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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000228_pilon:63060..69953- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.19656.1.p1 ID=MSTRG.19656.1.p1|Name=MSTRG.19656.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=6894bp|location=Sequence derived from alignment at sc0000228_pilon:63060..69953- (Clytia hemisphaerica_ch_hm2_pilon)
ACATTTCTTATTGTGATCAATTCTGATCCTTTGTATTAATAAAGGGAAAT
TCCTAGAAAAAATACCAAAAGTCTTGATTAGTTTAGTCCTTATAGTGAAA
TCTTTTGGTGTAAACACTTTTCAAACTAAACTGAAATCTCTGATATAATT
TCTTTGTCAAGACGATGATGATATATTTCTGAGTACAAGATGTTTGAAAA
ATATCGTTCAATATCGATTTTGATTTTATTTTGGTGCATTTTTTACTTGA
CATCAAGTACTCAATGTGCATTGACATGTCATGGTAAGTTTTTTTTAAAT
TGCATTAATAATATTATTGATAATTTGGGTGTGAGACCCAAACTAGAAAT
GAAACATAAAATATATTATTGCAAATTTTTTTGGGGTTGAGTCTTTACTT
GGCCTTAACAATAAAATTGTTTTGTTTTACGATGGTCTCAGAAGAAATAG
TCAAAGTGAATAATTGCTTCGTTACAATAAAATGCAAAAGCCAAGATTCA
AGATTGCTTATATTCTATGAAAAACCAAGATTCATAGTTGTAAGACAAAA
ACTGAAAATACTGCAAAACGTAAATTGTTACGTTTATTGCCCGGGGGGGG
GGGGGGTACTTAGGCAAAAATGGATGATGGGTATGTGCGGACGGTAAGGG
TCGGTTTTCTCACCTTTCAAAGTCTCTCTAAGGGTCGGAAAAATCAGAAA
GTTTTAAATTAGTCTCTCTAAGGGTCGGAAAATTCAGGATTTTTAGGACA
TTTTTTTATTTCCAGATAAAAAATTGTAATAAAGTCTCTCTAAGGGTATG
ACTTTTTTCAAAAATCAAAAAAAAATTGTAATAAAGTCTCTCTAAGGGTA
TGACTTTTTTCAAAAATCGAAAAAAAAATTCAAAAAGTCTCTCTAAGGGT
CACCTTTTCAGGAAAAATCAGTCTCTCTAAGGGTCAGTTTTCGGAGGTCC
CGTCCGCACATACCCCTCATTCGCTAACCCTAGTACTCCCCCCAGGGTTT
ATTGTCATCATGAACATGTTGTCATAAACTCTTTTCTGTGACCTGCCGAA
AATCTTATTCCAAATTTATATCATAAAGTCGAAAAGCATTGTAGTGATTT
TTAGGGGGTTATAGTTTTATGTGGGCCTCTTCAAAAGGGAGGGGGGCGTC
CGGTATGAACCATTCTCTTTTTTGCAGACCATACTTATGAACATTAGAAC
AACTTTAAACAGACCAAATCAAACCACAAAAACTGTTTTTCTCCCCAATT
TAATAACGTTGTACTAACGCACTTTATAATAAAAACTGACACACTTTGTA
ATATAATCGACCTACCACAATTTGTAATAAAAATCGACGTACTTTGTAAT
ACGAAAAGCTGACACACTTTGTAATAATTTATGAATTTAAATGCCAATTG
GTAAAAAGCCCTGTAAATTTTCTTCGTCGCCCACACATATTTTCCAAAAA
ATTGGACCCTCTCTCTCCAAATGACTAGTCGGGACCCATCCTGTTAGCAT
TAGCCGTCAGTGGAATCTTAGAGAATTTTGGCGTAGTATCTTAGGGCCGG
CTTAGGGCTCATAGGCGTTAGGCCAAAATATTCATTCAAAGAAATATGTT
GTTACTTTTGACTTGCTATTTTTGATTCACGTGTTTTAAATTATGTAATA
AGCTGGTTTAACTTCGACAAATGGAAGTGTTTAATCCAGGGTTCCTCTGG
