|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000229_pilon:472335..480917+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.19713.2.p3 ID=MSTRG.19713.2.p3|Name=MSTRG.19713.2.p3|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=8583bp|location=Sequence derived from alignment at sc0000229_pilon:472335..480917+ (Clytia hemisphaerica_ch_hm2_pilon)
gtttgtttgaagTCTAAATTGATGAATATAATATagattgttattgtttt
aaaggtatgcaattttcaagaaaaagaaatgcatcaaaaattaaatcaaa
atggattggatgtgggaaaacaaagaccaaatTGACAGGTCCACCAGAAC
GTTCCTCCCACCAAAAGCCTAATGATACTTCTAAATTGCCACCTGATGTT
ATTAATACTGATGAAGAAATTGAAGTTGGAAATTTCCACAATTTTGACGA
GGAATTGATCATACCTAAGACTAAGAGGCAGTGTTATGGTGTGagcaaag
aaaaagaatttaaatgttGGGAGAAGCATAACATTGACTATTGCTCCCTT
TATTCAATGAAGTTTGACACTCTCCCAACATATTGCTGCTTTTGCAATGG
AGAATTCAGTTCAAGCTTTATATGGTGTAAATCATGTGGACCTCTCTCGT
TTTATTGTCACGATTGTGCAAATAAAGTTCACCAGAACACTCTATTTCAT
TCCTTGGTCGAGGTGAAGGTAACAGcactctttttatttttgttgatttc
tgaACTAATTATTCTATTTTACTAAGCTTTTTATACAGGGAAGTAAAGCT
TTTGTCTCAATTATCCATTTTTCTATTCACTTCAAATACAGAAAGTTTAT
ACATGCTCATTTTACTTTCTAGGTTGATGGAAGTATTGAGTCATTTCAGG
TCAAGTCCATTTTGCAAAGCGAGCATACACGAAAGTGCTTATCAGCTTAT
TCAAGAATATTGACTGTCATCTCAGAAACAGGTTTATAGATTTTTATGAG
CATGCCTTTTCATTAGGGGATGCCAACATTTTGGATTTGCCTTACATATT
GTGTTGTGTTGTCTTACTTACTAATTGTGGAATAAAATGCTATGTGGGTg
gttttcatgaaattttttaaagggGGGTTACTATTAAAATGATGGGGGTC
AAAGTTTCCATTTTGAACGTATGGCTACAACGGGTAACTGAaataattaa
attgattttttgaaattattgttaaTATATATATTGTTAAATAAACTGAA
GCATGACATTTATTGAACGTTTGCTTTACTACTGGTCTGGTCTAAATTGG
CATTCAGAGTCTTAAAATTGGGgttaagcacagaagagtagaTAAAAAGC
CAAAAGACTTCATTGTGTGAATATGTTGATTGTtagatttgttatttttt
gtccTAATAGTCACTCATGGGAAGATTGAGcttattaaaaaagtaaaaaa
gtttccaaaaagtggtttgtcttttcaaaattcaaattttagggCTTTAT
ACTTTCTGAAGCTTGAAGTTATCTCCAAAACaatttgttttttctcttta
atGTTTCAGAAAACTGTCCATATTTTATGCATATTTTATCATAATATTGT
ACTCTAGGTTCCAGTTACCAATGTGTTATATATTTTTGCAAATGTCAAGA
AGAGTTCAATACATTGATACACCTTGATTTATGGCCAGTGACACCCTTGA
AGCCAAACACagttttatcaataaatttgcTGCATCTGTTTGTATCATTG
CAATTAGAAGGGAAAATATCTTTTACATCTTTTTGTGATGGCCTATCATG
GAAAAGTGGTGTGGTAGACTCTGATCTGGtaaattctttttcatatttgt
