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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000228_pilon:501625..505861- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.19690.1.p1 ID=MSTRG.19690.1.p1|Name=MSTRG.19690.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4237bp|location=Sequence derived from alignment at sc0000228_pilon:501625..505861- (Clytia hemisphaerica_ch_hm2_pilon)
CATAGAAGAATAAAATACAAACCACACTATGACAACCACTCAAACATTAA
GGTACTTGGTCACACTGGCCATATTAACGACGATTACAACTGGCTTTCCC
ATTGGTCATCACAGTAAGGGCCTGAGCACGACTTGTGCATACTTCTCGTG
GGTATTATGCGACGCACCGAAGAAGAGAGACAATATTGAAACTAATGAAG
AATCAAACGTGAGTAGCGTCCAAGCTTGCACACAACGTTGTTTCAACGTT
TATCTAACGTTATATGGACGTTGTGAACGTTAGATAAACGTTGAAACAAC
GTTGTGTGCCAGCTTGGGTTTAACTCATAAACCGTTAAGTAATTTTTTCG
AACGGAGTAGGAACGAAAGGCTCTTCTTTTTCTAATCTCCGAGCAGATTT
TGATACTCTGCGCATGAGACCAATAACAAACATAAAAATCAGAAGCCAGT
CGCTTTCACTTTCGTTTTCGAGCAAAATGAAACGCGGGTTTTGATTGTTT
TGACAACTGTGTCAAACCGTCATATTTGCCATGCGCAGAATGAATGATCT
GTTATGAGATTATTCTTTTTCTAACTAACTTCCCGAAGGTAGGGGAAAGG
GTACCGGCTTACCCTTAATCCTCCTCCTCAATCTAAGAAGAAAAACATCA
ACTAACTTTTTTATTAAGTTCCTGGTAAGTCTTTGGCCTGAAGTCTTACC
ATAGTCCATACAAAAAACCCCGGTCTGGAACCCTTTTGTTTCTTTCCATT
GTTTCTTAGTTGAACTTGCGTTCATAAATCAGTTTGTTTTGCTCACTTTT
TGATCATGTGATTAAATCTTAAACCAATCCCAAGGGGAGTACTTGGTAAC
GTGATAAAAAAATGAGCAAATCGATTTTCATCTTTTGATAATAACAAAGG
AAAAAGCTAACAAAAAGTTAAAACAATAAGCTTCCAGACCAGTGTTTTTT
ATAAGGACTATGGTCTTACGCACCTAACTAACTGGAAAATGTTAGATAAC
AATTTTGTAGCCGCACTGGTTGGGAAAATACCGATCTTCCAACAAAAAAA
TGGGTCATAATGTCTCGACTCATTGAACATTAGGACCTGAGTTGAATGAG
TGAAAATAATTAAGACATATGTGAGAAACATTTTCTTGATCTAAATCACA
AGAAAGAGGGAATGAAACTTAACCTTTCCGCCCCGAAAGACGTATCTGAT
ACGTTCGCCATACGTTCCGAAAGACGTATCTGATACGTTTTTAAGATGAC
CTTTATATTTGGTCGGATTACGCCCCAACCGTCAGAGGTACGGTAAAACC
GATTAAAAAATCGGAATCAGCGTGAAATTTCCGATAAGAAACAATCGGGG
TTTGTTTTGGTATGACGCAACATTTTTCAAAAATAGAAATGGTAGACCAA
GCTGTGTTGCGTGATTTTGTGAAACTGGAGGAGGCAGAAAGTTAGCTATG
AAAGTAAGGGTTTATAAAAGTGTTTTAGAGTTTTATTTGGCTTTTCAAAA
GTATGGAATTGTATTACCTAACTATAAAGAAACCTTCGAAAGAAAAAAGT
AAGTGTTTTTATCAATTTTTCAGTTCTCTATAATTTTTTGAAGTTTTGCA
