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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000216_pilon:612632..616601+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.19211.1.p3 ID=MSTRG.19211.1.p3|Name=MSTRG.19211.1.p3|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3970bp|location=Sequence derived from alignment at sc0000216_pilon:612632..616601+ (Clytia hemisphaerica_ch_hm2_pilon)
TATGTATCATAGTGTATATAGAGCGTTATATATTATCATAGTAGAAACGG
GCCCTTACGGACCGTCTTATGTTTATGTTATGTAGATAGGGCCTTATCTT
GAGAAGATCATTCTAGAAAACAACATGGCGCTGCGAGCATGTGATTGTtg
ctgaaaagaagaaaattatagttttacaaaaatttttggtgTTCTTCAAT
GAAATGGCTGAAGAAGGAGGAGCAGGAAGTGGAACTAATAAAGGTGGTTT
CAAACCTCCTACACTTGACTTTTCTGTGGATAGACATTATGCTTTCAAAA
TCTGGAAAGAAAAATGGGATGACTACTTGCTTTTGACTGATGGAGCTCAA
AAACCAGCAGAATATAGAGCTGCCATGATTAGATACTGTTTTTCTTCTGA
GACAAGAAACATTTATGATTCATTAAATTTATCGGAGGCTGAGAAGAGAA
ATCCTGAGACAATAATCGACAAACTTGAGCAATTTGCTAAGGGAGTCATC
AACGAAACATTAGAACGACATAAATTCTTTGCCAGAAAACAGGAATCTGG
TGAAAGTTTTGATGACTTTGTGACAGAATTGAaacttttgagcaaaaatt
gtaACTTTTGTGATACCCCACAATGCTACCCAAGTTTACTTCGAGATCGA
ATCATCAGTGGAATTTCAAGTGATGTTGTACGTGAGAAACTGTTGGCTGA
ACGAGATTTGACGTTGGCGAAGACACTCGAAATTTGTAAATCTGCAGAAA
CAGCATCCACTGGGATGTCAACCCTTCGAACCTCAAATACACAAGAACCT
TCAGGAACTGCAGTAGACAGGGTAGGAACTCAACATACtgatttttataa
caacaataACAAGAGAAGTAACAATCAACAAACACGTCAATTTGGAGATG
GTAAGAATCGAGTTAATTGTAAATTTTGTTCACGAAACCATGAATTTGGT
AGGAAAAATTGCCCAGCCTGGGGTAAAGAATGCAGAGACTGTGGGAAAGC
AAACCATTTTTCGAATAGCAAAGTTTGTCAGGGAAAACAGGCTGGGGGAG
TACACCAACAAGAGAACAATGAACCTTTAGATCTTTTCTATCTGGGGGGT
ATTTCAGCGGGTAGTGTCGAGGGGGTGGACGAGGTTGAATCTGAAAGTAT
CCAAACATCAGTACAATTTATGCAAAATTGTTGGGAGACTGTTGTTCGTA
CCAAAGTAGGACAAGTACCTTTTAAGATTGATACTGGAGCAGAAGTGACT
GTAGTTGGTGAGAGACATTTGAGTCCATTAGGAATAAACAAAGCTGCAAT
GAGATCAACAAATCGAAAACTTGTTGGTCCAGATGGAAAACCCTTGAACT
GTATAGGGTTCGTAGCAATCAAAGTGTCATTTAATGAAATAACCGATGTA
TTGAATATGTATGTATGTGAAAAAGTTCGAATACCGTTGTTAGGATTACC
AGCTCTCAAGAAATTCGACGTAGTACGACTTAATTCGAATAAGATAGACA
ATACCAAAGTTTCAGCAATATCGAATGACATTATTGAAAAGTATCCAAAA
TTGTTTGAGGGACTTGGTAAAATTAAAGGTGAACCTGTTAAAATTGAATT
GATGGAAAACGTTACCCCATATCACATTAATGCACCAAGACGAATACCTT
TACCAATGATGGAGCCAGTaaaaaaaGAACTAGAGAGAATGGAATCCATG
GGAGTGATTCGAAAAGTTGACAAACCTACAGCATGGTGTCATCCCATGGT
AGCTGTCCAAAAACCAACAATACCAGGCCAACCAGCAAGATTACGAATTT
GTATTGACTTAACACAattaaacaaaacaacGAAACGTGAATTTTACCAA
CTACCAAGTTGTGATGAGACATTAGCTCAAATTGGAGACAACGGCAAAGT
ATTTTCAAAACTAGACGCAAATTCAGGATATTGACAAATGCCTTTGAGTG
AGGAGAGTCAATTAAAAGCAACTTTTACGACACCGTTTGGTCGTTATTGC
CCAACTCGTGCACCGTTCGGATTGACATCAATGCCGGAGATATTCAGTAA
AAAAATGGACGAAGTAGTAGAAGGACTTGAAGGTGTGATTAAAAGTATGG
ATGATTTTCTAGTTTACGGTAAAAACGTACAAGAACACGATGAGAATCTT
GACAGACTGTTTAAAAAACTTGAAGAGTATAACGTTACGttaaatgaaca
aaaatgcAAATTTCGTCGAAGCGAAGTAGAATTTCTCGGACATTTGATAT
CAGCAGAAGGTATAAAACCACTTGCATCAAAAATTGAATCAATCATTGAA
TTTCCAACACCGACATGCATCACAGAGTTAAGGAGTTTTTTCGGTATGGC
CCAGCAATTGGCACGATTTAGCCCAAAGTTTTCGAAAACAGCAGAACCGC