tttagaaaaaaagccctcttttttacatttcttggtgaaaatattttaaa
ctaaAGCTTGTATGCATTTGTGATTGGCACAAAAATGGAAAAGGGTGTAG
ACTCTCTTCTAGACAGTTAAAACAAATTAACATACCACATACAATTGACT
TTTTCAGAGGAGGCACCTAAACCGCATGTCGCAAACTGATTCATTGGACC
AATTTAGACATTTCCGTCGGCAACTAACCAGTCTGAAAACAATATGTGGA
AATTATGATGGCTTAGGAAAGTGTGCATCCTGTCCAAAGGTAATAAGTCA
ATAATAGGTTTCAGACTTAGCAAAGAACAAAACTAATCCGTAGATGGTAT
TTTaatttatatatacttttaatTGGCTTAGAAGTGATGCAGTGTGAAAA
TTCAGGTTCAAGCTAATTgcaatgtttttgttatttttaggaTAATGGTT
GTGTCTTTTATTGCCTTGATGCCAATTTTGGCCTTGTGCTTAAAGCTTct
gcatcaaaatcaaaacgaCTTGCCATTCGGTCTGAAAACTTGTTCATTTT
GGATCAAGATGTCAAAGCATTTATGGAAAGTTATGATGACTCGTTGAAAA
CAAAGGTATATAGATTGACacaaattataataaaaataagataaatgaac
agaatttctcaaaatagtTTTACTGATTAAAATCTTATTACAGGATGCCA
AATTTTCACAACAACATACTGTGAACCCCTCCTTTACAAAGGTAGGGGTA
GAGCCTccaaaaaatcggggaaaataatatagggaatagggaaaaaatct
tataaaaggaggggTAGATTTTCAAAAGGAGGacaaagaattttgaattt
ttagaggGAAATTTGTAACAATAGACAGCAGCTTAAAACATGAATTGTAT
ACCCTGGAGTATATaatatttaatttaatttaatgcGTCTGCAGATGTCa
taatcattctttttaaatctTAGGATTGTAGTAACTTTCAAGCTGGAAAC
AACTTAAGATCCAAGCGGAAGACAAAGAAGCTCAGTGTCACAGGAATATT
TGGAATGTCATGCCGGCACGAATtcccaaaactttttttgaacatGCAAC
ATGGTGAAAGGTAATATCTATTTACAACAGCCTGACAAACAGTGGTtagt
taaaatctttgaaatataattttcctGAAAGTACATGATATTAGATACAT
TACTTTTCCGTCAGATTCTTTCCCAATTTCTGCCATACCATCTAAAACGG
AAACCAAGATTCTCTTACCAGAAATTTCGTTGAAATGCATTGTTTTTGTC
gaagatttcagaaattttgatacTATGCAAATTCCCGAATTCCGACTTGC
GCACCTTCTGCCATCTAGCTCCTTCGTCAATTGTGAAACCCCCTTCAAAT
AGGGTTGTTGTACGTTGttatattgagaaaaaaattgcacttttgTGTTT
TCAGACTTGGCTATGCTGTACTTTTACTTGAACGCATACTGAAGGAAACC
GAAAACAAGAACTTAAACATTCACATTATATATGACATTGCTTGCGTTTT
GAAGTCCCATTTGCAGGTTTTACTTTACATAATATTATTAGAGTAGTATG
CTGCTGTACTACAGCTAAAATATCCCATCAAAGCCATTCagttctttttt
taaaatgttgataaaaaagGAGAACCTTCAAGAGGCATTGATACTGTGTA
CTGAAATgacactaaagtctgtctcgaaataatttgcagctggagaaaaa
aatggctgtaacttttgatagaattcgaatcaagttgcgattttgtgctc
gttaaaaagatattcgtgagtgggaTATTATCAAgtagaaaaattgagaa
aaaaaaggaaaatgaaaatgaaaaatgaagaagaaaaaaatcaacttttt
gtagaaatgtggtatatttaccattttcacaggagtgactcttcaatctt
agatcatcatcaatgtgaaaaaattttataaaagtattcattcaatcaaa
aaatatcaaacaaagtttattactggttgatcgacaaaaggctgtttttt
