MSTRG.193.1.p1 (mRNA) -

Overview
NameMSTRG.193.1.p1
Unique NameMSTRG.193.1.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000001_pilon:3601605..3603375-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.193.1.p1 ID=MSTRG.193.1.p1|Name=MSTRG.193.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1771bp|location=Sequence derived from alignment at sc0000001_pilon:3601605..3603375- (Clytia hemisphaerica_ch_hm2_pilon)
TGAAACCATAAATTGACACTTTTGAGACCTCTTGGATGAGGTATAAAAGG
ACGCAGTTCTGTAGCAGAAACTCATTCAATATCACAACTCAAGAGAGAAG
ACAAGTACAGAGACTTGAACAAGAAATAAAGAATTGATACACGAAAATGG
GTAAGAATCTTGCTGCTCTATTCCCTAAACCTTTCTTCGCCAGCATCCAA
TATGCGAGTTGTCCTAAGGATTAGAAAAATCAGATGTTTATCAGTTGTCA
TGTGTTCGCTTTGCCTTATCTCAAATTAAAACACTTACAGGAAATGCAAA
TACATCAAATGAATTTGACTTTTTTAGGGTCGAATAAGACTAGAGTTGAC
TTCTGACTAAACTGTGCTTTTTGATAATTTTTAATGACGCTGAGTTCAAT
AAGGAACACTTAATCGCGCCATCCAGTCTATCAAATATCCTTAAATGGAC
CCCGGGCTAAGGTCCTATCGAATTAGGATGTCAGTTTTCCGAATTATGTA
GTTCAACTTTTCAAAATGGATGATCAGCTAATTTATTTTATCATTGACAG
GTATCTTTAGCAAGAAAAACACAATCGAGTTCTCTGCACAACAATCATAC
GACAGTGTCGATGGTGGTACACAACGCAACAAGATCCTCACCAACATCCA
ACGTGAAGCCCGCGCGGCCGCGATATGGCTTTCCAAACAGATAAAACAGT
ACAGCGAGGACAACTTTAAACGTCAGAAAACCTCTTTCTTCCATCGACTC
ATCACCAAGAGACCAGCCTACAAAACACCACTGGAATTCCAGTTATTCGA
ATTGCCGCCAGATGACGACATGCAACGGACTGACGAACGTCGGCTGGAAA
TTATCCGTCGTATTTTCGAGCAGGTTGAAAAGATTTTACTCGTCCTCTAC
AATGGTGGCGCCGGTGAGAATGTAGCTAATGAAATCTTAGTGCGACTTGG
AAATTTAACCAATCCTCACCATTCAATGACCAAACTTAAGCTTGTCATGT
CAATAAAACCTGATGCCGTCGTTTGGAACGTCACAGATCAAGATTTGCCC
AAGTTAGAATACACTGCGGACAACTTGGACCCAAAACGCTGGCCAACTCT
TAGAGACACCTCCAAAATCCCGAAGGACCAAATCACGGACAAAACGAGAA
CAAAGTTTATTATGCTGACCATTATTTCAGAACTTTTTGATGTGATGGAC
GAATTGAGTTTGATAGCAGGGGCCAACATTAACTAGGTACGGTATTTCTT
TTTAGCGGTAAATGTTTAATGAGTTTAATGATATATTTAACTTAAAGATA
GTAGCTATAAGAAAAGTCCAAACAATAGTCTAGCGTTTTATATATTGATC
TAATATTCAGTTCGGTGTATTTTTTCCATTTTTACGCAATTCTTGAGAAT
CTACGACAAGAGTTTAGAGCACACCCTTACACTTTGATATTCATAGTTTT
CAAGGTTTTCAATAATATTTTATTACATTTTAGTAATTTTTTTGTTTGAT
ATTTAAATTTGTTTTAAGCGATTCTAAAGAAACTTAGCTGAACGAACGCT
CTTGAAAGCACTTAAAACTCTCAAAATTTCTTGACACAGGAGACAACATT
TTAATCTTACTTTGACCGTTAGATTGTATATAATTGAATTGTAATTATTT
CAATTTTTTTATTCTTTATATGTTAATTTTATATATTTTCTAATTTAATT
TCTAATAATCTAAATTTCAAGGTTATCTTAAAAAAACATATACTAGTCAT
ATTTAATAACATTATTTTATT