GCCATAAGCGCTGTGGGGCATTCATAGCTAGGGCTACAGGCTGTTTTATA
AAAACATCCAAAATTTTTGAAAACTTCGGATGTTTTAAGCTTTTCGAATT
TTAGGCCTGAAAATGTTCTTAACATGTTTTTATTTTCACCAGTATTTAGG
GTGTTTTAGAGTCCGCACAAAGCCTTGTAACTTGTTTTTAATATCTTGGC
CATCGAACTTATGTTCTTATAATAATATAGCTTGTTCTATTCTAAATAAA
ACGTGTATATCATGGATACCTTGGTGCAAAAATATACATTCCAAAAATGG
CGACGTAACCTATATATCTTTCTATTTTTTTCATCTTTATAGACCGATTT
GAGGCTTCAACCAATAAGACAATGTATTTATCGGAATACGGGCATGACCC
TGGTAACAATTGTGAAAACGAAACTACACCATGTCAAACCCTGCTTCATG
TTTTCACAGCCTTCCCTTACGAAGTTGATATGAACCTTAAACTTGTAATC
GATGGTAACCAAACTGTACCATACTTTAATAATGTCACTATCTTCATCAA
CCCAAAGATACGCACTTTAACATTAGTGCAGCAACAAGGGTCGCCATCAA
ATCCAATTATCGCTAGCAATAGGGGAGCGCAACCAATGTTTGGCTTCACT
CATCCACCTTGTCTTTATATAGATGGTATCAATTTCAAGAAATTGACAAT
CTTGCGATTCTCTGGTTCAAACAGTAGTGGTGATATCAATTTAAGTAACT
CAAAGTGGACAGACGTTTCTGGGGACTACAAAGAGGATATCTCGTATATC
GACGGAGGTAGTGGTGAAGTTCAATTTAATGTCAAGGTGACTTTAAACAA
TGTACTACTTGATCATGGGATGAGTGATGTGGTTCCTTTAGTGCCCATAG
CAACTGGACCAGAATATAAAGTTTATTGGGATGTCACTGCAACATCCACC
GAATTTTACTCATTACATTTACAATTGAATGATCGAGGTACGTTGACTTT
GATTGACTGTTCAGTTACAGGGTTTTTAACTCGGAAAAACTATGCTATTG
ATCTTCAAAATTTCGATCGATTTTATGCTCGTAATATAATGTGTGGGGAA
ATTGGCGATTCTTGCGGAATTGGGAGCTTGGGATTTATGAAAATGGACAA
GATTGGTGAAGTTGACCATAACCGACACTTCAGCTCCATTCCAAGAGGTG
ATGGGCGCACAAATAATTGCTGCTTCTCATATCGGTAACCTGACTATATC
GAATTCTATTTTCAACAAACTCTGGTGTTATTCTGGTGTTTTTGTTTTTG
CTCATGTCAGCACATTTACGTTCAAAGGTAACAAAATCTCATCTATGAAT
TATTCCAGTAAAAACGGGACCTTGTTGTGGTTGAGAAATATTAACAATAC
CGTTATGCACAATAATATTTTTGAAAATGTTCAGTCACCAACTCTAAAAT
GTACAACCTGTAACAAAATTTCAATGACAGTAACTCATTTCACAAACTCT
TATCGACCCATTGTCGTCATGGATTTCCAATTAATTTACCTTCATTCGTG
TAATTTCTTCAATAACACAGCTGGTCGCGGTGGCGGAATGTCGGTTAACG
GTAAAGGGCAATTGATTTTACATAACTGTAACTTTACGGACAACAAAGCA
ACAAACATAACTCAAAATGACGAGTCAGGTTTCCAGGCTGGTGCGATAGA
TAGCCAAGGAGTGAGTGTCAAAATTTATGATTCGGTTTTCGTAAGAAATA
ACGCAGAGACATGCGGAACTTTCCGTATTACAGGAACTTCAAAGAAAACA
GTTTTTTTGTCTAATGTGAACATTACAACACCTGATAGAAATCTACCAAA
ATTTGCCACTGCGTTTGAGATCAACGGACCAACTCTCACAGCGAAAAATT
TACACGTCATTGTTCAAGCAACGGAAGGTTATATTGACATTTTCAACACA
GAGTTGAGCAAATCTGTATCAGCCTTGAAATTTGAATGTCCTAAGAACGC
AAAAGTGAACAACGCCCAAGAGATTTTCTTAAGTTGTGAACATTGTCCGA
AAGACAAATACACTGAACAGGCCGGATTTATGCATTTTAACAACTCTAAA
