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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000216_pilon:552346..556315- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.19207.1.p1 ID=MSTRG.19207.1.p1|Name=MSTRG.19207.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3970bp|location=Sequence derived from alignment at sc0000216_pilon:552346..556315- (Clytia hemisphaerica_ch_hm2_pilon)
AAAGAAAAACGAAATTCTTCAAAAAATACTTTCTTATGAAAGAACCAGCC
AGATAGTTTTTGCTGTTACAAACAAAATTTATTTCAAACAAAAATGGCTG
ACGTACAGGATGAAAGAATACTCGGTGCAGAAACCAACGACATTCGAGAA
CGCACGGCAAATAATCAAAACACAGTCGATCATACCGAATCAAGTGTTAC
TGACCCCGGACAAACTGATCTCCCGAATGATAGCACCGTACATTACCACC
TGACAGATGTAGACGCTCACCCTGATCAGCATATAGAAAACCTACCGATA
CCTCATGTTGATGATGGCACTCGTACGATTCGTAGAAGTGACAGTCAATC
ACGACACCGATTAACCAACCCGATGATCACATTAACACCATCGGGAATCG
AGACGTTGTTTCAAGGTATAACTAATCATGTGTTACCACCACCTGCCGAC
TTTGCAGATGAGACTAATAATGAACCACTTGAGGGCGGTGCTGAGTGTGT
TACCGCCCAATCAACCGGTTTATCTCTTGATGAAGGCGCCCTTATCGAGG
AGACAAGTTTAGTTCTACCACCGCCAGAACCTATCATGACTAGTGAAACT
TATGAAATTGACCACAAAATAAAAACTGATAAAATTCTCAACGTGCTGCA
GGGAGAAGGCTCAAAGAACTGGGAACCGGAAGAACTGGGTCAAAATGAAG
TTACTGAGTCACATATAGCTAACGAGTCGCTTCGATCACGTGATGTTAAT
GAGATATACGAAGCTCACGAGTCAAATGACACCAGTGAGTCACATAAAGC
TAGTGACACACAAATAGCTAACGAGTCACTTCAATCAACTAGCACTCTTC
TAGATCCAAAAAATGATAGTCAAACATCTCAAGCTACAATCAAAGCAACT
GAGACTGATGAAACCCTGGACACATTGAAACAAGAGTCGGGGTTAAGGCC
CCATATTCACCAAGTGATTGGAGAAGAAGATGATGAGATGCAACAAAAAC
CAAGCGAAGATAGAGAGCTTGTTCTTAGGGTTCATGCAGCGCCCATTGTG
GATAGTGAAGCATCTCTGAAGGTAGTAATATTCTAGTTTGATGCCTTAGT
AGACTAGCACCTTAAAATGAGTACCCAGTTCGAACCCTAGTCTGTACACA
GACCCGATATCTACGACTAATTTCAAAATTCATTGCCGTAGAGAGTCTGT
TGTCATTCTCTTTTCTGATTTGAGATTTTTCAAACCGACCGCTTCGATGG
AGTGTTGGCGAGAGAGGGGAGACGATGAGAGAAGTGTTACTATTTAAAAT
CATACTTCGTCGCAGAGGTCTCCGTACGGGAATCTTGATATCAAACAGAC
AATGCGCACAGAGTGTACTGCGAAGCGATAAACGTTATGAGATACGCTCT
GGTACAGACTATTCGAACCCCTGCTTGGTCAAAAGGTCAAACTCAAAAAT
AGCTGACCCGGGTGGCCCACGTTCCTAGACTAGATTACTACCAATATCTC
CATGAAAAGCGAACTCACAAAGATATTGTAAATCGTGAACTGCTATCCCA
TATCAGTCTTTATGTCTTAAAGGTTTTATTACGAAAATCACAAATCAATT
TAATTTTTCAAGTGTTCACCAGGGGTATTTCGAATTCAATTCCTCAGTAG
GTAGGTATTCACCACTGACCTTTATAAACCCTTGACCAAGCTTTATCCTT
