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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000233_pilon:143710..148104+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.19831.1.p1 ID=MSTRG.19831.1.p1|Name=MSTRG.19831.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4395bp|location=Sequence derived from alignment at sc0000233_pilon:143710..148104+ (Clytia hemisphaerica_ch_hm2_pilon)
ttttacagtaaaaataaataaataaataatccAAGATGGCGTCGTCGAGT
AAGCAAGCAAAGAAAGAGGAGGAGAAAAAAGTGGGCGGTGATCATTTCAG
AAGGACTTGGGATgctgatgaatttgaaaagaaagctAAAGGTAATGATT
TCATTTCCATATCAtaactagactggagtcgtttataatgcgtgtaatac
agtagtataggcgttatatgacaataagattattgttacgggattttttt
gtataaacgactaaaattgttccaacCATTAGTTTTTGCTAGTCGTCTAG
CTTACTAGTCTATATCATAACTGAATGATTTTGTATCGAGTCAAACATGA
CCCATGAGCATTATTTCGATGCAACATCTGTCCTCACTTTGCTAGAGGTT
CAATTTACCCCATCATGAGTTTAATTACTGTAATAAGTCATTCTTTAAAT
CTACCATCTTTTATTTTGTAGAACGTTTACAAGAAGATTTAGATTTTCTT
GACGGCAAAGCGTCCTCATCCAGTAGTGATCCACCAGTTCAACGTGAGAA
GCTGAAAGCAAGAGATTACGCTGTAGACTTACAATCAAGATTGGGAAAAT
CACAAGTCATCACTAAAACTACTGCACTGGCCGATCAAGGTATAGATGCt
caatttctttaaaatgaaCGttttttttCCATATCCGTTCGGCTGTTCGT
CTATACCGTAAGGTTCAAACCTGAAACATTAAATTTCACCATCATTCCTT
CTCTGCGATAAATTGTAGGATcgacttttaatttttcaccaTCGATTTTT
ATACATATCTAATAGTGATGAAATTCTAGAAAGTAAATGCATTGCTCTGT
AACCGTAGATTCTTTAGTATGGAACTTGGGAAAATCATCCATTGATACAA
TTTTATATTCGTTACTGTCTATTTCTTCTTCACAGGTGGTTATTATTGCA
ATGTGTGTGATTGCGTGGTGAAAGATTCCATTAACTTCTTGGATCACATC
AATGGAAAGAAGCATCAGCGAAACATGGGAATGTCTATGAAAGTTGAAAG
ATCATCTCTTGACCAAGTCAAAGCTAGGTTTGCCATGAATAAGAAGAAGA
AGGAAGATAACGAGAAAAAGAAAGATTATGACTTCGATTCAAGAATTAAA
GAACTAGAAGATGAGgtttgtctgtctgtctgtctgtctgtctgtctgtc
tgtctgtctgtctgtctgtctgtctaaCTATATGTTTGACTGTTGATACT
CTAAACCTGAGTGTATCGCACATTTATCGAAGCGTAGCACAGgcgatgaa
atttgaaatatccGTAGACATGGGTCAGTTTCCAGACCTCTAGTTGATTA
TATGCATGGCGTTGTTCTGTTGGTCCACCTGTTTAGTTGACTGCGTTCAA
CAGATATCCTTGACGAGTAACAATGTCTGTAAAATAGCGTAGAATATTTG
GGGAGACTGATTTTtagtaccttaagagaagaaattttggcgaatcagCT
CATTCGtcaattttggtgcaatttggcgagaattaattttggcgaacgac
ccatattttagaagaagaaaaagaggaaagaagggtttttaggagaaata
gaggactaaattgaaagaaaattaaatttggccagaatttatttttgcga
atgacctataaatctaaatttggcggaaagaaatgttggtgaatttggca
aaatttttaggcaatttgccaaattcgccaaaatttttgtcctccaaaat
ttctttccttaagggctctgaccatagtgaatttttgatatttgccactt
acaaaatgtaaagttctacttgatatagctcacaaaactgtggcatgtta
tacattttctgttaggccaattatccttgagtctgaaaatttatgaatcg
caatgaaaaaatttgatgaaggagaaaatgaagacttttacaaagaagag
tattttaactttgaagagcttagtttcggcgcaaaaaaaacattttgaaa
aaaaatttgcggtagatggtgtatcttttatcaaactaaaattatttttt
tggaaatttttctaaaagcttatttgtaaatatgtattttccaaaaatca
aaatgttaaaaacataactaaaagtttcatgcacttacgtacaatcatca
gatgtgACTAAAAACAgtgttgaaaagaaatttatgtacaagaaaaaaat
