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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000228_pilon:271780..273901- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.19671.2.p1 ID=MSTRG.19671.2.p1|Name=MSTRG.19671.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2122bp|location=Sequence derived from alignment at sc0000228_pilon:271780..273901- (Clytia hemisphaerica_ch_hm2_pilon)
TTTTTCCTCCTAAACGATCAAAAAGTAAAATCAAAACCAAAAAGGCAAAA
CGAGTAAATAACATGAGGTCCATAATAATTATTTTGTTGATAATTTTTAT
CACCGTTTATGGATTGTATGCTGACGAATGCTCGTGTGAGAATCCATGTT
CTCCTGGTTTCCGATGTACCAGGTGTAATGACCGTACTGGTTATGGTTCT
AGGTGGTGTAATGGTGAACTCAAATGTCAACCATGTAGCAAAGGGCGCTA
CTCAAATAGACCAAATTGCGATAAGCATTGTATGGATTGTGAAAAGGGTT
ATTACAGTGATGTCAGAGGGGCCACGGAATGTAAACCATGCCCAGCAGGT
CATAGCTGTGACTTTTTTAACAAGCCAATAAAATGTCGTAGAGGATACCA
TAACCCGCAAATTGCAAATCCGCTTGGTTGTCAGCCTTGTGGAAAAGGTA
AATACAGTGATCAAATTGGCGCACTGGAATGTAAGACATGCCCTGTTGGG
CATTGGTGTCATTCCTGGGTGAATAAATACGCAACACCATGTTACTGGGG
ACAATACCAAGACGAAGTTGGTCAAACCACGTGCAAGATTTGCGAAGCAG
GTACCTACACCGACAAAAGGAGGTCTACTCGATGTACGCCGTGCGGCTTA
GGACAATATCAACCATCGTTCATCTATTTCGGTAATCAACGCGCAGACTG
CAAGAGATGCGGTGAAGGGACGTACAGTGACGTTGAAGGTGCTGTAAAAT
GTAAGACATGCCCTAAAGGACATTATTGTCCAAAGTACTGGGTCAATCAT
CCCTTGAAGTGCCCACCACGAAAATACCAAGACCAACCTGGTCGAGTGGC
ATGTAAATGGTGCAAGCCTGGTACATACAATCTGAAAGAAGGCGCATCCA
AATGTGAGCTTTGCCCTGCTGGTAGTAAATGTATTCATGGTTTTCCCATT
ATCTGTCATTATAAGTATTACTCTCCAGAAGGCTCTGATGAATGTCTCAA
ATGCCCAAGAAAACATTTCTGTCCAATTCCTTCGCTTGAACCCATTCCCG
AGAGTAACAACAGAATGATCAAAACGCTGATCCATAAAGCTGCATTACTC
TCTGAAGAAACGTACCACAGAAAACACAGTGAAGGCAAAACAGTTTATGG
CTTCGTGGAGTACAGATACGACTTCATTGTAGTTGCTTTTAGAGGAACAG
ATACTTGGGAAGATCGACTTACTGATGCACTGGTCGTTAAAAAGTCTTAT
AGCGGTTGTGGTGGATGCCAGGTTCACACTGGGTTTCTGAACTCTTATAG
TATTGTACGCAAACCAATGCTTGAAAAAGTTGACATTTTAACCAGGAAAC
ACCCAAAAGCAAAAATATTGGCCACAGGGCATTCTTTGGGAGGAGCTAAA
GCGGCTCTGGCAGCTTATGAACTTTCAATGAGAGGTTATCTTGTTGATTA
TGTAACTTTCGGTTCACCTAGACCTGGAAATGTTATATTTGCTAATAATG
TCAATCGAGCTGTTCGAGGAATGAATCTAAGGGTAACGTTTGGAAGGGAT
ATTGCTACAGTCGTTCCACCAAAGAATTCAGGTTATTCACATATCGGCAA
AGAAATACATTTTACAGACCAGAGCACAATGCATGAACTACCTGGCTATG
TGGATTATGCGTATGGTGCTCTACGTAGAAACAGTTTCTGGGATCACAAG
