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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000228_pilon:229530..233291+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.19670.2.p1 ID=MSTRG.19670.2.p1|Name=MSTRG.19670.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3762bp|location=Sequence derived from alignment at sc0000228_pilon:229530..233291+ (Clytia hemisphaerica_ch_hm2_pilon)
agaATTTAAATGAAAGAATAGTTATGCTATCCGACATACTTACCATCACA
GATGGTGCAATTAATTCTGTCATAGTAAAAGATCAAGTTTTGGATGCAAA
TATTTCATCGACATCCAATACTGATTCTTTGAACTCTCAAATAAAGGTAA
ATATGTGTGAAGAATTGGTTACCATTAATTGTTTAGAATGGATTAATAAA
CTTTATGGGGAATTCCTTTGGAATAATTGATATAATTATGATATAATTAC
GATCTGCAGCAGAAACTTAATAAAGGTATTCAAGAGTGTAATATTACCAA
ATAgacaaaacagaaaatgaacatgaaaaatgactaaggTTACTTACATA
AGTGTTGGGCAGCGTATGTAAACTATTtagtttcatttatttttccttGT
TATAGAATGTCAGTACAGATGGCAGctcaaaagaaattgaaaaagaaagt
gaatcGTTAAATTCTTTACGATCTTCCCTGGACTTCGAAAATCCCAACAG
AAAGCTACTACCTATTGCTCCAATTGGTATATTTTCCTTattattttgtt
tgatatcAGAGTATACTATGTACAGTGTATGTTTCCTGAGACaagcatga
aaatttcatcatatGAATTAATCCAACCAAAGGCAAATTTTATATTAAAG
CAagagtttaaaatattttgagactCTTTAACTGTAATTCTAATGTCATC
TGATGCCATgagtattatttttattttcagataaTGTTAAAAGCAAAGTG
CTAGTTGTTGAAAAGGACATGATGCAGGTAACTTATTATTATTCTCctct
tttctttcagttttattcCACTGATAATGTTTCTGAGTCAGAACCATTCT
TAAAATGCCAGAATATCAGCGTTTTTTCAATTTCTACGCAGGTACCTCGG
AAATCAAACGATACACCGTGTTTCAAAGGGATTGCTTTCAACACAAAAAC
ATTCCATATACCTGATGGTTAGTTTagattggtcaatttttcaaattctg
gtTAATCAAATCAACTTTTTCCTAGCTTCAATCACTAATTCTAAGGGGGT
GGTTACACGTACAGTTTGCCAAAGTGAAGTGAAGTGAAATCACTTCGGTC
AATACACATACCTCAAATGTGCAGTGAAGTGAAACTCTGAAGTAATTTCA
GTTCGGcgtgaaaaaagcaaaaatcaatGTGTAACTCAGAATATTGTAAA
TTGAACAGAAACcctatttctaatttttgatTGGGATTATTAATTTTCAT
CATTCTTTCGTTAAAAAAGTGCTTTAGTTCACTTTCTTCATAGATTTAGA
Gcctttgaaacataaaaatatcgattttaatttttacctttttttttttt
tttttttttcatcattaatttcttgatctccaaaagtatattggttcttc
ttacaagaaattgaaatattttatgtttatgtaatgtatataaaattcta
cGATTCAAACTGATACGAAGTGGACAGCTATGTCAGTAATGGAAGCTTGG
CTACATAGTATTGAAATAGTAAATCAATGGGCAACCTAATATAGAAGACG
CTGAAAGATAGGTTCGTCGGATAAGATGCCTGATACCTGAAGTGAGGGTG
AAGTGAAGGCGACGTGTAAACAACCTGAAGTAAAGTGAAGTCTTGCTTCG
CCTGCGTGTAACCAGCCCCTAATATCAACTATCAAGACCTTTAGGTTTtc
ttaaaacttaaaactccATAGCTGATGTAAGCATTCAGCAAAATGTAAGC
ATAGTAGTATGAAAAGGGTTGTCTTTgtgagaaataaaaattatttatct
TGTTAACTAGATAATGATGTCATTGCGGAGAGGTACAGCACAGGTGCCAA