tctgattcattaaaaagtgattaaaacatgtgatTTCTACGTGTCGTCAT
GCGGCAAAGTATTTATTAAAAAACTTCAAAGAGGTCCCACCAGACCCTTG
AGAATTTTACAGTTTTACTACCTTTGTCTTTTTTATCTTTTAACGATCTT
TTAATAATTACCCATCACATGttttaatcactttttaatgaatcagaatt
tttttcttgtacataaatttcttttcaacacTGTTTTTAGTcacatctga
tgattgtacgtaagtgcatgaaacttttagttatgtttttaacattttga
tttttggaaaatacatatttatGAAGCACTACAACTGTATTGTGCACTCT
TTGGATGTTTGCTACGCATTATTCattaaaagcttatttgtctcaaaatc
ttgaaaatagtgcttgaccaaaattttccatcccaattcttcatagaaaa
acagtcataacttttgatgcattaatgtagaaaaattttccaacaaaatt
aaaacaattcaATTCTTTGTGGACAGTTTAAAagacttcaaaacaaaaag
gttaattacccattaaaacttggcactttttttataaaagaaggtgatgc
aacatattattaacgtctttttaaagttcataacgtcatttttgcaatta
aattcttaattactcttataTTAagagatttgattaaaaagcaatttata
agggcaattctttgttaaagtgTTAAGAACctaaataacttttatgttca
aatactaaaatcaaatttccgACTATGAtcaccagagcccttaaggtaaT
TGGTTTTTCCTTTATTATTGttaattcaatttttctattttgcagGATGA
CCGAGTACGCCAACGTAGGCGTGATTCGAAATCAGAACGTAAACGCAAGC
AACAAGAAGCTTTACAAGAATACCAAGATGATGACGTGGCTGCAATGATG
GGTTTTGGAGGATTTGGCGGCTCAAAATAAATATAACACGCTATACTCAT
CAAAATTCATTTCTCGACTTGTCAAGGTTAGTGGCATTTTCAATGCTGTG
GTATCACTATGGTCAACGTTAAGTAAAGATATCAACATTGTGATAATGGG
ATTGCTCCCGAAACTTTCTTTGAGAGAAAGCGAGGGAAAAGTTAGGGTGC
TGGAAAATCGCAATTCCACGCGGGGAACAAACACCGAAAGTTTGAATTAT
TTAGTAGCTGGAATCAGATTAAACATTTAGCTTGAGACATTTCCAGAAGT
ACTACGCTAATGGTGATGGCTATTGAAACGTGTAGGGATGGACGCTCAGG
AAAACTACCTTAAataggaactaattttgacgagggccaaaaatttcagg
aaagttTAATCTTGGCGAGAACTAATGTTTTCGCGTAGCAGGGTAAATCA
GTTCCATTTTCCGTTTTGACAAAGAATTGGGacgattttggaaaattaca
aacgaaaattaattttggcgaggtAGCAATTATGCCAAATTCGCGTTACC
CTCTTTTGAAAAGATACGAAATAATCGAAGGTAAGAAttaattttcgtca
aaattagttccttgGAAAATGTAAAATGAAGAACACTAGTAATATTATTT
GAAATGGAACCGCTGTGTCAAAAGATAAAAACTGtggttttttcaatttt
gatttatttttttatcatgaATTCCAAAAGATACAGTAATAGATGACAAG
AAAAAGGCGATGAAATTTATGTTAGGAAAAATCCTCACAAAATATTTGCC
AATCGATACTAGGACTATTTAGACCTTTGGAAACATAAcctcaaaatttt
gaggaaCGGTGGTgcgatttaaaaataaaaaagtcttgttCGTATGTAGA
GATCGGCACACTCAAGATAATGTATACGTGTATATGTgtgaaatgtaaaa
aataaaagccCAATGATCTTTCCGTTCTCCTATATTTAACGTCCAAGGTG
TAAAAGTTACTGTATAAAAGTTCAAGCGTTATTGAGTGCTTCTTCCATAT
TACGTGGTTTGAATACACACTTATAATCCTCAGGGATACGACTCACACCG
GTGTGTCCTTCCAAAGAAGGCAAATTCTCCTCGTCAGATggcaaaatttc
gaaattgtAAACAACACTTGAAAATATGATGAACAACTCCATTTTAGCCA
ACACATCTCCTGGGCATGATCGACGTCCCATAGAGAACGGGTAGA Coding sequence (CDS) from alignment at sc0000233_pilon:143710..148104+ >MSTRG.19831.1.p1 ID=MSTRG.19831.1.p1|Name=MSTRG.19831.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2556bp|location=Sequence derived from alignment at sc0000233_pilon:143710..148104+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCGTCGTCGAGTAAGCAAGCAAAGAAAGAGGAGGAGAAAAAAGTGGG
CGGTGATCATTTCAGAAGGACTTGGGATgctgatgaatttgaaaagaaag
