|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000228_pilon:279175..281677- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.19672.1.p1 ID=MSTRG.19672.1.p1|Name=MSTRG.19672.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2503bp|location=Sequence derived from alignment at sc0000228_pilon:279175..281677- (Clytia hemisphaerica_ch_hm2_pilon)
CTGTGATCTAAAGTATTGGATTTCATGATAGCACACGAGGTAAATTGTTT
AGGGATTAAAAAATTGAGTCATTGATCAATTCTTAATTTTAGTAATTTTA
GTATAATTAAAAGAAATTTCTCAAGACATAAGAACACTTATAATCCTGGT
AATGATTCAATGACAACTTAGATCGCTTAAGACGCCATGGGCGAGATAGT
TGCAGCCAAACTTACCATTGGGTTGGTATGGAAGCTGTTTGCACCAGCAG
CAGCACAGAAATTGCAATATGGGGATGTAAGCGAGGAAAAAATCCGACAG
ATGTTGTTGTCGGAATTCAGCAAAATCCACGAATCATTGAACGCGTTGAG
AAGAAAGGAGTTGGTAGCTGCCATAGCTTTCATGGAAACAGGTAGGAGAA
GGCAAACACTTTAAGTCAAGACGAGTCTCAATAAACCTCGAACGATTTTC
CATCCCTAAACTAGTTTACCGTTCTAAAACTCAACTAATTACTCCCTTAT
TCGAATGGTTAGTGAGATATTCTCCCCCAAATTTTATTACACATTTTGGA
AGTGACAGTTATTTGTGGTGTTTACATTTTTTCAGATCGATTGAATGCTC
TTTTTGCGACGCTTGTAGACCTTTTCATAAATTACGTCAGGGTAACTCCT
TTGCGATTCAATTACAGTTACGATCAATGCAAAACTAGGAAGGATAGCCT
AAAGGGGTTTGGAAAAAAACACATGTTATAGGTTTCACTTTCTCGCTAAT
ATTTACAGGTTTTGAATTACTGGGAAGAGATTTGAAAACGGCAAGAGAGG
AGTTCCGTAAAGCGAGAGATGCCGGACAAATGGCATTTGGGGTCGTTCCG
GAGACTACCGACAAAATCCTTGCTACTAAGGTCATGGTGACTTCAACTTT
TTATGAATTTCAAGACAACGTCGAAACAGCCCGTACGCTATGCACTAAAT
ATCTTGACCGCATGAATACTATGCCAGAAGTTGTACGAGCGTGCGAAATG
ATTTACACGCCTCAGAAATCTGTCGCGGGTAGGCTACTTTCAATCCACGG
AAAGGAGAAAAGGAATGATATTTTACAGAACGCCGCTGAAGTCAATATCT
CTGTATGGAACTATATGCGTGATCTCCTTCAAACGGATTTCGAAGTGAAA
CCGTCAATCCGATTCGGAAAATTTCGAATCAACCCGATTTCCGATTTAGT
CTTAATGCGAAAACCGACAGTGATTGCAGAGATTGATAAATGCCAATCAA
ACTTCATTTCCGTGACAACGGCACCGGGTTATATTTTCGCAGCAATCGGG
GAATCGGGAGAACTTCAACAGACGAATGTCATCCTTGCGTTGAATTTGCA
AACGTGTCATGTGACCAATCTATTGGTTCACGAAAAGACAGTGATGACGG
TTGAATACGACGGCCAAAACCTTTGTTCAGGTTCGGCAGATAAATCCATA
GTTATCTGGGACATGGACTCTCTAGCTCCGGTAAAAATCATTCAACAACA
CGAAGGTTCAGTTAGAACTTTATGTCACACCGATGATTATCTCATCTCTG
GTTCCGCTGATTCAACTATCTGCGTATGGAAGAAAAATGAAAGTTATGAG
CTGCAGACCGTCATGGATGCCGGGGCACCAGTTATGGTTGTCCAGGCATC
CCGGCGTAAATTTTTATTCTCAATAAGCGGTATTTCAACAGTGCGTATAT
GGGATTTATCAAAATTTACTACTCTACAAGAAGTGAATATCTCAACTTTC
GGTCAAGCCACGGTTCCGAATATTCAATGTCCGGAAATTATCGCTAATGA