CCAAAAAATGACTTTTTCGTGACATTGTTTTTTCATATACCTTTTGTCTG
GCTTCATAATTTCTGTCCAAAATTGTTTGAAGTACTCAGTTAAACATATT
TAGAAAGGGGAAAGGTAGGGCTTTCCAAAAATATAATTTTTTATGGGTTT
TTTTCTGAAGTTAATTTTTCAAAAAGTTATAACGGTTATCGTGAAAATTG
CATTTTCATCAAAAAACGTTGCGCGCAGACGGGCTGAAGATATAAAAATG
TTGCGCGCTGGAAAGGTTAAGAATTGCATATTCCATGCTTCTATCTCTTT
AATTTTGATCCTGCAAACAATACGACTGTTCGAATGACAAAAATACAGAC
CCGCTGGGACCCCAACCACACTGGAAAATTTGACAAAAGTTTATTTGTCC
CCGGTGGGAAAATACCCTGGAATTTCAGCCCCACTGGGACTTTGACTTTG
ATTTTATCCCCATTCGAGATCCAAAACCATGGGATGAGCTGGAGTTTTTA
CAAGATACTTCACTAATTGGTCATTTAAAGTGATAGAGATGACGCCTTCT
TTAGAAAAAGTAATAAGATTCTTTTATTACATCTTAACGACCAACCAAAT
CAAATAAGAGCTTGTAAAAACTCCAGCTTGTCCCAAAACCATCCCCACTG
GGTTTTTTAACCTTGGTACAATAAATTTTTTATCCCCATTGAGATTTCAA
TAGGAATTTTTATCCCCACTGAGGAAAAGAGTTCCACCGGGGCTGTGAGA
CAGGGGTCAAAACACGACAAGAGGTCAAATATACAAAATCAACTCAACGT
TGATTATTTTTTTCCCCAAAAATATAATCTTGGATAAATATTGGATAAAT
AAATTTTCCTCAATTTTTGTGACGTTTTGCGAAGCTCTCGAGCTTAAAGA
CTTAAAAAAAAAAATTCAAACCTAAAAATCTCTCTTCATCAATTTTGATG
CAATAATTCAAAGTGGACACTGCTTTTTATGATAAATTTACCTTGGCTAC
AACTTTGACCGTTCTGTCTCTTTCTCTCTTGTGATTAAAATCAACCCTTC
AAACCCGAGTGACGCGTATACACGTTTCAAATTAGCAAATATACCAAAAA
GGCCCTGACTTAAGGATAAAACTCCTGACCACTAAATCTAAAAGGCCATA
AACAGAATGCCTTTTAAAAGATTTAAAAGATAAGGTTTACAAGGTTTACA
AGGTTTGTTTGGTCTACAAGGTTTTTTCGTTTAAGACGGAAAACGGATTT
TACATAGCAATTTTAGGACATTTCGGTGAATTGTACAGAATTTTGAGACG
GAAGTCCCTCTTTATTTACTTCACTGAGGTACAGAAATCCGTCTGAGTCG
GAAGAAGTTTGAACACCGTCCAACGGTACCAAAGCCATTATTGTCTAAGT
GTCAAGTTACAAGCTTTTATGCCAGTTTGAAGTTTTGGATTTCAAAAAAA
AGTTGAAAGTTTTCACATTTTTCAAAACATATTGCACGCTGGAAAGGTTA
ATTTAATTCGCACTTTACCGTACGAAATGCTAATTTTAAACCATTTTTTA
AGCAAAAAAGTCGATAAAGAAAGTAGCATAAAACTTTATTAAATGAGCCT
ACAATGAATCTGATAGCTTGTACTCAATGAAATTTTGATTTGTATTCGTT
TTTTAGAATTTAACGATGCAAACTGACGGGAAAACAGATAGCGAAGAAGA
AGAAGGCGAAAACGAAGAAACGAAGGAATCAACGAACGAAGGAACGAATG
AATCGACCAACGAAGGAACGAATGAATCAGTTAACGAAGAAGAGATGCAA
CAACAGATCGAGAAGTCATTAATTGATTTACAAATCGAACATATCCGGAA
ATATGTACTGAATGAAATTTTAGACAGTAAAAACATGACGCTACCTGAAA
AAGAACATTTGCTGGATGAGGCTCTGGAACTAAGATGATATAGAAGTCTA
CCTGACATGCATAACACGTTTTCTTTTCTATAAAAACGCCAGAAATGTTT