GAAAAGGTtaattggagaaaaaatgaaatccaagtaatttttataaaata
actatAACAGCTCGTTAATTTTTAAACCCTTTCTTGAGAGCTGCTTTTAT
CCTGTGGATGGGAGAGCTTGACTAGTATCTCTGACTATAATTTAGATCCA
AATAAAATGCGATTCCATCACACTATAATTTTCTGTTATAGTAGGGGGCC
GAAGCCTTGGGTTCCATGACATCTTTTCTACAACCTAgccggctgtattt
ctttgtgtgttttagtcagagagttgttgtaatacaattttttgctcaga
acttcatgctctatcagatggtaccaatcattttcgtttattttgacttt
tgaaaataagctttttctctaccccttattttcccttgcagttttgccta
tggcgtcactattttggtcataaaaagttttcccgggcctaatccgcgtc
ctccctctcaaaaatatcttgtaatatactgttctttggaatagactaaa
agtggctaggtcgtagaaaagatgtcacagAACCCAAGGCTTGGCCCCCT
ACTATTAATATCCCCAATAGAATTGACCTATAATGAGAGCATTTTTGTTT
GTGTATTTGAATGTTTGTGTGTTTAATTTTAGGAAAAGCGCTTCTTACAA
ACACCCAAAGATAGTTGAACCAACCATTATCAATTCAAAGAAACAAAGGG
ACACACCAAAAAGTCAAGATAATTCTTCTTCACCAGAACATGAAACAAAG
AACCCTCTAGCCCCTTATCTGCAGGTAAGTAGCATTTCAGATTACCAGTT
AAGATAGAGAGAGTATATCAGCATGCTActctaacaccctgcctggGAGA
GATCGAGATTCAAACACAGTCTGACATTGCCAGTCTGTGATTTAAACCTT
GACACTAAATCAGCAGAATGTTAGTGAGGTGCACAGTAATAGCCTAACCA
GATGGCGAATCCATCTACATTTGCGATTTTGAGCTCTGCTAAGCCTTTGA
CACTACTTTGAGAGAGAGAGTGATATATCAGTGAAGGTAGAGAGAGTCCG
TCATCCTGACAGGAAGTGATCCTATCTTACTGTTTAGTGCTGGTATcaac
aatatttcattttgccaaatttttgacattcaaGATTAAAGGAACCCTTT
TTCCAGACGAATGAAAAGGCTATTTCTaattttatcaatgttttctCAGT
TGCAGGATGTTTTGGAGAATAAAATAGCCAGTCTGGTATCTACCTTGAAA
TATGCCGATTCTGCAGAAAAGGAATTTTTGAAGAACAAAGCTTTGGACAT
GAATTCAAAGGATGATGCAATGCTGGAGGCGTTGAACTCTGTTGCTCACA
ATCTGAAGGAGATGAAGATGAACGTATGCTGTAATGTAAGAAccatatta
tattatttttcttgaCCTTTTAAAAAGGGATTTAGCCAAGCTATATTGCG
ACTGTTGGCCTGAAGATTCCCCAATGGGATATCGAGAGGAAAGTTTCATG
ATATTTTACTATTGTCTACTTCGAAATTTAATCAACATATATTGTTACAA
AGATGTTGAATtgaatttatataatttttccttttgaaTATTAAACAATT
GCCTTAAAAGATATCCTTATCATTTTGGACAAAACTGTTTAGAAATTATT
TTCCCAGAACCATTGGCCAAACGATCTGATTCTAAGCGTAACACCCCAGA
TATTTCTCAGGCACACATTTAAACCTAAATCTCAGATCTTGTCACACCTT
TACTTTAGTTTCCACCAGCAAACAGTCTCTTGACATTTCGAATCTGCAAA
TAGCTTCTTTTACCAATGGCGAACAAGTGATAAATCTAAACACCCATTTA
GAGGCGAGTCTGATTGGTTTCAATGTATATTTGATAGTGAAAAGAATAAC
CAGAAGCGTCAt Coding sequence (CDS) from alignment at sc0000228_pilon:229530..233291+ >MSTRG.19670.2.p1 ID=MSTRG.19670.2.p1|Name=MSTRG.19670.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=6504bp|location=Sequence derived from alignment at sc0000228_pilon:229530..233291+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGCTATCCGACATACTTACCATCACAGATGGTGCAATTAATTCTGTCAT