TAATATGATGATTATACCGGTCAAATCAGAAGACGGTGAACACATCCAGT
GCTGGAATCTCGGCTGTTTATCACTCTCAGAAAGCATACCAAATACCGGA
CACAACATTGCCAAGTTTTACAACAACCCTTACGTGTTTTGCGGTTCGGA
CAAAGTGAAGATGGTCACTTCTTCCGGACGCGTTATTACAGAACAGGATA
TTTATATCGGACAGACCCGTGTCAAGCGGATACTCAAAATGTGGATTGAG
AAGTGTTATTTGTACATGATGTGTCAAACTGAAAGAGACTCGTTTTTCAT
AATAAGGTACTAATTGGACATCGAGTTTTTTTGGGTCGATCCCTTCCTTT
TAGTATTATGGAAAATATTTTTGTCTTTCGATTTTTATAAATGATTATGA
ATAATTTAATTTTGTAATTTCCGCAGAGCAGGCTCTACACGTTTTTGTGA
AAAATATTTTATGGATGTATGCGGTTGAACATAGATAGTTTCATCAAGTG
ATTAAATTCAAAGAAAAAAGAAAATAAAGCAGTTTTTAGTAAGGCCTGCC
ATGTACTGTATGAAAGAAAAGTTTACCGCAAATTATTTCGTTTCTATTCT
CATATGCGATTACAAGTTCTTACAACATAGGAAATTACATTTTGATTTGC
AAACGTTAGCAATTTTTATTGAGAGAAATCCGATAATAAAAGAGATAACA
TTC Coding sequence (CDS) from alignment at sc0000228_pilon:279175..281677- >MSTRG.19672.1.p1 ID=MSTRG.19672.1.p1|Name=MSTRG.19672.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3120bp|location=Sequence derived from alignment at sc0000228_pilon:279175..281677- (Clytia hemisphaerica_ch_hm2_pilon)
GTTTTGAATTACTGGGAAGAGATTTGAAAACGGCAAGAGAGGAGTTCCGT
AAAGCGAGAGATGCCGGACAAATGGCATTTGGGGTCGTTCCGGAGACTAC
CGACAAAATCCTTGCTACTAAGGTCATGGTGACTTCAACTTTTTATGAAT
TTCAAGACAACGTCGAAACAGCCCGTACGCTATGCACTAAATATCTTGAC
CGCATGAATACTATGCCAGAAGTTGTACGAGCGTGCGAAATGATTTACAC
GCCTCAGAAATCTGTCGCGGGTAGGCTACTTTCAATCCACGGAAAGGAGA
AAAGGAATGATATTTTACAGAACGCCGCTGAAGTCAATATCTCTGTATGG
AACTATATGCGTGATCTCCTTCAAACGGATTTCGAAGTGAAACCGTCAAT
CCGATTCGGAAAATTTCGAATCAACCCGATTTCCGATTTAGTCTTAATGC
GAAAACCGACAGTGATTGCAGAGATTGATAAATGCCAATCAAACTTCATT
TCCGTGACAACGGCACCGGGTTATATTTTCGCAGCAATCGGGGAATCGGG
AGAACTTCAACAGACGAATGTCATCCTTGCGTTGAATTTGCAAACGTGTC
ATGTGACCAATCTATTGGTTCACGAAAAGACAGTGATGACGGTTGAATAC
GACGGCCAAAACCTTTGTTCAGGTTCGGCAGATAAATCCATAGTTATCTG
GGACATGGACTCTCTAGCTCCGGTAAAAATCATTCAACAACACGAAGGTT
CAGTTAGAACTTTATGTCACACCGATGATTATCTCATCTCTGGTTCCGCT
GATTCAACTATCTGCGTATGGAAGAAAAATGAAAGTTATGAGCTGCAGAC
CGTCATGGATGCCGGGGCACCAGTTATGGTTGTCCAGGCATCCCGGCGTA
AATTTTTATTCTCAATAAGCGGTATTTCAACAGTGCGTATATGGGATTTA
TCAAAATTTACTACTCTACAAGAAGTGAATATCTCAACTTTCGGTCAAGC
CACGGTTCCGAATATTCAATGTCCGGAAATTATCGCTAATGATAATATGA
TGATTATACCGGTCAAATCAGAAGACGGTGAACACATCCAGTGCTGGAAT