tgtcgttttttaccagtttttactattttatagagtcaaccagcaataaa
ctttctttgatatcttttgattgaatgaatatttttgaatttttttttga
cagtgatgatgatctatgattgaagaatcactcctgtgaaaatggtaatt
ataccacatttctacaaaaagttgatttttttcttcttcatttttcattt
tccttttccttttttttctcaatttttttacttgataatattccactcac
gaatatcatTTTAACAAGCActtaatcgcaacttgattcgaactctatca
aaagttacagccatttttgtctccagctgcattATTCCATCTccattatt
tcgagacagactttacactactttttttatttactatatttttagaaaaa
gaaaacatttaacAAGTATCAACACTTCAAGTTTGGTATCCCAGTTTTCC
ATTCTTATGGTCATAAAGGAGACTGCCAGGTTATTAATATGCTAATGAtt
ttatatgatttcaaacagtttagttttttcagtttggcctttttcaattt
actttggactttGTCACAAGTGGACTCTCACccatttctttcaaatcttt
gctttttgaaagaaatatccCACGTTTTTACAGATACCTCAAGCTTTTTA
TAAAGCTTATAAAAATAAGGTTCTTTGAGAAAGGAGAAGTCTGTATGAAT
ACATTATGTAAAACACTTTACTTTgagactttttaaaaatatatccCAGC
ATCTAGAATGACAGATGGGCTTTCTTGAAGTGACTGAGAAAGAGCTACAA
TGTGATTTAAAATCTACCAGTTCTTTTATTTACTCCATTAATCGATTATC
AGGTCATTGTTCCCAACTCATACGTTTCATATTCTTTTTCTTAATTATAA
GGTGAAAAATTCAATAAGGAGATTGGATACATTCGGACTGATGGATGGAG
AACTAATGGAGAGATTATGGTCTTACCTtcgatcattttcaaaaataaca
aaggaaatGACCCCTGCCCACCGCACAGATTTGCTAAGTGATGCACTGAT
GCATTTTGGCTCTaaaaaaaTGGGAAACATCGGTATTTGTTACTTTCTAA
AACCTTAGCTTCTgttattttgggttttcaatACGACATGATTTTTGGTG
TTGCCACCAAAGTTGTGTTATTTGAAAATCATcaacaaaaatgaaacatt
tccaTACCAAAGTATTGTACAGCCTTAACTTGTATTTTCAAACATGTTCA
AACATAATGATTTTAGCGGTACTCAAATAAAGCCACTATGGCTAAAATTC
CTGATAAAAGGCCTAAAATGTTAACACAAATAGGGGAAAAGTTATCCAAG
TATTCTATTTGTTCGATTTCTGTCTCTTTTCGTCTCAATTTTACGGAAGT
TTTCttctataatataaaaaatattgttaagGCTCATTTGTGGAGTAGTT
TAATAATCTAAGTACTTTACTGAAATCAATTCTATATCCTAAAATCTTTG
TAGCCCAGTTGTTATCGTGACCCGATTATCAATTTGAATCACCTACTTTT
TTACATAAAACTATGTTCTTTCAGGAAAATACCTTGTGTTTTTACATCAC
AAAGCAACCGAAACTGTAAATTCTTGCAACACAGAGATTGAATCGATATG
CTCAAAACTACCTGGTAAATAAATGTTTTGAATTAAAACGTTTGCTTCTT
CTATTAATCGTACTAGATCTTTGTAAAAACAGCTATAACTGCAATGTctt
tttggttatattatcgtaaagccttttattttttgcttatttctgattat
gacttttttCTGTGTTTCTAGTTGTTGTGAATGAGGAAATTATCAAAACG
TGGAAAATAGAGGAAGACAATATCGTAAGCAAGAACGGAAAAGCTCTAGA
AGCAGGTAactacactgttcctactatgtactactactactactactgct
actacAATCAATATTTGATGACACACACATCGCAGCTGATTAATTTCTAT