AGTAAAAGATCAAGTTTTGGATGCAAATATTTCATCGACATCCAATACTG
ATTCTTTGAACTCTCAAATAAAGAATGTCAGTACAGATGGCAGctcaaaa
gaaattgaaaaagaaagtgaatcGTTAAATTCTTTACGATCTTCCCTGGA
CTTCGAAAATCCCAACAGAAAGCTACTACCTATTGCTCCAATTGataaTG
TTAAAAGCAAAGTGCTAGTTGTTGAAAAGGACATGATGCAGGTACCTCGG
AAATCAAACGATACACCGTGTTTCAAAGGGATTGCTTTCAACACAAAAAC
ATTCCATATACCTGATGATAATGATGTCATTGCGGAGAGGTACAGCACAG
GTGCCAAGAAAAGGTtaattggagaaaaaatgaaatccaaGAAAAGCGCT
TCTTACAAACACCCAAAGATAGTTGAACCAACCATTATCAATTCAAAGAA
ACAAAGGGACACACCAAAAAGTCAAGATAATTCTTCTTCACCAGAACATG
AAACAAAGAACCCTCTAGCCCCTTATCTGCAGTTGCAGGATGTTTTGGAG
AATAAAATAGCCAGTCTGGTATCTACCTTGAAATATGCCGATTCTGCAGA
AAAGGAATTTTTGAAGAACAAAGCTTTGGACATGAATTCAAAGGATGATG
CAATGCTGGAGGCGTTGAACTCTGTTGCTCACAATCTGAAGGAGATGAAG
ATGAACGTATGCTGTAATTTTCCACCAGCAAACAGTCTCTTGACATTTCG
AATCTGCAAATAGATGCTATCCGACATACTTACCATCACAGATGGTGCAA
TTAATTCTGTCATAGTAAAAGATCAAGTTTTGGATGCAAATATTTCATCG
ACATCCAATACTGATTCTTTGAACTCTCAAATAAAGAATGTCAGTACAGA
TGGCAGctcaaaagaaattgaaaaagaaagtgaatcGTTAAATTCTTTAC
GATCTTCCCTGGACTTCGAAAATCCCAACAGAAAGCTACTACCTATTGCT
CCAATTGataaTGTTAAAAGCAAAGTGCTAGTTGTTGAAAAGGACATGAT
GCAGGTACCTCGGAAATCAAACGATACACCGTGTTTCAAAGGGATTGCTT
TCAACACAAAAACATTCCATATACCTGATGATAATGATGTCATTGCGGAG
AGGTACAGCACAGGTGCCAAGAAAAGGTtaattggagaaaaaatgaaatc
caaGAAAAGCGCTTCTTACAAACACCCAAAGATAGTTGAACCAACCATTA
TCAATTCAAAGAAACAAAGGGACACACCAAAAAGTCAAGATAATTCTTCT
TCACCAGAACATGAAACAAAGAACCCTCTAGCCCCTTATCTGCAGTTGCA
GGATGTTTTGGAGAATAAAATAGCCAGTCTGGTATCTACCTTGAAATATG
CCGATTCTGCAGAAAAGGAATTTTTGAAGAACAAAGCTTTGGACATGAAT
TCAAAGGATGATGCAATGCTGGAGGCGTTGAACTCTGTTGCTCACAATCT
GAAGGAGATGAAGATGAACGTATGCTGTAATTTTCCACCAGCAAACAGTC
TCTTGACATTTCGAATCTGCAAATAGATGCTATCCGACATACTTACCATC
ACAGATGGTGCAATTAATTCTGTCATAGTAAAAGATCAAGTTTTGGATGC
AAATATTTCATCGACATCCAATACTGATTCTTTGAACTCTCAAATAAAGA
ATGTCAGTACAGATGGCAGctcaaaagaaattgaaaaagaaagtgaatcG
TTAAATTCTTTACGATCTTCCCTGGACTTCGAAAATCCCAACAGAAAGCT
ACTACCTATTGCTCCAATTGataaTGTTAAAAGCAAAGTGCTAGTTGTTG
AAAAGGACATGATGCAGGTACCTCGGAAATCAAACGATACACCGTGTTTC
AAAGGGATTGCTTTCAACACAAAAACATTCCATATACCTGATGATAATGA
TGTCATTGCGGAGAGGTACAGCACAGGTGCCAAGAAAAGGTtaattggag
aaaaaatgaaatccaaGAAAAGCGCTTCTTACAAACACCCAAAGATAGTT
GAACCAACCATTATCAATTCAAAGAAACAAAGGGACACACCAAAAAGTCA
AGATAATTCTTCTTCACCAGAACATGAAACAAAGAACCCTCTAGCCCCTT