TCACATATAGAGCCATTTCAATGCCGTCCATGTCCTTACGGGGGTCAATG
TACAGGAATGAAACGAATATCCAGTCGACCGAACTTTTGGGGTTTTGTGC
AAAATGAAATCGTCAAATTCATTCAGTGTAAGTCAGGTTACTGTTGTGGA
GTAGGTGACAAATGTGCCGGTATCGATAGTTGTGCTAATGGACGTACTGG
TCCGGTTTGCGGCCAATGCCATGACAACCATTACGTAAACTTCTTTGACA
GTAAATGTATACCAAATGAAGAATGTACTCATCAGATTTTGACATGGGTA
TTATTCGGTATTGCTGCTTTTTTGTTATTCATCCTGGTGGCATATTTTCA
AGACCTCTGGAATTTGTTCCCATGCTGTAGAGTTCTATGCCGAAGCTGTA
AGGAAAATAGCGATACGTGCGACGAAGATGAACAAATCATAGCAACTGAA
ACTCCCCGATCTTCCCGACCGTCTTCTTCAGGATCAACCTCACCGACAGG
ATCAGAGTCGTTTCAATCTGCTCTGTCACATCCAGATGTATCTTCTGAAA
ACGAACCACTCATACATAACGAATTCAATCCAGATGACATTCAGACAGCA
GAATTAGATGAAGAAGTTTCATCACAACCCAATGAATCTACACCAACATC
CGAGCAAAAAGAAAAGGAAAAAGCCGGTACTTGCACTGTCTTTTTCGGAA
TGATCAAAATCTTGTTCAACTTTTATCAGATCAAACTTCTGATCGATATT
GAAAAACCTTCAGATCACATGACCACGAAAAATGACTGGTGGCGTCATCT
TTTGTCTTCCATATTTACAATTCAAGTAAATTTCGAGGATTTTTCGAGCT
CATATTGTTTCTTTCATGGAATGGATGACATGCATAAACTCTTTATCCAC
AAAGTGTTAATTTATCCAGTTGTTATCTTGCTTGCTATTCTCTTAATGGT
CCTCTACCACTACATTTTCCGACACGTTCCCTTGACGGCATGCTGTCAAC
CAAACGAAGATTCCATTCCGTTTGTCATGCGTTGCAAAAAGTTCATCCTT
CGAATCGTTTTGATCGGGTACACAAGCATCGTGACCTTTTTGTTGGTGAT
GACGTCATGGACGTTCGTACAAAATGATGAACTGGTCCTTCTCGTCAAAG
GAGATGCTGCATATTTCAATAATTGGACTATAACTTGTATGGTATTCTTG
GTTTTATGGGCTGCTCCTTTCCCGTTCAACGTTTATTTCACCACACGCTG
GCTTCAAAACAAAGAGATCACAATCAATAAGTTTCTCATCTGCTTCTTGT
TTCCACCGTTCTCTGTCATCTTTTATCTATGGAAACGTTTCTCCAGAGAA
ACAGACGATATAGTTGAGCCAGACGCGAAAATTTTATTGTCTATGTACGA
GGCACCGTTTCGTCGACGAATGAGCAAAAAAGAAGAACCGATCTTACTTT
GGGATGGAGTTGTGGCTGGCCGACGTCTAATAATCGCCTTAGTGTGCGTT
TACTGGCAAAACTACATCTTTCGTATGGTAACAGTGCTACCCGTTCTCTT
GTTATGCCTATGGCATCATTCACATTACAGGCCTTACAAATCAGATCGAA
TGAATCACTTAGAAAGTGGATCCTTTGTCTTGCTGTCAACAATGGTTGGA
ATCAATCTCGTTTGGTCATTTTTCTACGTTTATTCCCTACCATACCAATA
TCCAATGGATGCTTTTGGTAATACTGTGAAAGTGATTGAAGTGTTTATGG
GTTGGTTACCTTTTCTGTTTTTCTTTTGTTATTATTTTTGGAATGTAATG
AAATTAGGCTGGAAAGGTGGTAAATTTGTGTTTTGGTTAATTGCTGACTT
ATGTGTCAGAGCAATACAATCATGTTTCTAAAGTAAAATACCAACATTTC
TTGAACTTTCGTTTGTTTGAAATATTTCAAAATAGGGATTTTAGCTGAGA
TAATTGACTTTTTATGATTCTTAAAAGATTCTTTGATTGTCAAATCATTA
TTTGAACGATATTTTATTCTGAGCTTAGAATATCATTGTTTTACGAGCTG
TAGTTTAATTAGTAGGATTTGAATATTTGCAATTCAAACTAAAAAAGTTA