ATGAAAAATGGCTACCGCTGGTTAAGGTAAGCATCATTGTTTTATGCAGT
CTGGTTTTGACCGATTCGATTTTGCTGTGTGTTATTTTACTACAACATAC
TTTTCATTAAATGTTATCCTTGACTTTAGAGACGAGTAACACATCTAGAG
ATTGAAGAACTGGGTACTGCAATGGCTGATCGCAAGCTTTGGAGGGAGGA
TTATTGTTTGTTCGAACCTAGATTGAAGGATAATGATGATGCTGAATATT
ATAACAATATAATACCTCATTATTTACGACCTATTTCAATGTTTTATGAT
TTTCATGATTTCTTGAATGATTCTTAAGATTACTTTTTTGACTGTTACGA
TTTTAATGAAGAAACTTTTGATGCTTATGTTTATTGACCTAAGAAAATTC
AATAGTTTTTGCTGATGTACAC Coding sequence (CDS) from alignment at sc0000228_pilon:271780..273901- >MSTRG.19671.2.p1 ID=MSTRG.19671.2.p1|Name=MSTRG.19671.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3348bp|location=Sequence derived from alignment at sc0000228_pilon:271780..273901- (Clytia hemisphaerica_ch_hm2_pilon)
AGACGAGTAAATGAGGTCCATAATAATTATTTTGTTGATAATTTTTATCA
CCGTTTATGGATTGTATGCTGACGAATGCTCGTGTGAGAATCCATGTTCT
CCTGGTTTCCGATGTACCAGGTGTAATGACCGTACTGGTTATGGTTCTAG
GTGGTGTAATGGTGAACTCAAATGTCAACCATGTAGCAAAGGGCGCTACT
CAAATAGACCAAATTGCGATAAGCATTGTATGGATTGTGAAAAGGGTTAT
TACAGTGATGTCAGAGGGGCCACGGAATGTAAACCATGCCCAGCAGGTCA
TAGCTGTGACTTTTTTAACAAGCCAATAAAATGTCGTAGAGGATACCATA
ACCCGCAAATTGCAAATCCGCTTGGTTGTCAGCCTTGTGGAAAAGGTAAA
TACAGTGATCAAATTGGCGCACTGGAATGTAAGACATGCCCTGTTGGGCA
TTGGTGTCATTCCTGGGTGAATAAATACGCAACACCATGTTACTGGGGAC
AATACCAAGACGAAGTTGGTCAAACCACGTGCAAGATTTGCGAAGCAGGT
ACCTACACCGACAAAAGGAGGTCTACTCGATGTACGCCGTGCGGCTTAGG
ACAATATCAACCATCGTTCATCTATTTCGGTAATCAACGCGCAGACTGCA
AGAGATGCGGTGAAGGGACGTACAGTGACGTTGAAGGTGCTGTAAAATGT
AAGACATGCCCTAAAGGACATTATTGTCCAAAGTACTGGGTCAATCATCC
CTTGAAGTGCCCACCACGAAAATACCAAGACCAACCTGGTCGAGTGGCAT
GTAAATGGTGCAAGCCTGGTACATACAATCTGAAAGAAGGCGCATCCAAA
TGTGAGCTTTGCCCTGCTGGTAGTAAATGTATTCATGGTTTTCCCATTAT
CTGTCATTATAAGTATTACTCTCCAGAAGGCTCTGATGAATGTCTCAAAT
GCCCAAGAAAACATTTCTGTCCAATTCCTTCGCTTGAACCCATTCCCGAG
AGTAACAACAGAATGATCAAAACGCTGATCCATAAAGCTGCATTACTCTC
TGAAGAAACGTACCACAGAAAACACAGTGAAGGCAAAACAGTTTATGGCT
TCGTGGAGTACAGATACGACTTCATTGTAGTTGCTTTTAGAGGAACAGAT
ACTTGGGAAGATCGACTTACTGATGCACTGGTCGTTAAAAAGTCTTATAG
CGGTTGTGGTGGATGCCAGGTTCACACTGGGTTTCTGAACTCTTATAGTA
TTGTACGCAAACCAATGCTTGAAAAAGTTGACATTTTAACCAGGAAACAC
CCAAAAGCAAAAATATTGGCCACAGGGCATTCTTTGGGAGGAGCTAAAGC
GGCTCTGGCAGCTTATGAACTTTCAATGAGAGGTTATCTTGTTGATTATG