CATCTTTGATTGGAGTTCTTAGAAAAGTGATACAATGGAACCTCTAATTA
GCGGACACCATCGGGGAATAGGGTTAGTGTCCGCTAATTAGAAGTGTCCG
CCTTTTAGAAACTTTTCAATTCTGTGCTCCAATTTTGGTACTATCAAGGG
ATAAAGTATGTAAAATTTTGATCCGAAGTGCTTTTCTAGAGACACTAGGA
CATGGAAGAACAAGAGAATGATCATTCAAATGCAACAATTTAGTTTTATG
AACCACAGTAGTCTTGAGGTCCCTGTAATTTATCATTTTTATGACGTAAA
CAAATTTACCGAATGGATAAAAGGGAGCGCTCCAAACGTCTATAAGCGAT
TTGTTCAATGAAACTTTGAAGTGTTTAAGCAATAAAAAGTTTGGATAAAT
CAACCCTGTCTAATTTTTTAAAGTCTGTGACCAGTTTACCGTCGATGTCC
GCTAATTAGAGAGGAAAAAGTAGGGTTTCTGCCGTTTCGTGCAAAGAATT
TTGTCCGCTAATTGAGGGTCCGCCTTTTGGAAACTTTTTTATGAGAATTT
GACTATAGGAAATGGCCGGGGAAAATAGAATTGCCGCTAATGAGAGGTGT
CCGCCTTTTAGAGGGTTTGTTAATTGGAGGTTTTACTGTACTCTAATAGT
AGCACTACTCGACGTGGGTCAATTTATAATTCAATGAAATTTTACGTTCA
AAAATGTTTTTATACCATATTGAGTAGTGGTACAATTAGGGTTCCACTTT
CAAAAAACTCCAATCAAAGATTTTGTTTGGGCGAGATCGAGATCGAGAAA
CTGTGTCCAGAGTACATATACACCTTTTCGACGGTAGTCGCCAATTTCCG
CGCGGGCATTTTTCTGTCCGCTTTATCCCACTAAAACCGTCCCAGTCCTT
TTTTCGTATATATAGACAATAGAAAAAGGTGTCAAAAAAGGATTGGGTCG
AGTTTAGGGGGACCGCGCGACTACGATTGAAAAGTTGTATTAAAGGTCAG
CGATATTCACCAACGATAAACACGAGATGACTTTATTTTTCTTGTTTCTA
TTTGCAGAACGATAACCAAAGCAATGCTGTTTTCAAGATTCTCTCGATGG
ATACAGACATTATAAAAGCACAAATTAAAGAATATCTTCTATACGGAGAT
TATTCAAATAAAGCTACTATCGAAAAATACAAAGTCGTCACACCAGCGCT
TATAGATCTCATTGCTAGAATTAATAAACACGACGAGAGGTGTATCAAAA
AGAGAAAAGCTGAACGAGGCCTTGGTGTTGCCACAACCTTCGGTGTTCAT
TTAGCATCTTCGAATGACCAGGATGGAAGTTCTGAGACGCAAGTGAACAA
GAAAACAGAGATGTCGAATCATTGGAAGGAGCACTTAACCGCGTTAACTC
TTTCTGATGATTTCAAACTTTTTCCTGCAGAGATGCAAAAAGTGTTATTG
TATATCTCGAATCTTCGTGAAGACCTCATTGAAATTTCTAAGACACTAAA
AATTAACTCAAAGCGAGGAAGCCCTACATCTAGTACACACCTTCTAAGCA
CAAAATCATCCTTGGTAAAACATCAGAAAGCAAAAAAGAATGATCCAAAG
AAAGTTCTACTGGCCACAAAATTGAAATATGAAAAAGACATACAGTTGGT
TAGGAAAGAGAATGCGGAATTGATGGCTACAATTCGACGATTACGTTTAT
CTAAGAAAGTTTTACAAACGTGCAAGGAGGCTGATAAAAAAAAGCTGACA
GTGAAAATTCGAAAAACAAGATCGGCCGTAGAAAGAACATCACACCATCT
GAGGGCCGTCGAGAGCGAGAAGTTGGAGACTGAAATCGTATTGGCGGAGT
TAAAGATTAAAGCTGAGGCGGAGATTAGGGCGTTGAATGCGGCAAACGAG
GTGGAGATTAATAAGTATAAATTGAAAATACGGGCAATGACTTTGGATTG
TAAGGCGAAAGATGATCACGTGACCAAATTGGAAGATAAAATCAAAACGA
TGGAACGTCGTTTCCATAACGATTTGGTTGCAATGGAAATACATTATAAA
GGAAAACTCGAAGAAGAGTTACGTAATCGCAAATGGAGTGTCCGCTTAAA