TGAGAGATTTACTAAGCAAAAAGAATGATTGGTTATGGACTCCAGTACAC
GAGAACGCTTTTCAGGAGATAAAAACTTTACTCTCTTCGCCACCAATATT
GGCACATTACAATTGCAATCGTGAGACGAAAATACGTACAGATTGTAGTA
AAAAGAACGGACTTAGtgtaattttatttaaaaaatttgacaatgaatgg
AGACTAGTCGATAGTGCTTCGAGGTGGTTGTCACCTGAGGAAAAGAACTA
TTTCCCTATTGAAATCGAAATGCTGGGAGTCGCTTGGGGATGTGTTAAAA
TGGGAAAATATCTACAAGGGTTGCCAAACTTCCTTGTAGAGACAGATCAT
AAACCGTTGATTCCAATTTTGAACAGTATTAGACATGTCACCCAGAATTC
AATTATTGAGAATGAGGTTGCTTAGATTCAACTTCGTAGCAAGTCATGTG
CCTGGTAAAGTTCTCCTTGATGCCCATGCTTTGTCAAGGGCGCCAGTTAG
TCTGCCAGGTAAAGAAGACATGCTTGCAGAACAAGAAGTGACATGTTTTG
TGAATTCCATCATCGACAACATCCCAGCCACACCGAGCAGAATCAACGAA
ATTCGTCACGAAACTCAAAATGACACTGAACTGAAACAAATTTGTCGATT
CATTGAAAACGGTTGGCCGAGAACTTACAATGACTGTCCGGAGTCAATGC
GAGCTTATTGGAACGTTCGAGACCAAATGACATTAATCGACGGTTTAGTT
CTTAACGGAACAAGAGTAGTCATACCTAAATCTCTACAGAAAAGTATTTT
ACAAACTATACATCAAGGTCATCATTGAATGGTGAAGTCCAAACGAATCG
CCCGACAATCCGTTTACTGGCCGTATATCAATAGAGACATCGAGAATCTC
ATATCGAAATGTGAACAATGCATTAAATACCAGCCATCGAAGCCTAAAGA
ACCGCTCATCAGCCATGAAGTACCAGAAAAACCATGGGAGAAACTAGGAA
CTGATTTGTTCAAATATGCCGGTAAAGACTACCTGATTATAGTTGATTAT
TATTCTTTGTGGCCCGAAGTTTATCTATTGAGACGCGCTACATCATCGCA
GGTTATAAATGCAACAAAGGCAACTTTTTCAAGACACGGTATACCAAATG
AAGTGATTTCTGACAACGGATCACAGTATTCATCTCGTCAATATCGTCAA
TTTTCCCGAGACTGGAAATTCAATCACAAAACCAGTAGTCCACGTTATCC
GAGATCCAATGGATTGGCAGAAAGTACTGTTAAAACTGtaaagaacatca
aaaaatgccACGAATCAAACGATGACATATTCAAAGGATTGTTATCATAT
CGAAACACCCCGTTACCCTGCGGTAGTTCACCAGCTCAACTATTACACGG
ACATAGTTTAAACGATAATTTACCAAGGTTACAACCCACGACGAATCAAT
TACACCATCGACCAGTTCGTGCCGAACGCTTGCAGTCTAAGACATACCAC
GATATCAAAACAAGAGAGAACAGACAAAAATTCAATCCGAACCAACTTGT
CGTTATTCAAGGAGAGAATG Coding sequence (CDS) from alignment at sc0000216_pilon:612632..616601+ >MSTRG.19211.1.p3 ID=MSTRG.19211.1.p3|Name=MSTRG.19211.1.p3|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=741bp|location=Sequence derived from alignment at sc0000216_pilon:612632..616601+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGTGAAGTCCAAACGAATCGCCCGACAATCCGTTTACTGGCCGTATAT
CAATAGAGACATCGAGAATCTCATATCGAAATGTGAACAATGCATTAAAT
ACCAGCCATCGAAGCCTAAAGAACCGCTCATCAGCCATGAAGTACCAGAA
AAACCATGGGAGAAACTAGGAACTGATTTGTTCAAATATGCCGGTAAAGA
CTACCTGATTATAGTTGATTATTATTCTTTGTGGCCCGAAGTTTATCTAT
TGAGACGCGCTACATCATCGCAGGTTATAAATGCAACAAAGGCAACTTTT
TCAAGACACGGTATACCAAATGAAGTGATTTCTGACAACGGATCACAGTA
TTCATCTCGTCAATATCGTCAATTTTCCCGAGACTGGAAATTCAATCACA
AAACCAGTAGTCCACGTTATCCGAGATCCAATGGATTGGCAGAAAGTACT
GTTAAAACTGtaaagaacatcaaaaaatgccACGAATCAAACGATGACAT
ATTCAAAGGATTGTTATCATATCGAAACACCCCGTTACCCTGCGGTAGTT
CACCAGCTCAACTATTACACGGACATAGTTTAAACGATAATTTACCAAGG
TTACAACCCACGACGAATCAATTACACCATCGACCAGTTCGTGCCGAACG
CTTGCAGTCTAAGACATACCACGATATCAAAACAAGAGAGAACAGACAAA
AATTCAATCCGAACCAACTTGTCGTTATTCAAGGAGAGAAT
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000216_pilon | genome | sc0000216_pilon:612632..616601 + |
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