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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000228_pilon:271776..273901- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.19671.1.p1 ID=MSTRG.19671.1.p1|Name=MSTRG.19671.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2126bp|location=Sequence derived from alignment at sc0000228_pilon:271776..273901- (Clytia hemisphaerica_ch_hm2_pilon)
TTTTTCCTCCTAAACGATCAAAAAGTAAAATCAAAACCAAAAAGGCAAAA
CGAGTAAATAACATGAGGTCCATAATAATTATTTTGTTGATAATTTTTAT
CACCGTTTATGGATTGTATGCTGACGAATGCTCGTGTGAGAATCCATGTT
CTCCTGGTTTCCGATGTACCAGGTGTAATGACCGTACTGGTTATGGTTCT
AGGTGGTGTAATGGTGAACTCAAATGTCAACCATGTAGCAAAGGGCGCTA
CTCAAATAGACCAAATTGCGATAAGCATTGTATGGATTGTGAAAAGGGTT
ATTACAGTGATGTCAGAGGGGCCACGGAATGTAAACCATGCCCAGCAGGT
CATAGCTGTGACTTTTTTAACAAGCCAATAAAATGTCGTAGAGGATACCA
TAACCCGCAAATTGCAAATCCGCTTGGTTGTCAGCCTTGTGGAAAAGGTA
AATACAGTGATCAAATTGGCGCACTGGAATGTAAGACATGCCCTGTTGGG
CATTGGTGTCATTCCTGGGTGAATAAATACGCAACACCATGTTACTGGGG
ACAATACCAAGACGAAGTTGGTCAAACCACGTGCAAGATTTGCGAAGCAG
GTACCTACACCGACAAAAGGAGGTCTACTCGATGTACGCCGTGCGGCTTA
GGACAATATCAACCATCGTTCATCTATTTCGGTAATCAACGCGCAGACTG
CAAGAGATGCGGTGAAGGGACGTACAGTGACGTTGAAGGTGCTGTAAAAT
GTAAGACATGCCCTAAAGGACATTATTGTCCAAAGTACTGGGTCAATCAT
CCCTTGAAGTGCCCACCACGAAAATACCAAGACCAACCTGGTCGAGTGGC
ATGTAAATGGTGCAAGCCTGGTACATACAATCTGAAAGAAGGCGCATCCA
AATGTGAGCTTTGCCCTGCTGGTAGTAAATGTATTCATGGTTTTCCCATT
ATCTGTCATTATAAGTATTACTCTCCAGAAGGCTCTGATGAATGTCTCAA
ATGCCCAAGAAAACATTTCTGTCCAATTCCTTCGCTTGAACCCATTCCCG
AGAGTAACAACAGAATGATCAAAACGCTGATCCATAAAGCTGCATTACTC
TCTGAAGAAACGTACCACAGAAAACACAGTGAAGGCAAAACAGTTTATGG
CTTCGTGGAGTACAGATACGACTTCATTGTAGTTGCTTTTAGAGGAACAG
ATACTTGGGAAGATCGACTTACTGATGCACTGGTCGTTAAAAAGTCTTAT
AGCGGTTGTGGTGGATGCCAGGTTCACACTGGGTTTCTGAACTCTTATAG
TATTGTACGCAAACCAATGCTTGAAAAAGTTGACATTTTAACCAGGAAAC
ACCCAAAAGCAAAAATATTGGCCACAGGGCATTCTTTGGGAGGAGCTAAA
GCGGCTCTGGCAGCTTATGAACTTTCAATGAGAGGTTATCTTGTTGATTA
TGTAACTTTCGGTTCACCTAGACCTGGAAATGTTATATTTGCTAATAATG
TCAATCGAGCTGTTCGAGGAATGAATCTAAGGGTAACGTTTGGAAGGGAT
ATTGCTACAGTCGTTCCACCAAAGAATTCAGGTTATTCACATATCGGCAA
AGAAATACATTTTACAGACCAGAGCACAATGCATGAACTACCTGGCTATG
TGGATTATGCGTATGGTGCTCTACGTAGAAACAGTTTCTGGGATCACAAG
ATGAAAAATGGCTACCGCTGGTTAAGGTAAGCATCATTGTTTTATGCAGT
CTGGTTTTGACCGATTCGATTTTGCTGTGTGTTATTTTACTACAACATAC
TTTTCATTAAATGTTATCCTTGACTTTAGAGACGAGTAACACATCTAGAG
ATTGAAGAACTGGGTACTGCAATGGCTGATCGCAAGCTTTGGAGGGAGGA
TTATTGTTTGTTCGAACCTAGATTGAAGGATAATGATGATGCTGAATATT