ACTGTGAAAACCCAAGTCATTCATGCTCTCAATAACTTAGTCACGTTAAA
TTTTTGAAGCCTGATCTGAAAAGTTTTACTCCTGTATTTACATTACATTC
ATGTTCGAGACCATATGGCCAGACGTCACGAGTTTTTTTTTTCGCTCAGG
TATAGCATTTGCTAAGGTTGGAAAGTGTTTGTATTGGTTTGGGAACAATA
AAACGGAGCAAGAAAATAGAACGTTTTGTTCCGGTTCGGTGATAAAAACA
TATGAAATAAAACGAAAACATGTCAACCCGGTGTGCGGGATTTGTTCCGG
AAATGTGTCGTTTTTTTAGCCGTAGCATCCTGAACATGGTCTTCTTATCG
CATTTTAAGGATAGCTTTTAATTTTTAAATGAAAACCTTTTTTTTAAATA
GAGTATGATATATATCAAAGATATTTTTATTTCATAAATTTTTATTTTCT
GTTTACTGTGAAAGTAGCTGACTATAGAAATACAATCAAAGTCAGAATAT
TTGAGAAAAAAGGAAAATTCCCACGAAATCTTTCAACCACAAACAATTTG
GAAGCGCTCTAAATTAGGTTGAAAGGATAGAGTTTTAACTCTGAGTTTTA
ACGCCAGGACCTTAGGATCTGAGGATCCAAAAGTCCAAGAATGGTCCAAT
AGGGCTCAGAATGTAGCCTGGAAGTCTATAAACCCATCCCAAATTGAAAT
ATTCGAATAAATTTATCAATTAACCCAAAAGCGACTTTCTCGCCCGAACT
TTAAATTGCTAAAAATTAAAAATTAATCAAAACTCTCAATATATTTTGAC
CAAGATTGTAGTTCAAGATACCATAATTTTATAAAGAGTAAAGCGTTCGT
ATTAGTAGAACCACTTAATCAAATATCTTAACCTTTCGAGAAGCTGAACA
ATTTCTTATGTATTATCCTATCTCATAGTTATCAAATACATGCTTAAGCC
TCTACAACAAGAATAAATCTTTTCTTGTTCAAGAATGAATTAAA Coding sequence (CDS) from alignment at sc0000228_pilon:63060..69953- >MSTRG.19656.1.p1 ID=MSTRG.19656.1.p1|Name=MSTRG.19656.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2781bp|location=Sequence derived from alignment at sc0000228_pilon:63060..69953- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGGCGCACAAATAATTGCTGCTTCTCATATCGGTAACCTGACTATATC
GAATTCTATTTTCAACAAACTCTGGTGTTATTCTGGTGTTTTTGTTTTTG
CTCATGTCAGCACATTTACGTTCAAAGGTAACAAAATCTCATCTATGAAT
TATTCCAGTAAAAACGGGACCTTGTTGTGGTTGAGAAATATTAACAATAC
CGTTATGCACAATAATATTTTTGAAAATGTTCAGTCACCAACTCTAAAAT
GTACAACCTGTAACAAAATTTCAATGACAGTAACTCATTTCACAAACTCT
TATCGACCCATTGTCGTCATGGATTTCCAATTAATTTACCTTCATTCGTG
TAATTTCTTCAATAACACAGCTGGTCGCGGTGGCGGAATGTCGGTTAACG
GTAAAGGGCAATTGATTTTACATAACTGTAACTTTACGGACAACAAAGCA
ACAAACATAACTCAAAATGACGAGTCAGGTTTCCAGGCTGGTGCGATAGA
TAGCCAAGGAGTGAGTGTCAAAATTTATGATTCGGTTTTCGTAAGAAATA
ACGCAGAGACATGCGGAACTTTCCGTATTACAGGAACTTCAAAGAAAACA
GTTTTTTTGTCTAATGTGAACATTACAACACCTGATAGAAATCTACCAAA
ATTTGCCACTGCGTTTGAGATCAACGGACCAACTCTCACAGCGAAAAATT
TACACGTCATTGTTCAAGCAACGGAAGGTTATATTGACATTTTCAACACA
GAGTTGAGCAAATCTGTATCAGCCTTGAAATTTGAATGTCCTAAGAACGC
AAAAGTGAACAACGCCCAAGAGATTTTCTTAAGTTGTGAACATTGTCCGA