ctAAAGAACGTTTACAAGAAGATTTAGATTTTCTTGACGGCAAAGCGTCC
TCATCCAGTAGTGATCCACCAGTTCAACGTGAGAAGCTGAAAGCAAGAGA
TTACGCTGTAGACTTACAATCAAGATTGGGAAAATCACAAGTCATCACTA
AAACTACTGCACTGGCCGATCAAGGTGGTTATTATTGCAATGTGTGTGAT
TGCGTGGTGAAAGATTCCATTAACTTCTTGGATCACATCAATGGAAAGAA
GCATCAGCGAAACATGGGAATGTCTATGAAAGTTGAAAGATCATCTCTTG
ACCAAGTCAAAGCTAGGTTTGCCATGAATAAGAAGAAGAAGGAAGATAAC
GAGAAAAAGAAAGATTATGACTTCGATTCAAGAATTAAAGAACTAGAAGA
TGAGGATGACCGAGTACGCCAACGTAGGCGTGATTCGAAATCAGAACGTA
AACGCAAGCAACAAGAAGCTTTACAAGAATACCAAGATGATGACGTGGCT
GCAATGATGGGTTTTGGAGGATTTGGCGGCTCAAAATAAATGGCGTCGTC
GAGTAAGCAAGCAAAGAAAGAGGAGGAGAAAAAAGTGGGCGGTGATCATT
TCAGAAGGACTTGGGATgctgatgaatttgaaaagaaagctAAAGAACGT
TTACAAGAAGATTTAGATTTTCTTGACGGCAAAGCGTCCTCATCCAGTAG
TGATCCACCAGTTCAACGTGAGAAGCTGAAAGCAAGAGATTACGCTGTAG
ACTTACAATCAAGATTGGGAAAATCACAAGTCATCACTAAAACTACTGCA
CTGGCCGATCAAGGTGGTTATTATTGCAATGTGTGTGATTGCGTGGTGAA
AGATTCCATTAACTTCTTGGATCACATCAATGGAAAGAAGCATCAGCGAA
ACATGGGAATGTCTATGAAAGTTGAAAGATCATCTCTTGACCAAGTCAAA
GCTAGGTTTGCCATGAATAAGAAGAAGAAGGAAGATAACGAGAAAAAGAA
AGATTATGACTTCGATTCAAGAATTAAAGAACTAGAAGATGAGGATGACC
GAGTACGCCAACGTAGGCGTGATTCGAAATCAGAACGTAAACGCAAGCAA
CAAGAAGCTTTACAAGAATACCAAGATGATGACGTGGCTGCAATGATGGG
TTTTGGAGGATTTGGCGGCTCAAAATAAATGGCGTCGTCGAGTAAGCAAG
CAAAGAAAGAGGAGGAGAAAAAAGTGGGCGGTGATCATTTCAGAAGGACT
TGGGATgctgatgaatttgaaaagaaagctAAAGAACGTTTACAAGAAGA
TTTAGATTTTCTTGACGGCAAAGCGTCCTCATCCAGTAGTGATCCACCAG
TTCAACGTGAGAAGCTGAAAGCAAGAGATTACGCTGTAGACTTACAATCA
AGATTGGGAAAATCACAAGTCATCACTAAAACTACTGCACTGGCCGATCA
AGGTGGTTATTATTGCAATGTGTGTGATTGCGTGGTGAAAGATTCCATTA
ACTTCTTGGATCACATCAATGGAAAGAAGCATCAGCGAAACATGGGAATG
TCTATGAAAGTTGAAAGATCATCTCTTGACCAAGTCAAAGCTAGGTTTGC
CATGAATAAGAAGAAGAAGGAAGATAACGAGAAAAAGAAAGATTATGACT
TCGATTCAAGAATTAAAGAACTAGAAGATGAGGATGACCGAGTACGCCAA
CGTAGGCGTGATTCGAAATCAGAACGTAAACGCAAGCAACAAGAAGCTTT
ACAAGAATACCAAGATGATGACGTGGCTGCAATGATGGGTTTTGGAGGAT
TTGGCGGCTCAAAATAAATGGCGTCGTCGAGTAAGCAAGCAAAGAAAGAG
GAGGAGAAAAAAGTGGGCGGTGATCATTTCAGAAGGACTTGGGATgctga
tgaatttgaaaagaaagctAAAGAACGTTTACAAGAAGATTTAGATTTTC
TTGACGGCAAAGCGTCCTCATCCAGTAGTGATCCACCAGTTCAACGTGAG
AAGCTGAAAGCAAGAGATTACGCTGTAGACTTACAATCAAGATTGGGAAA
ATCACAAGTCATCACTAAAACTACTGCACTGGCCGATCAAGGTGGTTATT
ATTGCAATGTGTGTGATTGCGTGGTGAAAGATTCCATTAACTTCTTGGAT
CACATCAATGGAAAGAAGCATCAGCGAAACATGGGAATGTCTATGAAAGT
TGAAAGATCATCTCTTGACCAAGTCAAAGCTAGGTTTGCCATGAATAAGA
AGAAGAAGGAAGATAACGAGAAAAAGAAAGATTATGACTTCGATTCAAGA
ATTAAAGAACTAGAAGATGAGGATGACCGAGTACGCCAACGTAGGCGTGA
TTCGAAATCAGAACGTAAACGCAAGCAACAAGAAGCTTTACAAGAATACC
AAGATGATGACGTGGCTGCAATGATGGGTTTTGGAGGATTTGGCGGCTCA
AAATAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| sc0000233_pilon | genome | sc0000233_pilon:143710..148104 + |
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