ACGCACGCTCGCTTGCGGACGATATTTTGAGAATCGCCGTACAGAACAGT
TCTATCGCGAGCATACAGCACATAGCCAGGGACGTACGGAAGAGTTTTAA
TAATTACAAAACAGTTAATAAACGATGTATCTGCAAGAAATAAATGGATA
AAAAATTTGAACAAATCATT Coding sequence (CDS) from alignment at sc0000216_pilon:552346..556315- >MSTRG.19207.1.p1 ID=MSTRG.19207.1.p1|Name=MSTRG.19207.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=4242bp|location=Sequence derived from alignment at sc0000216_pilon:552346..556315- (Clytia hemisphaerica_ch_hm2_pilon)
AACGATAACCAAAGCAATGCTGTTTTCAAGATTCTCTCGATGGATACAGA
CATTATAAAAGCACAAATTAAAGAATATCTTCTATACGGAGATTATTCAA
ATAAAGCTACTATCGAAAAATACAAAGTCGTCACACCAGCGCTTATAGAT
CTCATTGCTAGAATTAATAAACACGACGAGAGGTGTATCAAAAAGAGAAA
AGCTGAACGAGGCCTTGGTGTTGCCACAACCTTCGGTGTTCATTTAGCAT
CTTCGAATGACCAGGATGGAAGTTCTGAGACGCAAGTGAACAAGAAAACA
GAGATGTCGAATCATTGGAAGGAGCACTTAACCGCGTTAACTCTTTCTGA
TGATTTCAAACTTTTTCCTGCAGAGATGCAAAAAGTGTTATTGTATATCT
CGAATCTTCGTGAAGACCTCATTGAAATTTCTAAGACACTAAAAATTAAC
TCAAAGCGAGGAAGCCCTACATCTAGTACACACCTTCTAAGCACAAAATC
ATCCTTGGTAAAACATCAGAAAGCAAAAAAGAATGATCCAAAGAAAGTTC
TACTGGCCACAAAATTGAAATATGAAAAAGACATACAGTTGGTTAGGAAA
GAGAATGCGGAATTGATGGCTACAATTCGACGATTACGTTTATCTAAGAA
AGTTTTACAAACGTGCAAGGAGGCTGATAAAAAAAAGCTGACAGTGAAAA
TTCGAAAAACAAGATCGGCCGTAGAAAGAACATCACACCATCTGAGGGCC
GTCGAGAGCGAGAAGTTGGAGACTGAAATCGTATTGGCGGAGTTAAAGAT
TAAAGCTGAGGCGGAGATTAGGGCGTTGAATGCGGCAAACGAGGTGGAGA
TTAATAAGTATAAATTGAAAATACGGGCAATGACTTTGGATTGTAAGGCG
AAAGATGATCACGTGACCAAATTGGAAGATAAAATCAAAACGATGGAACG
TCGTTTCCATAACGATTTGGTTGCAATGGAAATACATTATAAAGGAAAAC
TCGAAGAAGAGTTACGTAATCGCAAATGGAGTGTCCGCTTAAAACGCACG
CTCGCTTGCGGACGATATTTTGAGAATCGCCGTACAGAACAGTTCTATCG
CGAGCATACAGCACATAGCCAGGGACGTACGGAAGAGTTTTAAATGGCTG
ACGTACAGGATGAAAGAATACTCGGTGCAGAAACCAACGACATTCGAGAA
CGCACGGCAAATAATCAAAACACAGTCGATCATACCGAATCAAGTGTTAC
TGACCCCGGACAAACTGATCTCCCGAATGATAGCACCGTACATTACCACC
TGACAGATGTAGACGCTCACCCTGATCAGCATATAGAAAACCTACCGATA
CCTCATGTTGATGATGGCACTCGTACGATTCGTAGAAGTGACAGTCAATC
ACGACACCGATTAACCAACCCGATGATCACATTAACACCATCGGGAATCG
AGACGTTGTTTCAAGGTATAACTAATCATGTGTTACCACCACCTGCCGAC
TTTGCAGATGAGACTAATAATGAACCACTTGAGGGCGGTGCTGAGTGTGT
TACCGCCCAATCAACCGGTTTATCTCTTGATGAAGGCGCCCTTATCGAGG
AGACAAGTTTAGTTCTACCACCGCCAGAACCTATCATGACTAGTGAAACT
