MSTRG.19402.2.p1 (mRNA) -

Overview
NameMSTRG.19402.2.p1
Unique NameMSTRG.19402.2.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000221_pilon:424760..426630+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.19402.2.p1 ID=MSTRG.19402.2.p1|Name=MSTRG.19402.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1871bp|location=Sequence derived from alignment at sc0000221_pilon:424760..426630+ (Clytia hemisphaerica_ch_hm2_pilon)
TTTGAAAGCAGTCACTTGTAAATAGAGTACTTGAAACATTTATGGGGACA GCCTTGCTTGTTAGAGGGTAATAGAGAAGTTTGTTGGTGCAATAGATAGT TTTCTGAGGTTTCACAAAAACACTACAGATCTAGTGTAGAAAGGAACAGG CATAACCTCAAAGTTTTATAGATCGACACAATATCGACCTCATTATACAC AGATAGATATTTCATGAAGTGCCGTGATAAGGTTTGGTGTAGACTTTAAG AAGGTAaggttaaaatgaaaataataggttaatttcgaattatggagtaa ggtttattgaggcattgttaactgaagggtcCATAACATTTGTTCGAGAC TAGGAAACTTGTCCAGGTTAAGGATTCATTTGAGTCAAAGAGGCTGTAAT TAAAAGACTTTGATCTGAGAGTggcgggaattaaatttggaGATTATTAT TTATAACAATACCTTTAATTCCTTTGTCTTTTTAGGATGGACGCAACGGC AATTATTTCCATTCTTTTATCCGTTCAACTGATCAACGCAGCTAGGATAC CATTTTGTTCGGATGATGCAAGCCAAGGTGAAATCCTTTCGTATAACTCT TGTTCTGTTCTATTTTGTCACAAGAAACTGTTGACCACACTTGTCCGGGA AGACGACATGTCCGTATTATGTTTCGCGGAATTTCTACCCATCCGCAACA ACCGTGCTTGTCGGATCAATGGAATTGTTTACCAAAATGGTCACGTGATC ACTTACAACTCCGTTCGAGCCACTTTGAGGATTTGTTTAGGTGGTGATAA TACTATATTAATCTATGGGAAGAAAAATACGGAACGTGAGCAACTTTTTA AGGAACGTATGGAAGTAACAGGTGGTGGAAAAGAATCGAATGAGGACCCT GTTGAAGAATATGACGGAGATAGTGACTATTATGATGGAGATAATGCATA TTATGGAGATAATGCATACTATGGAGATAATGAAAATGAAGAGATGGGAA TTTTATGAATAATATCCAGTCGCAAAAATTGAGAACTTAGACTTTGCGAA AATTCAACAATAGCTTTGAGTCCGAGTATCAAACTCATTTTCTAGTttga tgtaaattttagttaggcaattatatattttgttttCAAATTTGAAGcgA TATAATAGATAGGATTGATTGAACCAATTGATTATTTCATATTACTTAAA AATTTACTAGTCGAACATTTTAGATgtaacaatattttttgtttgagaAC TCACAATATAGAAATATATCTTTTGTACAAAACTAACATCAATGATGATG ATGGCGAaaccggaaaaataaaaacatcactGTCTGAAAAATAACAATAC TCAAGTCTCTAACTTTATAAAGAAATATACATTAAAAACCATCAACACCT CATTGTTTTCGACAAAATAACAAACCCCAAAACACGTTTAATCGTTCATT AAATGGTCATATCGTGAGAAGTCACGAAGTCCCAATTATTATATTACGTC ATGTTATATAATCCTCAAACCGTCCACATGTGTGTTAAACCAACCAATCA CAGGACATCCTGATACTTATCCTCCAATCAGAGAGCTAGAAAACCACGTG atcaagcttctgattggtcgagAATGAATATACTTATGAAGTATCCATGG TGGAAGATTCAGTTTGTTCATTGAACATGAATTCTTGTTGGTATTCTTTC AAGAATTGCGCAGATCTTCCTTGATCGAAAAATAAGGAATAAACTTTCTT TATATCCTCCACGTCAACTTCAGTAccctagaaaatgaaaaaaaaaacat taaacatGTGATCATTTAGTATTTCAAATGcataattaaatatttcccgc tttccaaaagggaaatattta

Coding sequence (CDS) from alignment at sc0000221_pilon:424760..426630+

>MSTRG.19402.2.p1 ID=MSTRG.19402.2.p1|Name=MSTRG.19402.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=522bp|location=Sequence derived from alignment at sc0000221_pilon:424760..426630+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGACGCAACGGCAATTATTTCCATTCTTTTATCCGTTCAACTGATCAA
CGCAGCTAGGATACCATTTTGTTCGGATGATGCAAGCCAAGGTGAAATCC
TTTCGTATAACTCTTGTTCTGTTCTATTTTGTCACAAGAAACTGTTGACC
ACACTTGTCCGGGAAGACGACATGTCCGTATTATGTTTCGCGGAATTTCT
ACCCATCCGCAACAACCGTGCTTGTCGGATCAATGGAATTGTTTACCAAA
ATGGTCACGTGATCACTTACAACTCCGTTCGAGCCACTTTGAGGATTTGT
TTAGGTGGTGATAATACTATATTAATCTATGGGAAGAAAAATACGGAACG
TGAGCAACTTTTTAAGGAACGTATGGAAGTAACAGGTGGTGGAAAAGAAT
CGAATGAGGACCCTGTTGAAGAATATGACGGAGATAGTGACTATTATGAT
GGAGATAATGCATATTATGGAGATAATGCATACTATGGAGATAATGAAAA
TGAAGAGATGGGAATTTTATGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.19402MSTRG.19402Clytia hemisphaerica_ch_hm2_pilongene
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.19402.2.p1MSTRG.19402.2.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.19402.2.p1.exon1MSTRG.19402.2.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.19402.2.p1.exon2MSTRG.19402.2.p1.exon2Clytia hemisphaerica_ch_hm2_pilonexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000221_pilongenomesc0000221_pilon:424760..426630 +