CTACATTAGGTTTTATCGCCACTGTCGAAAGGTCAACAGTATATGTAAGG
GAGTGAATAATAgggggggggTAATGTGGTTCTTCGAAAAATTATCaaca
gataaaaaatgttttgggtGTCTCATTAAAAAgagttttcaaagattttg
tatgTAATCTTTTTGTTCCTCTTCAGTTACAGGGACTATTTGACTAAACT
ATCAAGGAGACTTGACATGACGAATTAACAGCTcaaaaagacagtgacac
aaacaaagacaatgacaaaaacaaaaacaaagacaataacaaaaagcaaa
aacaaacacaacagacaaTGACGCCTCTGTAATTTAGCTTATGGAATTTT
CgtggaaatttgatttttgagggTTTGAGTATCGTCCGCGAATTAGGTCT
TAAAGGAAATCTGGGAAGACTGTTTTCCGCGAAGTAGAAAAATAAATCAG
CAATGTCAAGTAACTATCAAAATCTTTACTAGCATCCAATCCGTAATTTA
ATGACTAAAATTCGAAATCCGCGAAAGTCCTtgtgaaagtttatcccatt
taaAAGGTTGACTTAGTTTTATTAGTTCTGTTAGTTTCTGAAAAAACATG
TCGGACCTGGTTAATGAAAAAGGATGCACTGCACTGTGTTTCCATCATTC
TTACTTAAACGGAAACATGAAAACTACTCTTCAATTCTTATTCATTCAAT
TTCCGTTTTCTTCAGCACCTGCAGATTGGAAGCACTCCTATTACCTCAAA
CTTAAAGATTTCTACAAAGAGTCTGCTTTAGTTCTAATGAGCGAAAAAGT
ATGTGACGCTGCAATGCACCAACGTAAAGCTAAAAGGTAAATGGTTAAGA
CAAATCATAATAAAATgtattctttcattttatttatcattgaaaatttt
tttaatccttCAAAATCTTTCACATACTGTGGAACTGTATATTATAGAAG
CAAATTATGTCTTCTTTCTGACCCTGATgcttttaaagaaagtttttgac
cTCTAACGTAAAATGTTGCACTTCTACTTTTCAGACTCGAGCGAAGCTTA
ACATCGTTTGAAAAGGTTCATAAAATAGCTAAAAGATGGAAAACCACAGA
GAGCCAATTTCGCAATCAACATCTGTCTTTTTTGCAAGAAAAGTCGAACG
AAACAGCATCCACACTGTACAGCAGGTGCTCCGAAAGACTAATGTTGCTA
ACTCTAAAGAAACGATATGCAGGTAAGTGTTTTTAGTGACACCTATTAAC
ATTCTATTCAAAAATCTCGAGTTACCATAGAAAATTACAAATTAGGCGCG
TTGATACTTTAAACGTTGTAGTGTATGAGGAACTTTCAATTCAAATGATA
AAGTGAAGTGTGATGTGTCGATTTGGTTGTAATGAAGTGCAATAAAAATC
CGTTTTTCTACTTTTAGATGGTTCAGCTATAGCAACGAGGTTGAGCAAAC
AAATCAATAAAGTGTgcaaagaaataaagaatttaTTGGCTTCATACAAT
TCCATGCGATCAGAGATTTCGCCTAAATTCAAACCTGTTGATTATAAAGA
GGCTCTAGATGTCAAGTCTTCAATATATAACGAAATAAATCTTGTATCCA
ACTTGGATGAGGTAAGTGTAAAAGTGTGTAAaaaaggtcataagtagagG
AGCAAAAAGAGAAATCTATTAGTTTGAGCTAAGCCCgggggggCACTTAA
GGTAAATGActtaccagacgttcggcccttaagggtcggtttttcatagt
tcagttagtgcactgtaagggtaggaaattacaaaacttcacagaactgc
actgtaagggtaggaaattgtaataaaaggccaattttttggtaaaattg
gcaaaaaaattgggCAATTATGGAgtaaaattggtcaattttggaggaaa
atttccacattttcttggaaattgcaaaaatttcgcccttacgggcaaga
aactttgaaaaagtgcactgtaagggtacgatttttcatggaaattcact