TAAGCCAAAGGGAATCATCCTGAAATTTTCTTATTTAAAGCATTTTAAGA
GCATATTTTAGTGTAACTTAAAATTTGCACGTTTTAGAGTCTGCAATGCC
TTAAAATGTCCTTAGAATACTCTTGATTTTTTTGGCTTCGAAGCCTGTGT
TCTAATAACATTGTTCTTAGACAAACAGCGTGTGTTATAATGACCAAGGG
ATAAACATTAGAATAAATATAAATATTATTAGACTAAATTAGTTAAAAAC
GAATAATAAGAGGCAAACAAATCAAGTATCACAAATCCACATCGAAAGGA
TGGTGGCATAACCTTGCGGTCACACCGGGCGCAAACTAACGAGAATGCAA
AAGTGTGAAAAAAAATATTAAAATCTCAAAATCGACGAATATAAGAATAA
GTGTGTTATAATACCACCCAATACCTTCTTAGCGGGTACGAAACGTCACA
ACTACATCGATCCTGACGCACATAAGTCGTTCAGAAGCTTGGCTTGGTTA
ACACAATTCATGTTCTTAAAGGCAAAAATCAAAACCACCAATCCAAATAT
GGAAAATTTGGATGAGGTCATCATAATCCTCCAAAAATTAAAACTCATTA
AACTTGTAAATAATCATTCAATAATTCCTTTATCAAG Coding sequence (CDS) from alignment at sc0000228_pilon:501625..505861- >MSTRG.19690.1.p1 ID=MSTRG.19690.1.p1|Name=MSTRG.19690.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=924bp|location=Sequence derived from alignment at sc0000228_pilon:501625..505861- (Clytia hemisphaerica_ch_hm2_pilon)
AATTTAACGATGCAAACTGACGGGAAAACAGATAGCGAAGAAGAAGAAGG
CGAAAACGAAGAAACGAAGGAATCAACGAACGAAGGAACGAATGAATCGA
CCAACGAAGGAACGAATGAATCAGTTAACGAAGAAGAGATGCAACAACAG
ATCGAGAAGTCATTAATTGATTTACAAATCGAACATATCCGGAAATATGT
ACTGAATGAAATTTTAGACAGTAAAAACATGACGCTACCTGAAAAAGAAC
ATTTGCTGGATGAGGCTCTGGAACTAAGATGAATGACAACCACTCAAACA
TTAAGGTACTTGGTCACACTGGCCATATTAACGACGATTACAACTGGCTT
TCCCATTGGTCATCACAGTAAGGGCCTGAGCACGACTTGTGCATACTTCT
CGTGGGTATTATGCGACGCACCGAAGAAGAGAGACAATATTGAAACTAAT
GAAGAATCAAACAATTTAACGATGCAAACTGACGGGAAAACAGATAGCGA
AGAAGAAGAAGGCGAAAACGAAGAAACGAAGGAATCAACGAACGAAGGAA
CGAATGAATCGACCAACGAAGGAACGAATGAATCAGTTAACGAAGAAGAG
ATGCAACAACAGATCGAGAAGTCATTAATTGATTTACAAATCGAACATAT
CCGGAAATATGTACTGAATGAAATTTTAGACAGTAAAAACATGACGCTAC
CTGAAAAAGAACATTTGCTGGATGAGGCTCTGGAACTAAGATGAATGACA
ACCACTCAAACATTAAGGTACTTGGTCACACTGGCCATATTAACGACGAT
TACAACTGGCTTTCCCATTGGTCATCACAGTAAGGGCCTGAGCACGACTT
GTGCATACTTCTCGTGGGTATTATGCGACGCACCGAAGAAGAGAGACAAT
ATTGAAACTAATGAAGAATCAAAC
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000228_pilon | genome | sc0000228_pilon:501625..505861 - |
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