Coding sequence (CDS) from alignment at sc0000001_pilon:3601605..3603375-

>MSTRG.193.1.p1 ID=MSTRG.193.1.p1|Name=MSTRG.193.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1380bp|location=Sequence derived from alignment at sc0000001_pilon:3601605..3603375- (Clytia hemisphaerica_ch_hm2_pilon)
GTATCTTTAGCAAGAAAAACACAATCGAGTTCTCTGCACAACAATCATAC
GACAGTGTCGATGGTGGTACACAACGCAACAAGATCCTCACCAACATCCA
ACGTGAAGCCCGCGCGGCCGCGATATGGCTTTCCAAACAGATAAAACAGT
ACAGCGAGGACAACTTTAAACGTCAGAAAACCTCTTTCTTCCATCGACTC
ATCACCAAGAGACCAGCCTACAAAACACCACTGGAATTCCAGTTATTCGA
ATTGCCGCCAGATGACGACATGCAACGGACTGACGAACGTCGGCTGGAAA
TTATCCGTCGTATTTTCGAGCAGGTTGAAAAGATTTTACTCGTCCTCTAC
AATGGTGGCGCCGGTGAGAATGTAGCTAATGAAATCTTAGTGCGACTTGG
AAATTTAACCAATCCTCACCATTCAATGACCAAACTTAAGCTTGTCATGT
CAATAAAACCTGATGCCGTCGTTTGGAACGTCACAGATCAAGATTTGCCC
AAGTTAGAATACACTGCGGACAACTTGGACCCAAAACGCTGGCCAACTCT
TAGAGACACCTCCAAAATCCCGAAGGACCAAATCACGGACAAAACGAGAA
CAAAGTTTATTATGCTGACCATTATTTCAGAACTTTTTGATGTGATGGAC
GAATTGAGTTTGATAGCAGGGGCCAACATTAACTAGATGGGTATCTTTAG
CAAGAAAAACACAATCGAGTTCTCTGCACAACAATCATACGACAGTGTCG
ATGGTGGTACACAACGCAACAAGATCCTCACCAACATCCAACGTGAAGCC
CGCGCGGCCGCGATATGGCTTTCCAAACAGATAAAACAGTACAGCGAGGA
CAACTTTAAACGTCAGAAAACCTCTTTCTTCCATCGACTCATCACCAAGA
GACCAGCCTACAAAACACCACTGGAATTCCAGTTATTCGAATTGCCGCCA
GATGACGACATGCAACGGACTGACGAACGTCGGCTGGAAATTATCCGTCG
TATTTTCGAGCAGGTTGAAAAGATTTTACTCGTCCTCTACAATGGTGGCG
CCGGTGAGAATGTAGCTAATGAAATCTTAGTGCGACTTGGAAATTTAACC
AATCCTCACCATTCAATGACCAAACTTAAGCTTGTCATGTCAATAAAACC
TGATGCCGTCGTTTGGAACGTCACAGATCAAGATTTGCCCAAGTTAGAAT
ACACTGCGGACAACTTGGACCCAAAACGCTGGCCAACTCTTAGAGACACC
TCCAAAATCCCGAAGGACCAAATCACGGACAAAACGAGAACAAAGTTTAT
TATGCTGACCATTATTTCAGAACTTTTTGATGTGATGGACGAATTGAGTT
TGATAGCAGGGGCCAACATTAACTAGATGG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.193MSTRG.193Clytia hemisphaerica_ch_hm2_pilongene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.193.1.p1.exon2MSTRG.193.1.p1.exon2Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.193.1.p1.exon1MSTRG.193.1.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.193.1.p1MSTRG.193.1.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000001_pilongenomesc0000001_pilon:3601605..3603375 -