ATCTGCAGTTGCAGGATGTTTTGGAGAATAAAATAGCCAGTCTGGTATCT
ACCTTGAAATATGCCGATTCTGCAGAAAAGGAATTTTTGAAGAACAAAGC
TTTGGACATGAATTCAAAGGATGATGCAATGCTGGAGGCGTTGAACTCTG
TTGCTCACAATCTGAAGGAGATGAAGATGAACGTATGCTGTAATTTTCCA
CCAGCAAACAGTCTCTTGACATTTCGAATCTGCAAATAGATGCTATCCGA
CATACTTACCATCACAGATGGTGCAATTAATTCTGTCATAGTAAAAGATC
AAGTTTTGGATGCAAATATTTCATCGACATCCAATACTGATTCTTTGAAC
TCTCAAATAAAGAATGTCAGTACAGATGGCAGctcaaaagaaattgaaaa
agaaagtgaatcGTTAAATTCTTTACGATCTTCCCTGGACTTCGAAAATC
CCAACAGAAAGCTACTACCTATTGCTCCAATTGataaTGTTAAAAGCAAA
GTGCTAGTTGTTGAAAAGGACATGATGCAGGTACCTCGGAAATCAAACGA
TACACCGTGTTTCAAAGGGATTGCTTTCAACACAAAAACATTCCATATAC
CTGATGATAATGATGTCATTGCGGAGAGGTACAGCACAGGTGCCAAGAAA
AGGTtaattggagaaaaaatgaaatccaaGAAAAGCGCTTCTTACAAACA
CCCAAAGATAGTTGAACCAACCATTATCAATTCAAAGAAACAAAGGGACA
CACCAAAAAGTCAAGATAATTCTTCTTCACCAGAACATGAAACAAAGAAC
CCTCTAGCCCCTTATCTGCAGTTGCAGGATGTTTTGGAGAATAAAATAGC
CAGTCTGGTATCTACCTTGAAATATGCCGATTCTGCAGAAAAGGAATTTT
TGAAGAACAAAGCTTTGGACATGAATTCAAAGGATGATGCAATGCTGGAG
GCGTTGAACTCTGTTGCTCACAATCTGAAGGAGATGAAGATGAACGTATG
CTGTAATTTTCCACCAGCAAACAGTCTCTTGACATTTCGAATCTGCAAAT
AGATGCTATCCGACATACTTACCATCACAGATGGTGCAATTAATTCTGTC
ATAGTAAAAGATCAAGTTTTGGATGCAAATATTTCATCGACATCCAATAC
TGATTCTTTGAACTCTCAAATAAAGAATGTCAGTACAGATGGCAGctcaa
aagaaattgaaaaagaaagtgaatcGTTAAATTCTTTACGATCTTCCCTG
GACTTCGAAAATCCCAACAGAAAGCTACTACCTATTGCTCCAATTGataa
TGTTAAAAGCAAAGTGCTAGTTGTTGAAAAGGACATGATGCAGGTACCTC
GGAAATCAAACGATACACCGTGTTTCAAAGGGATTGCTTTCAACACAAAA
ACATTCCATATACCTGATGATAATGATGTCATTGCGGAGAGGTACAGCAC
AGGTGCCAAGAAAAGGTtaattggagaaaaaatgaaatccaaGAAAAGCG
CTTCTTACAAACACCCAAAGATAGTTGAACCAACCATTATCAATTCAAAG
AAACAAAGGGACACACCAAAAAGTCAAGATAATTCTTCTTCACCAGAACA
TGAAACAAAGAACCCTCTAGCCCCTTATCTGCAGTTGCAGGATGTTTTGG
AGAATAAAATAGCCAGTCTGGTATCTACCTTGAAATATGCCGATTCTGCA
GAAAAGGAATTTTTGAAGAACAAAGCTTTGGACATGAATTCAAAGGATGA
TGCAATGCTGGAGGCGTTGAACTCTGTTGCTCACAATCTGAAGGAGATGA
AGATGAACGTATGCTGTAATTTTCCACCAGCAAACAGTCTCTTGACATTT
CGAATCTGCAAATAGATGCTATCCGACATACTTACCATCACAGATGGTGC
AATTAATTCTGTCATAGTAAAAGATCAAGTTTTGGATGCAAATATTTCAT
CGACATCCAATACTGATTCTTTGAACTCTCAAATAAAGAATGTCAGTACA
GATGGCAGctcaaaagaaattgaaaaagaaagtgaatcGTTAAATTCTTT
ACGATCTTCCCTGGACTTCGAAAATCCCAACAGAAAGCTACTACCTATTG
CTCCAATTGataaTGTTAAAAGCAAAGTGCTAGTTGTTGAAAAGGACATG
ATGCAGGTACCTCGGAAATCAAACGATACACCGTGTTTCAAAGGGATTGC
TTTCAACACAAAAACATTCCATATACCTGATGATAATGATGTCATTGCGG