AAGACAAATACACTGAACAGGCCGGATTTATGCATTTTAACAACTCTAAA
TCACATATAGAGCCATTTCAATGCCGTCCATGTCCTTACGGGGGTCAATG
TACAGGAATGAAACGAATATCCAGTCGACCGAACTTTTGGGGTTTTGTGC
AAAATGAAATCGTCAAATTCATTCAGTGTAAGTCAGGTTACTGTTGTGGA
GTAGGTGACAAATGTGCCGGTATCGATAGTTGTGCTAATGGACGTACTGG
TCCGGTTTGCGGCCAATGCCATGACAACCATTACGTAAACTTCTTTGACA
GTAAATGTATACCAAATGAAGAATGTACTCATCAGATTTTGACATGGGTA
TTATTCGGTATTGCTGCTTTTTTGTTATTCATCCTGGTGGCATATTTTCA
AGACCTCTGGAATTTGTTCCCATGCTGTAGAGTTCTATGCCGAAGCTGTA
AGGAAAATAGCGATACGTGCGACGAAGATGAACAAATCATAGCAACTGAA
ACTCCCCGATCTTCCCGACCGTCTTCTTCAGGATCAACCTCACCGACAGG
ATCAGAGTCGTTTCAATCTGCTCTGTCACATCCAGATGTATCTTCTGAAA
ACGAACCACTCATACATAACGAATTCAATCCAGATGACATTCAGACAGCA
GAATTAGATGAAGAAGTTTCATCACAACCCAATGAATCTACACCAACATC
CGAGCAAAAAGAAAAGGAAAAAGCCGGTACTTGCACTGTCTTTTTCGGAA
TGATCAAAATCTTGTTCAACTTTTATCAGATCAAACTTCTGATCGATATT
GAAAAACCTTCAGATCACATGACCACGAAAAATGACTGGTGGCGTCATCT
TTTGTCTTCCATATTTACAATTCAAGTAAATTTCGAGGATTTTTCGAGCT
CATATTGTTTCTTTCATGGAATGGATGACATGCATAAACTCTTTATCCAC
AAAGTGTTAATTTATCCAGTTGTTATCTTGCTTGCTATTCTCTTAATGGT
CCTCTACCACTACATTTTCCGACACGTTCCCTTGACGGCATGCTGTCAAC
CAAACGAAGATTCCATTCCGTTTGTCATGCGTTGCAAAAAGTTCATCCTT
CGAATCGTTTTGATCGGGTACACAAGCATCGTGACCTTTTTGTTGGTGAT
GACGTCATGGACGTTCGTACAAAATGATGAACTGGTCCTTCTCGTCAAAG
GAGATGCTGCATATTTCAATAATTGGACTATAACTTGTATGGTATTCTTG
GTTTTATGGGCTGCTCCTTTCCCGTTCAACGTTTATTTCACCACACGCTG
GCTTCAAAACAAAGAGATCACAATCAATAAGTTTCTCATCTGCTTCTTGT
TTCCACCGTTCTCTGTCATCTTTTATCTATGGAAACGTTTCTCCAGAGAA
ACAGACGATATAGTTGAGCCAGACGCGAAAATTTTATTGTCTATGTACGA
GGCACCGTTTCGTCGACGAATGAGCAAAAAAGAAGAACCGATCTTACTTT
GGGATGGAGTTGTGGCTGGCCGACGTCTAATAATCGCCTTAGTGTGCGTT
TACTGGCAAAACTACATCTTTCGTATGGTAACAGTGCTACCCGTTCTCTT
GTTATGCCTATGGCATCATTCACATTACAGGCCTTACAAATCAGATCGAA
TGAATCACTTAGAAAGTGGATCCTTTGTCTTGCTGTCAACAATGGTTGGA
ATCAATCTCGTTTGGTCATTTTTCTACGTTTATTCCCTACCATACCAATA
TCCAATGGATGCTTTTGGTAATACTGTGAAAGTGATTGAAGTGTTTATGG
GTTGGTTACCTTTTCTGTTTTTCTTTTGTTATTATTTTTGGAATGTAATG
AAATTAGGCTGGAAAGGTGGTAAATTTGTGTTTTGGTTAATTGCTGACTT
ATGTGTCAGAGCAATACAATCATGTTTCTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000228_pilon | genome | sc0000228_pilon:63060..69953 - |
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