gcactgtaagggtccgattttggaagccaaattttgggccgaacgtatgg
tcgttttcagatcgagtgccccccccccccggggagcTAAGAGATTGGGT
GAAACGTTCGAAGTATTTCGAGGGTCAATCGGTGCAAGTTTAGTGTGTGT
AAAGAACCATCCATTGATGGTACTAAGTCTTTAAGTTCCAACCGGGTCTT
CCTATAAACTTTCGACCACATTTCGATATTGTCAAATTTTCTTCAAGGAC
GTTTTATGGATGAAGTCTACTATCGCAAAAAAGTGTCCTTCATAATGGTT
TGGTCTCAAATTTGAATCCTTACAGTTTCTTCTCTCCTCTTTCATTTTAG
GCAAGAAGTTCACAAGTCCCTATCAACGTAGTGAAGTCACTCGTACAATT
CTACCTCAGAAAACAAAGAGCACAAGAAGAAATAATTATCGTCGAGGAAG
AAATGAGATCGACATTGCACTTTTGGGAAAATCAATTGACTTTTCTTGAT
GAATGTGCTTCACACCAAACTTCTGTTGGGATTAGATACCTCTTAAGAGA
AAGAATCTTGATTGTGAAGAACTTCCTTGGGgatttaaaaaaactctttg
AGTTTGCTACCGAGCCAGTAGAACGAGTAGAAATTAATCACACGAATAAT
CATATCTCCTTGAATGGCTCCGAAAATGAAGAGTACCTATTCAGTGATCA
AGATTTTTCGAGCGATGAAGAAGCCATATCATCTGGTGACAGTGACAGCG
ACACTGGTGACTCTGTTTTAAGTGATGACTTGTACATATAAATTATTTTG
CCAATgatgtttgctattttttacTGTTGTATATAACTATCGTTacaaag
aaaagcattttttacCTGCGTCTTTTTCTTCTC Coding sequence (CDS) from alignment at sc0000229_pilon:472335..480917+ >MSTRG.19713.2.p3 ID=MSTRG.19713.2.p3|Name=MSTRG.19713.2.p3|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2754bp|location=Sequence derived from alignment at sc0000229_pilon:472335..480917+ (Clytia hemisphaerica_ch_hm2_pilon)
atgaaaaagaaaacatttaacAAGTATCAACACTTCAAGTTTGGTATCCC
AGTTTTCCATTCTTATGGTCATAAAGGAGACTGCCAGGTGAAAAATTCAA
TAAGGAGATTGGATACATTCGGACTGATGGATGGAGAACTAATGGAGAGA
TTATGGTCTTACCTtcgatcattttcaaaaataacaaaggaaatGACCCC
TGCCCACCGCACAGATTTGCTAAGTGATGCACTGATGCATTTTGGCTCTa
aaaaaaTGGGAAACATCGGAAAATACCTTGTGTTTTTACATCACAAAGCA
ACCGAAACTGTAAATTCTTGCAACACAGAGATTGAATCGATATGCTCAAA
ACTACCTGTTGTTGTGAATGAGGAAATTATCAAAACGTGGAAAATAGAGG
AAGACAATATCGTAAGCAAGAACGGAAAAGCTCTAGAAGCAGTTACAGGG
ACTATTTGAatgaaaaagaaaacatttaacAAGTATCAACACTTCAAGTT
TGGTATCCCAGTTTTCCATTCTTATGGTCATAAAGGAGACTGCCAGGTGA
AAAATTCAATAAGGAGATTGGATACATTCGGACTGATGGATGGAGAACTA
ATGGAGAGATTATGGTCTTACCTtcgatcattttcaaaaataacaaagga
aatGACCCCTGCCCACCGCACAGATTTGCTAAGTGATGCACTGATGCATT
TTGGCTCTaaaaaaaTGGGAAACATCGGAAAATACCTTGTGTTTTTACAT
CACAAAGCAACCGAAACTGTAAATTCTTGCAACACAGAGATTGAATCGAT
ATGCTCAAAACTACCTGTTGTTGTGAATGAGGAAATTATCAAAACGTGGA