ATAACAATATAATACCTCATTATTTACGACCTATTTCAATGTTTTATGAT
TTTCATGATTTCTTGAATGATTCTTAAGATTACTTTTTTGACTGTTACGA
TTTTAATGAAGAAACTTTTGATGCTTATGTTTATTGACCTAAGAAAATTC
AATAGTTTTTGCTGATGTACACAGGG Coding sequence (CDS) from alignment at sc0000228_pilon:271776..273901- >MSTRG.19671.1.p1 ID=MSTRG.19671.1.p1|Name=MSTRG.19671.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1668bp|location=Sequence derived from alignment at sc0000228_pilon:271776..273901- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAGGTCCATAATAATTATTTTGTTGATAATTTTTATCACCGTTTATGG
ATTGTATGCTGACGAATGCTCGTGTGAGAATCCATGTTCTCCTGGTTTCC
GATGTACCAGGTGTAATGACCGTACTGGTTATGGTTCTAGGTGGTGTAAT
GGTGAACTCAAATGTCAACCATGTAGCAAAGGGCGCTACTCAAATAGACC
AAATTGCGATAAGCATTGTATGGATTGTGAAAAGGGTTATTACAGTGATG
TCAGAGGGGCCACGGAATGTAAACCATGCCCAGCAGGTCATAGCTGTGAC
TTTTTTAACAAGCCAATAAAATGTCGTAGAGGATACCATAACCCGCAAAT
TGCAAATCCGCTTGGTTGTCAGCCTTGTGGAAAAGGTAAATACAGTGATC
AAATTGGCGCACTGGAATGTAAGACATGCCCTGTTGGGCATTGGTGTCAT
TCCTGGGTGAATAAATACGCAACACCATGTTACTGGGGACAATACCAAGA
CGAAGTTGGTCAAACCACGTGCAAGATTTGCGAAGCAGGTACCTACACCG
ACAAAAGGAGGTCTACTCGATGTACGCCGTGCGGCTTAGGACAATATCAA
CCATCGTTCATCTATTTCGGTAATCAACGCGCAGACTGCAAGAGATGCGG
TGAAGGGACGTACAGTGACGTTGAAGGTGCTGTAAAATGTAAGACATGCC
CTAAAGGACATTATTGTCCAAAGTACTGGGTCAATCATCCCTTGAAGTGC
CCACCACGAAAATACCAAGACCAACCTGGTCGAGTGGCATGTAAATGGTG
CAAGCCTGGTACATACAATCTGAAAGAAGGCGCATCCAAATGTGAGCTTT
GCCCTGCTGGTAGTAAATGTATTCATGGTTTTCCCATTATCTGTCATTAT
AAGTATTACTCTCCAGAAGGCTCTGATGAATGTCTCAAATGCCCAAGAAA
ACATTTCTGTCCAATTCCTTCGCTTGAACCCATTCCCGAGAGTAACAACA
GAATGATCAAAACGCTGATCCATAAAGCTGCATTACTCTCTGAAGAAACG
TACCACAGAAAACACAGTGAAGGCAAAACAGTTTATGGCTTCGTGGAGTA
CAGATACGACTTCATTGTAGTTGCTTTTAGAGGAACAGATACTTGGGAAG
ATCGACTTACTGATGCACTGGTCGTTAAAAAGTCTTATAGCGGTTGTGGT
GGATGCCAGGTTCACACTGGGTTTCTGAACTCTTATAGTATTGTACGCAA
ACCAATGCTTGAAAAAGTTGACATTTTAACCAGGAAACACCCAAAAGCAA
AAATATTGGCCACAGGGCATTCTTTGGGAGGAGCTAAAGCGGCTCTGGCA
GCTTATGAACTTTCAATGAGAGGTTATCTTGTTGATTATGTAACTTTCGG
TTCACCTAGACCTGGAAATGTTATATTTGCTAATAATGTCAATCGAGCTG
TTCGAGGAATGAATCTAAGGGTAACGTTTGGAAGGGATATTGCTACAGTC
GTTCCACCAAAGAATTCAGGTTATTCACATATCGGCAAAGAAATACATTT
TACAGACCAGAGCACAATGCATGAACTACCTGGCTATGTGGATTATGCGT
ATGGTGCTCTACGTAGAAACAGTTTCTGGGATCACAAGATGAAAAATGGC
TACCGCTGGTTAAGGTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000228_pilon | genome | sc0000228_pilon:271776..273901 - |
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