MSTRG.19655.2.p1 (mRNA) -

Overview
NameMSTRG.19655.2.p1
Unique NameMSTRG.19655.2.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000228_pilon:18068..19895-

Legend: polypeptideCDSexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.19655.2.p1 ID=MSTRG.19655.2.p1|Name=MSTRG.19655.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1828bp|location=Sequence derived from alignment at sc0000228_pilon:18068..19895- (Clytia hemisphaerica_ch_hm2_pilon)
CAGGTTAAAGGTGATCCCGAAAAAACGCTCATGGTTCGTCATTTACCAAA
CCAAACCAAAGAAATCAGTTTACGCAACGTTTTCTCACGATACGGGGACC
TACAAAATTGCCGGTTAGTCCGTGACGCCATCAGCGGGAAGAGCCGTGGT
TACGCTTTCGTGGAATACAAGTGTGTGCGTGATTGTGAGGAGGCGCTTCG
TGATTCAGGTGATTTAGTTATTGATGGACAAAAAGTAGTCGTGGATAGGG
AATGTGAACGCACACTAAAAGGTTGGATACCGAGGCGGTTTGGGGGTGGG
TTTGGCGGTAAGAAAGAATCAGGACAGCTCAGATTTGGTGGCATAGAAAG
GCCTTTCCGTCGCCCGATTCCTGTCAATTCAAAACCCTTAGGAAGACAAC
ACTCGTCAACTGAGAGTCGTGACGGAAAAAGGCGTTTCCCATCAACGAGC
GACGCACCACGCTACAAACGAACGCCTCACGACGACGATAAACGCTCACG
AATGAGGTAGTCATGGTAACGAAATGCGCCATCATTAAGAAGAAATCTAA
GGTATGATAATTACATTGTATCATAACATTCTTTCATTCAACATTTTTGC
ATTTGCTTGTTACTGTTTTGAATGACGTAATAATGACGTAATTATGAACA
TAGACGTCGCACGCATGGTATATTGGATCAACAGGAGCTGGTCCAAAACA
GGTTTGAATCCTGTTGTAACTACAGTAGTTTGTCTTTCTCGTATGGTATC
ATACTCCCTGAAAATCCAGGCGGGTCACCTTAACGATTGAGTTGGCGTAA
AATGGGCATCAATGATACCCTGGTGGCGTGTTAGAAACTGAAACCAGGAA
AGATTTTCAAAGCGAAATTGTTTTAGATGGCTCAAAAAACCCATCGATTA
ATTAACGTAGAGTTATTTTCTGACGCACGAGGCCCCAATGTGTAATGCTA
CAGGCTTTGTCTGGACCTCGCTGTTTTAATTAAAATTTTATTGGATTGTA
ATTGATCATATACATTGACATTTATATTCCAAGAATCATGGGGCTTTTTG
AATTTGTGGTCGAGTCAAACCATGCATCGATATAAAAGACACCCTGACGT
TGATGAACAATGAAAAAGTAACTGAATAGACTTATATGATACATTTTTCC
GAGAACTGTGTGTTTTAATGTGCTCGCGACATTGAAATCCAAGATATTCT
GTCGAGGTTGAATTTCCAAATAAAATGCTAATCGGTGCCTTGTCTTAACA
CACTTAATGAAGTCTTATTATCCAGGAAAGTTTTGGATGGTTACGAAAAC
ATTAATGCATTTTGTAATGGTATGAAATTCACCATGACGTATTATTGTTT
GGCTTAACTTGATTATTATTTGGAAAAGACATTCTTCCACGGACTTCTTT
TCTTAACGAACCTCGTGACATTCCTATTCAGGAAGCGTGGTCAATTTTAT
TGGCATTGGATTGTTTCATGACACATTTAACCTAAGTCCTTATTCACCTT
CATTCTTTATCACGAACCTATCTGAACTCATGTTGTGCAAATCTAGCACG
TATCCTGGAAATGAGCTAATGGTTCACGCATTAACTTTACCTTGATGACT
AATGTAATTATTATACTGTAATTGTTTTTGAATGATGCAACCAATCATAA
CCGGGGGTAATGGAATTGGTTGGGTTGATACAATTTAAAGCCTACATTAT
GACGTCTATCTGTGAGAAATTGTATGAATTTGTAACAGTTTTTTTAAAGA
AAAGAAATATCCATTTTAGATTTTCAACCATATTAAGTTATATATGTCAT
TGTCAATCTTGATCTCTTTTTGACAGCG

Coding sequence (CDS) from alignment at sc0000228_pilon:18068..19895-

>MSTRG.19655.2.p1 ID=MSTRG.19655.2.p1|Name=MSTRG.19655.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=510bp|location=Sequence derived from alignment at sc0000228_pilon:18068..19895- (Clytia hemisphaerica_ch_hm2_pilon)
CAGGTTAAAGGTGATCCCGAAAAAACGCTCATGGTTCGTCATTTACCAAA
CCAAACCAAAGAAATCAGTTTACGCAACGTTTTCTCACGATACGGGGACC
TACAAAATTGCCGGTTAGTCCGTGACGCCATCAGCGGGAAGAGCCGTGGT
TACGCTTTCGTGGAATACAAGTGTGTGCGTGATTGTGAGGAGGCGCTTCG
TGATTCAGGTGATTTAGTTATTGATGGACAAAAAGTAGTCGTGGATAGGG
AATGTGAACGCACACTAAAAGGTTGGATACCGAGGCGGTTTGGGGGTGGG
TTTGGCGGTAAGAAAGAATCAGGACAGCTCAGATTTGGTGGCATAGAAAG
GCCTTTCCGTCGCCCGATTCCTGTCAATTCAAAACCCTTAGGAAGACAAC
ACTCGTCAACTGAGAGTCGTGACGGAAAAAGGCGTTTCCCATCAACGAGC
GACGCACCACGCTACAAACGAACGCCTCACGACGACGATAAACGCTCACG
AATGAGGTAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.19655MSTRG.19655Clytia hemisphaerica_ch_hm2_pilongene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.19655.2.p1.exon2MSTRG.19655.2.p1.exon2Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.19655.2.p1.exon1MSTRG.19655.2.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.19655.2.p1MSTRG.19655.2.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000228_pilongenomesc0000228_pilon:18068..19895 -