
ATATCAGGTGGCGGCGGGTTAAGTGTTGGTGGTGGTGGTGCCATGAAAAT
TGGAGGCGGCGGTGGGTTGAAGGTTGGTGGTGGAGGGGCAATGAAGATGG
CCGGAGGAGCGGCTGCTGGGCTGAAAGCGGCAGGTGGCGCAGGGGGTGCT
ATGGCGGCAGGAGGTGGAAGTTCTTCATCGTGGAGTTCAAGCTACGGTTC
AAAGACAGGAGGATATGGACGAACCATTGATGAGGATGAAGACAAGAAAG
AATCGATGAAGAAATTATCACTGAGTGATGTTTGGTCACGAAAGATCGTC
GCATTGAAAGCGAGAGGAAGCGAAGCAAATTTTGTACCCAAAATTGTCAC
TAGCGGAGGAATCCCTGGCGAAACCGTAAAGATTCGTAAACCAGCAATGA
CCAAGAAGTTTGTACATTTAATGGAGGATCTGGCTGGTAAATTAGCTGTC
AATAAACTGAACGTAGCagaagaatttgtgaaaaatttgaagaagaagaa
agaagaggaagTTTATGAATCGATAGGTGTTACCAGATCTCTTaaaagta
aatcgaaaatattttcagcaaaaaacgcagtcaaaaaacatttcattaaa
aagttgaCAACgaataacaataacaaacatcATAAGAGAGCCGTTAAAAA
GTCCAAAGTCAACGTTGGAAATGCTCTCTAGAAGTGATTTACTTCGATTT
ATAGGACAGtttttggtattgttttttttcaattaggtattttttgtgac
aatttcattcccttttttGGTAAATATTGTATAATAAAGAATTAAACCAA
TaaaccaaatcaaaatttctatCTACCGTATCGGCCCTTTAGTCTGGCCG
AAATACAATAAAACAGGGGTGAACGTAGAAAATAATTCCGCG Coding sequence (CDS) from alignment at sc0000233_pilon:175020..180811+ >MSTRG.19835.1.p2 ID=MSTRG.19835.1.p2|Name=MSTRG.19835.1.p2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1140bp|location=Sequence derived from alignment at sc0000233_pilon:175020..180811+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGCAAGCATCAGGAGCTGCACAGACTGCTGGTGCTTTGGGTGCAGCTGG
AGCCGCTGAAAGTGCAGGGATAgcaggtggtgcagctggtatggctgcag
gtggaggaggtgctgcggcagcTGGtggtggtggtggtTCGATTGCAGGA
GGAGGAGCTATGGCTGCTGGCGGTGCAGCTGGTGGCTCGATGAAAATTGG
GGGAGGGATCACAGGAGGTGCAGCAGGAGCATTGAAAGCTTCAGGAACCG
CAGGTGGAGGAGGTAGTATGAAGATTGGAGGTGGTATGGCAGGTGCAGCT
GGAGGAAGTGCAGGAATATCAGGAGGTGCTGGAGGTTCACTTAAGATTGG
AGGTGGGATGGCAGGTGCAGCTGGAGGAAGTGCAGGAATATCAGGAGGCG
CTGGAGGTTCGCTGAAGATTGGAGGTGGGATGAAAGCGTCAGGAGCTATA
TCAGGTGGTATATCAGGTGGCGGCGGGTTAAGTGTTGGTGGTGGTGGTGC
CATGAAAATTGGAGGCGGCGGTGGGTTGAAGGTTGGTGGTGGAGGGGCAA
TGAAGATGGCCGGAGGAGCGGCTGCTGGGCTGAAAGCGGCAGGTGGCGCA
GGGGGTGCTATGGCGGCAGGAGGTGGAAGTTCTTCATCGTGGAGTTCAAG
CTACGGTTCAAAGACAGGAGGATATGGACGAACCATTGATGAGGATGAAG
ACAAGAAAGAATCGATGAAGAAATTATCACTGAGTGATGTTTGGTCACGA
AAGATCGTCGCATTGAAAGCGAGAGGAAGCGAAGCAAATTTTGTACCCAA
AATTGTCACTAGCGGAGGAATCCCTGGCGAAACCGTAAAGATTCGTAAAC
CAGCAATGACCAAGAAGTTTGTACATTTAATGGAGGATCTGGCTGGTAAA
TTAGCTGTCAATAAACTGAACGTAGCagaagaatttgtgaaaaatttgaa
gaagaagaaagaagaggaagTTTATGAATCGATAGGTGTTACCAGATCTC
TTaaaagtaaatcgaaaatattttcagcaaaaaacgcagtcaaaaaacat
ttcattaaaaagttgaCAACgaataacaataacaaacatcATAAGAGAGC
CGTTAAAAAGTCCAAAGTCAACGTTGGAAATGCTCTCTAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000233_pilon | genome | sc0000233_pilon:175020..180811 + |
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