MSTRG.19410.1.p1 (mRNA) -

Overview
NameMSTRG.19410.1.p1
Unique NameMSTRG.19410.1.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000221_pilon:514271..515767-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.19410.1.p1 ID=MSTRG.19410.1.p1|Name=MSTRG.19410.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1497bp|location=Sequence derived from alignment at sc0000221_pilon:514271..515767- (Clytia hemisphaerica_ch_hm2_pilon)
TCGAGAGAGCAAAATAAAAGGGGTAATCACAAAAGGTTGTTATAAAAACT
CATCATCAAAAGATATTTTATTCATCAGAATCTGCGAAAACAGTTAAAGA
AATAACTTTGGTACATTTTGATTTACTTGTTAGATGCTGCTCTAGAGAGA
ATCAAGAAAAAAGTAAGTATTTGAAAGGGCTGGATGTAAATATTGAAAAA
TTGAAATAATTTCGTATTTCCATTTGAGTTGTGTCTAGCCTGGATATCCA
AGCTGAAAATTATTTTGATGTTTCTACAATTTACAGGTTTTGTCTACCTA
GAATTGGCCAAGTATGTGTGCGCTTTGCCTTCTAATATTGGAATGCAAAG
CTATTTAGGGATGACCAGGCGGTTCCAGAAACATCATTAATGGAAAAAAA
TTACAGCCTGGATATCCAGGCTAAGTTGTGTTTCGTTCCTGAAATTGATT
TTCAAATCATGTCATATCATCTTTTAATTAATATCAGCTCGAAAAAAAGG
ATTAATTTTGGCCAGTTAAACATCAAAGTTGACGAAAGTGGATTATAACC
TATTATATCGAATAGTAGTTATCAATCTTGAAGAGAAGCTTTAGACATTA
AGATACAAAAAATTTTCTACACATTTTAATCTTAATATCAAAACTCTGAC
TAAATTTTCTCCTCTTTTATGTAAACGCAGTGATACCCTGATGGTAGTAC
TTCTCAATATGGGTGGACATTTCTTTTGAAATTTTAAACGGAAAATTTCA
TGAAATTATAAATTGACCCATACCGAATAGTGCTACCATTACGGGTACAA
CTTGGGTATTTAAAGGTCAGCGAGTAAATGTTGTAAATACACTCGTACTA
TTGGAATTATATTGTCTCGTTTAGATGGAGACATCAAGACAAAGAGCTGA
ATCAGAAATTGACAAACATCGAAACCATCAAAATCCAACACCCTCGGCTT
GCCCAAACACCTATCGAATGCGTCCCAAAAGTAATGGTGTATTTTCAACA
ACCAAAGTCAAACCAATTCTTGAATCAATACTATCGAACAATTTGAACTC
TTATAAATATAACGCTAAGACATCTGGAGAGCTATGTAAACGTATTGCAG
ATGAGAGTAAACAAAGAATCAAGCAGCTAGGCTATAACAGATATAAATTG
GTTACTCAGTGTTTGATATTTTCGAATAATACTCAAAGCGTTCGATTTGC
AAGTCGATATTTGTGGGATGAGAAGTTGGATAATTTTGTGAGTGTGACCA
CAAACGGAGGGGATTTTACGTGCACCGTCATGGTGGCTGCGGTGTATTTT
GAATAAAAGAGATATGATACTTTTTGGATTCTCGAGACGATGAATAACCT
TTGTACATAAATTTATCATTAAGCTTGTTCTATTGAGTAAAAGTATTAAA
ATTAATCAGCAAAAATTGTCTTTTCCAGATTTTCTCCTTTAGTTTAACAA
AAATAAACATTGCTGATGAATCTGGCGAATCGCTGTGTAAAAAAATT

Coding sequence (CDS) from alignment at sc0000221_pilon:514271..515767-

>MSTRG.19410.1.p1 ID=MSTRG.19410.1.p1|Name=MSTRG.19410.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=432bp|location=Sequence derived from alignment at sc0000221_pilon:514271..515767- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAGACATCAAGACAAAGAGCTGAATCAGAAATTGACAAACATCGAAA
CCATCAAAATCCAACACCCTCGGCTTGCCCAAACACCTATCGAATGCGTC
CCAAAAGTAATGGTGTATTTTCAACAACCAAAGTCAAACCAATTCTTGAA
TCAATACTATCGAACAATTTGAACTCTTATAAATATAACGCTAAGACATC
TGGAGAGCTATGTAAACGTATTGCAGATGAGAGTAAACAAAGAATCAAGC
AGCTAGGCTATAACAGATATAAATTGGTTACTCAGTGTTTGATATTTTCG
AATAATACTCAAAGCGTTCGATTTGCAAGTCGATATTTGTGGGATGAGAA
GTTGGATAATTTTGTGAGTGTGACCACAAACGGAGGGGATTTTACGTGCA
CCGTCATGGTGGCTGCGGTGTATTTTGAATAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.19410MSTRG.19410Clytia hemisphaerica_ch_hm2_pilongene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.19410.1.p1.exon2MSTRG.19410.1.p1.exon2Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.19410.1.p1.exon1MSTRG.19410.1.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.19410.1.p1MSTRG.19410.1.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000221_pilongenomesc0000221_pilon:514271..515767 -