CTCGGCTGTTTATCACTCTCAGAAAGCATACCAAATACCGGACACAACAT
TGCCAAGTTTTACAACAACCCTTACGTGTTTTGCGGTTCGGACAAAGTGA
AGATGGTCACTTCTTCCGGACGCGTTATTACAGAACAGGATATTTATATC
GGACAGACCCGTGTCAAGCGGATACTCAAAATGTGGATTGAGAAGTGTTA
TTTGTACATGATGTGTCAAACTGAAAGAGACTCGTTTTTCATAATAAGGT
ACTAAATGGGCGAGATAGTTGCAGCCAAACTTACCATTGGGTTGGTATGG
AAGCTGTTTGCACCAGCAGCAGCACAGAAATTGCAATATGGGGATGTAAG
CGAGGAAAAAATCCGACAGATGTTGTTGTCGGAATTCAGCAAAATCCACG
AATCATTGAACGCGTTGAGAAGAAAGGAGTTGGTAGCTGCCATAGCTTTC
ATGGAAACAGGTTTTGAATTACTGGGAAGAGATTTGAAAACGGCAAGAGA
GGAGTTCCGTAAAGCGAGAGATGCCGGACAAATGGCATTTGGGGTCGTTC
CGGAGACTACCGACAAAATCCTTGCTACTAAGGTCATGGTGACTTCAACT
TTTTATGAATTTCAAGACAACGTCGAAACAGCCCGTACGCTATGCACTAA
ATATCTTGACCGCATGAATACTATGCCAGAAGTTGTACGAGCGTGCGAAA
TGATTTACACGCCTCAGAAATCTGTCGCGGGTAGGCTACTTTCAATCCAC
GGAAAGGAGAAAAGGAATGATATTTTACAGAACGCCGCTGAAGTCAATAT
CTCTGTATGGAACTATATGCGTGATCTCCTTCAAACGGATTTCGAAGTGA
AACCGTCAATCCGATTCGGAAAATTTCGAATCAACCCGATTTCCGATTTA
GTCTTAATGCGAAAACCGACAGTGATTGCAGAGATTGATAAATGCCAATC
AAACTTCATTTCCGTGACAACGGCACCGGGTTATATTTTCGCAGCAATCG
GGGAATCGGGAGAACTTCAACAGACGAATGTCATCCTTGCGTTGAATTTG
CAAACGTGTCATGTGACCAATCTATTGGTTCACGAAAAGACAGTGATGAC
GGTTGAATACGACGGCCAAAACCTTTGTTCAGGTTCGGCAGATAAATCCA
TAGTTATCTGGGACATGGACTCTCTAGCTCCGGTAAAAATCATTCAACAA
CACGAAGGTTCAGTTAGAACTTTATGTCACACCGATGATTATCTCATCTC
TGGTTCCGCTGATTCAACTATCTGCGTATGGAAGAAAAATGAAAGTTATG
AGCTGCAGACCGTCATGGATGCCGGGGCACCAGTTATGGTTGTCCAGGCA
TCCCGGCGTAAATTTTTATTCTCAATAAGCGGTATTTCAACAGTGCGTAT
ATGGGATTTATCAAAATTTACTACTCTACAAGAAGTGAATATCTCAACTT
TCGGTCAAGCCACGGTTCCGAATATTCAATGTCCGGAAATTATCGCTAAT
GATAATATGATGATTATACCGGTCAAATCAGAAGACGGTGAACACATCCA
GTGCTGGAATCTCGGCTGTTTATCACTCTCAGAAAGCATACCAAATACCG
GACACAACATTGCCAAGTTTTACAACAACCCTTACGTGTTTTGCGGTTCG
GACAAAGTGAAGATGGTCACTTCTTCCGGACGCGTTATTACAGAACAGGA
TATTTATATCGGACAGACCCGTGTCAAGCGGATACTCAAAATGTGGATTG
AGAAGTGTTATTTGTACATGATGTGTCAAACTGAAAGAGACTCGTTTTTC
ATAATAAGGTACTAAATGGGCGAGATAGTTGCAGCCAAACTTACCATTGG
GTTGGTATGGAAGCTGTTTGCACCAGCAGCAGCACAGAAATTGCAATATG
GGGATGTAAGCGAGGAAAAAATCCGACAGATGTTGTTGTCGGAATTCAGC
AAAATCCACGAATCATTGAACGCGTTGAGAAGAAAGGAGTTGGTAGCTGC
CATAGCTTTCATGGAAACAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000228_pilon | genome | sc0000228_pilon:279175..281677 - |
|