TAACTTTCGGTTCACCTAGACCTGGAAATGTTATATTTGCTAATAATGTC
AATCGAGCTGTTCGAGGAATGAATCTAAGGGTAACGTTTGGAAGGGATAT
TGCTACAGTCGTTCCACCAAAGAATTCAGGTTATTCACATATCGGCAAAG
AAATACATTTTACAGACCAGAGCACAATGCATGAACTACCTGGCTATGTG
GATTATGCGTATGGTGCTCTACGTAGAAACAGTTTCTGGGATCACAAGAT
GAAAAATGGCTACCGCTGGTTAAGAGACGAGTAAATGAGGTCCATAATAA
TTATTTTGTTGATAATTTTTATCACCGTTTATGGATTGTATGCTGACGAA
TGCTCGTGTGAGAATCCATGTTCTCCTGGTTTCCGATGTACCAGGTGTAA
TGACCGTACTGGTTATGGTTCTAGGTGGTGTAATGGTGAACTCAAATGTC
AACCATGTAGCAAAGGGCGCTACTCAAATAGACCAAATTGCGATAAGCAT
TGTATGGATTGTGAAAAGGGTTATTACAGTGATGTCAGAGGGGCCACGGA
ATGTAAACCATGCCCAGCAGGTCATAGCTGTGACTTTTTTAACAAGCCAA
TAAAATGTCGTAGAGGATACCATAACCCGCAAATTGCAAATCCGCTTGGT
TGTCAGCCTTGTGGAAAAGGTAAATACAGTGATCAAATTGGCGCACTGGA
ATGTAAGACATGCCCTGTTGGGCATTGGTGTCATTCCTGGGTGAATAAAT
ACGCAACACCATGTTACTGGGGACAATACCAAGACGAAGTTGGTCAAACC
ACGTGCAAGATTTGCGAAGCAGGTACCTACACCGACAAAAGGAGGTCTAC
TCGATGTACGCCGTGCGGCTTAGGACAATATCAACCATCGTTCATCTATT
TCGGTAATCAACGCGCAGACTGCAAGAGATGCGGTGAAGGGACGTACAGT
GACGTTGAAGGTGCTGTAAAATGTAAGACATGCCCTAAAGGACATTATTG
TCCAAAGTACTGGGTCAATCATCCCTTGAAGTGCCCACCACGAAAATACC
AAGACCAACCTGGTCGAGTGGCATGTAAATGGTGCAAGCCTGGTACATAC
AATCTGAAAGAAGGCGCATCCAAATGTGAGCTTTGCCCTGCTGGTAGTAA
ATGTATTCATGGTTTTCCCATTATCTGTCATTATAAGTATTACTCTCCAG
AAGGCTCTGATGAATGTCTCAAATGCCCAAGAAAACATTTCTGTCCAATT
CCTTCGCTTGAACCCATTCCCGAGAGTAACAACAGAATGATCAAAACGCT
GATCCATAAAGCTGCATTACTCTCTGAAGAAACGTACCACAGAAAACACA
GTGAAGGCAAAACAGTTTATGGCTTCGTGGAGTACAGATACGACTTCATT
GTAGTTGCTTTTAGAGGAACAGATACTTGGGAAGATCGACTTACTGATGC
ACTGGTCGTTAAAAAGTCTTATAGCGGTTGTGGTGGATGCCAGGTTCACA
CTGGGTTTCTGAACTCTTATAGTATTGTACGCAAACCAATGCTTGAAAAA
GTTGACATTTTAACCAGGAAACACCCAAAAGCAAAAATATTGGCCACAGG
GCATTCTTTGGGAGGAGCTAAAGCGGCTCTGGCAGCTTATGAACTTTCAA
TGAGAGGTTATCTTGTTGATTATGTAACTTTCGGTTCACCTAGACCTGGA
AATGTTATATTTGCTAATAATGTCAATCGAGCTGTTCGAGGAATGAATCT
AAGGGTAACGTTTGGAAGGGATATTGCTACAGTCGTTCCACCAAAGAATT
CAGGTTATTCACATATCGGCAAAGAAATACATTTTACAGACCAGAGCACA
ATGCATGAACTACCTGGCTATGTGGATTATGCGTATGGTGCTCTACGTAG
AAACAGTTTCTGGGATCACAAGATGAAAAATGGCTACCGCTGGTTAAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000228_pilon | genome | sc0000228_pilon:271780..273901 - |
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