AAATAGAGGAAGACAATATCGTAAGCAAGAACGGAAAAGCTCTAGAAGCA
GTTACAGGGACTATTTGAatgaaaaagaaaacatttaacAAGTATCAACA
CTTCAAGTTTGGTATCCCAGTTTTCCATTCTTATGGTCATAAAGGAGACT
GCCAGGTGAAAAATTCAATAAGGAGATTGGATACATTCGGACTGATGGAT
GGAGAACTAATGGAGAGATTATGGTCTTACCTtcgatcattttcaaaaat
aacaaaggaaatGACCCCTGCCCACCGCACAGATTTGCTAAGTGATGCAC
TGATGCATTTTGGCTCTaaaaaaaTGGGAAACATCGGAAAATACCTTGTG
TTTTTACATCACAAAGCAACCGAAACTGTAAATTCTTGCAACACAGAGAT
TGAATCGATATGCTCAAAACTACCTGTTGTTGTGAATGAGGAAATTATCA
AAACGTGGAAAATAGAGGAAGACAATATCGTAAGCAAGAACGGAAAAGCT
CTAGAAGCAGTTACAGGGACTATTTGAatgaaaaagaaaacatttaacAA
GTATCAACACTTCAAGTTTGGTATCCCAGTTTTCCATTCTTATGGTCATA
AAGGAGACTGCCAGGTGAAAAATTCAATAAGGAGATTGGATACATTCGGA
CTGATGGATGGAGAACTAATGGAGAGATTATGGTCTTACCTtcgatcatt
ttcaaaaataacaaaggaaatGACCCCTGCCCACCGCACAGATTTGCTAA
GTGATGCACTGATGCATTTTGGCTCTaaaaaaaTGGGAAACATCGGAAAA
TACCTTGTGTTTTTACATCACAAAGCAACCGAAACTGTAAATTCTTGCAA
CACAGAGATTGAATCGATATGCTCAAAACTACCTGTTGTTGTGAATGAGG
AAATTATCAAAACGTGGAAAATAGAGGAAGACAATATCGTAAGCAAGAAC
GGAAAAGCTCTAGAAGCAGTTACAGGGACTATTTGAatgaaaaagaaaac
atttaacAAGTATCAACACTTCAAGTTTGGTATCCCAGTTTTCCATTCTT
ATGGTCATAAAGGAGACTGCCAGGTGAAAAATTCAATAAGGAGATTGGAT
ACATTCGGACTGATGGATGGAGAACTAATGGAGAGATTATGGTCTTACCT
tcgatcattttcaaaaataacaaaggaaatGACCCCTGCCCACCGCACAG
ATTTGCTAAGTGATGCACTGATGCATTTTGGCTCTaaaaaaaTGGGAAAC
ATCGGAAAATACCTTGTGTTTTTACATCACAAAGCAACCGAAACTGTAAA
TTCTTGCAACACAGAGATTGAATCGATATGCTCAAAACTACCTGTTGTTG
TGAATGAGGAAATTATCAAAACGTGGAAAATAGAGGAAGACAATATCGTA
AGCAAGAACGGAAAAGCTCTAGAAGCAGTTACAGGGACTATTTGAatgaa
aaagaaaacatttaacAAGTATCAACACTTCAAGTTTGGTATCCCAGTTT
TCCATTCTTATGGTCATAAAGGAGACTGCCAGGTGAAAAATTCAATAAGG
AGATTGGATACATTCGGACTGATGGATGGAGAACTAATGGAGAGATTATG
GTCTTACCTtcgatcattttcaaaaataacaaaggaaatGACCCCTGCCC
ACCGCACAGATTTGCTAAGTGATGCACTGATGCATTTTGGCTCTaaaaaa
aTGGGAAACATCGGAAAATACCTTGTGTTTTTACATCACAAAGCAACCGA
AACTGTAAATTCTTGCAACACAGAGATTGAATCGATATGCTCAAAACTAC
CTGTTGTTGTGAATGAGGAAATTATCAAAACGTGGAAAATAGAGGAAGAC
AATATCGTAAGCAAGAACGGAAAAGCTCTAGAAGCAGTTACAGGGACTAT
TTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000229_pilon | genome | sc0000229_pilon:472335..480917 + |
|