AGAGGTACAGCACAGGTGCCAAGAAAAGGTtaattggagaaaaaatgaaa
tccaaGAAAAGCGCTTCTTACAAACACCCAAAGATAGTTGAACCAACCAT
TATCAATTCAAAGAAACAAAGGGACACACCAAAAAGTCAAGATAATTCTT
CTTCACCAGAACATGAAACAAAGAACCCTCTAGCCCCTTATCTGCAGTTG
CAGGATGTTTTGGAGAATAAAATAGCCAGTCTGGTATCTACCTTGAAATA
TGCCGATTCTGCAGAAAAGGAATTTTTGAAGAACAAAGCTTTGGACATGA
ATTCAAAGGATGATGCAATGCTGGAGGCGTTGAACTCTGTTGCTCACAAT
CTGAAGGAGATGAAGATGAACGTATGCTGTAATTTTCCACCAGCAAACAG
TCTCTTGACATTTCGAATCTGCAAATAGATGCTATCCGACATACTTACCA
TCACAGATGGTGCAATTAATTCTGTCATAGTAAAAGATCAAGTTTTGGAT
GCAAATATTTCATCGACATCCAATACTGATTCTTTGAACTCTCAAATAAA
GAATGTCAGTACAGATGGCAGctcaaaagaaattgaaaaagaaagtgaat
cGTTAAATTCTTTACGATCTTCCCTGGACTTCGAAAATCCCAACAGAAAG
CTACTACCTATTGCTCCAATTGataaTGTTAAAAGCAAAGTGCTAGTTGT
TGAAAAGGACATGATGCAGGTACCTCGGAAATCAAACGATACACCGTGTT
TCAAAGGGATTGCTTTCAACACAAAAACATTCCATATACCTGATGATAAT
GATGTCATTGCGGAGAGGTACAGCACAGGTGCCAAGAAAAGGTtaattgg
agaaaaaatgaaatccaaGAAAAGCGCTTCTTACAAACACCCAAAGATAG
TTGAACCAACCATTATCAATTCAAAGAAACAAAGGGACACACCAAAAAGT
CAAGATAATTCTTCTTCACCAGAACATGAAACAAAGAACCCTCTAGCCCC
TTATCTGCAGTTGCAGGATGTTTTGGAGAATAAAATAGCCAGTCTGGTAT
CTACCTTGAAATATGCCGATTCTGCAGAAAAGGAATTTTTGAAGAACAAA
GCTTTGGACATGAATTCAAAGGATGATGCAATGCTGGAGGCGTTGAACTC
TGTTGCTCACAATCTGAAGGAGATGAAGATGAACGTATGCTGTAATTTTC
CACCAGCAAACAGTCTCTTGACATTTCGAATCTGCAAATAGATGCTATCC
GACATACTTACCATCACAGATGGTGCAATTAATTCTGTCATAGTAAAAGA
TCAAGTTTTGGATGCAAATATTTCATCGACATCCAATACTGATTCTTTGA
ACTCTCAAATAAAGAATGTCAGTACAGATGGCAGctcaaaagaaattgaa
aaagaaagtgaatcGTTAAATTCTTTACGATCTTCCCTGGACTTCGAAAA
TCCCAACAGAAAGCTACTACCTATTGCTCCAATTGataaTGTTAAAAGCA
AAGTGCTAGTTGTTGAAAAGGACATGATGCAGGTACCTCGGAAATCAAAC
GATACACCGTGTTTCAAAGGGATTGCTTTCAACACAAAAACATTCCATAT
ACCTGATGATAATGATGTCATTGCGGAGAGGTACAGCACAGGTGCCAAGA
AAAGGTtaattggagaaaaaatgaaatccaaGAAAAGCGCTTCTTACAAA
CACCCAAAGATAGTTGAACCAACCATTATCAATTCAAAGAAACAAAGGGA
CACACCAAAAAGTCAAGATAATTCTTCTTCACCAGAACATGAAACAAAGA
ACCCTCTAGCCCCTTATCTGCAGTTGCAGGATGTTTTGGAGAATAAAATA
GCCAGTCTGGTATCTACCTTGAAATATGCCGATTCTGCAGAAAAGGAATT
TTTGAAGAACAAAGCTTTGGACATGAATTCAAAGGATGATGCAATGCTGG
AGGCGTTGAACTCTGTTGCTCACAATCTGAAGGAGATGAAGATGAACGTA
TGCTGTAATTTTCCACCAGCAAACAGTCTCTTGACATTTCGAATCTGCAA
ATAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000228_pilon | genome | sc0000228_pilon:229530..233291 + |
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