TATGAAATTGACCACAAAATAAAAACTGATAAAATTCTCAACGTGCTGCA
GGGAGAAGGCTCAAAGAACTGGGAACCGGAAGAACTGGGTCAAAATGAAG
TTACTGAGTCACATATAGCTAACGAGTCGCTTCGATCACGTGATGTTAAT
GAGATATACGAAGCTCACGAGTCAAATGACACCAGTGAGTCACATAAAGC
TAGTGACACACAAATAGCTAACGAGTCACTTCAATCAACTAGCACTCTTC
TAGATCCAAAAAATGATAGTCAAACATCTCAAGCTACAATCAAAGCAACT
GAGACTGATGAAACCCTGGACACATTGAAACAAGAGTCGGGGTTAAGGCC
CCATATTCACCAAGTGATTGGAGAAGAAGATGATGAGATGCAACAAAAAC
CAAGCGAAGATAGAGAGCTTGTTCTTAGGGTTCATGCAGCGCCCATTGTG
GATAGTGAAGCATCTCTGAAGAACGATAACCAAAGCAATGCTGTTTTCAA
GATTCTCTCGATGGATACAGACATTATAAAAGCACAAATTAAAGAATATC
TTCTATACGGAGATTATTCAAATAAAGCTACTATCGAAAAATACAAAGTC
GTCACACCAGCGCTTATAGATCTCATTGCTAGAATTAATAAACACGACGA
GAGGTGTATCAAAAAGAGAAAAGCTGAACGAGGCCTTGGTGTTGCCACAA
CCTTCGGTGTTCATTTAGCATCTTCGAATGACCAGGATGGAAGTTCTGAG
ACGCAAGTGAACAAGAAAACAGAGATGTCGAATCATTGGAAGGAGCACTT
AACCGCGTTAACTCTTTCTGATGATTTCAAACTTTTTCCTGCAGAGATGC
AAAAAGTGTTATTGTATATCTCGAATCTTCGTGAAGACCTCATTGAAATT
TCTAAGACACTAAAAATTAACTCAAAGCGAGGAAGCCCTACATCTAGTAC
ACACCTTCTAAGCACAAAATCATCCTTGGTAAAACATCAGAAAGCAAAAA
AGAATGATCCAAAGAAAGTTCTACTGGCCACAAAATTGAAATATGAAAAA
GACATACAGTTGGTTAGGAAAGAGAATGCGGAATTGATGGCTACAATTCG
ACGATTACGTTTATCTAAGAAAGTTTTACAAACGTGCAAGGAGGCTGATA
AAAAAAAGCTGACAGTGAAAATTCGAAAAACAAGATCGGCCGTAGAAAGA
ACATCACACCATCTGAGGGCCGTCGAGAGCGAGAAGTTGGAGACTGAAAT
CGTATTGGCGGAGTTAAAGATTAAAGCTGAGGCGGAGATTAGGGCGTTGA
ATGCGGCAAACGAGGTGGAGATTAATAAGTATAAATTGAAAATACGGGCA
ATGACTTTGGATTGTAAGGCGAAAGATGATCACGTGACCAAATTGGAAGA
TAAAATCAAAACGATGGAACGTCGTTTCCATAACGATTTGGTTGCAATGG
AAATACATTATAAAGGAAAACTCGAAGAAGAGTTACGTAATCGCAAATGG
AGTGTCCGCTTAAAACGCACGCTCGCTTGCGGACGATATTTTGAGAATCG
CCGTACAGAACAGTTCTATCGCGAGCATACAGCACATAGCCAGGGACGTA
CGGAAGAGTTTTAAATGGCTGACGTACAGGATGAAAGAATACTCGGTGCA
GAAACCAACGACATTCGAGAACGCACGGCAAATAATCAAAACACAGTCGA
TCATACCGAATCAAGTGTTACTGACCCCGGACAAACTGATCTCCCGAATG
ATAGCACCGTACATTACCACCTGACAGATGTAGACGCTCACCCTGATCAG
CATATAGAAAACCTACCGATACCTCATGTTGATGATGGCACTCGTACGAT
TCGTAGAAGTGACAGTCAATCACGACACCGATTAACCAACCCGATGATCA
CATTAACACCATCGGGAATCGAGACGTTGTTTCAAGGTATAACTAATCAT
GTGTTACCACCACCTGCCGACTTTGCAGATGAGACTAATAATGAACCACT
TGAGGGCGGTGCTGAGTGTGTTACCGCCCAATCAACCGGTTTATCTCTTG
ATGAAGGCGCCCTTATCGAGGAGACAAGTTTAGTTCTACCACCGCCAGAA
CCTATCATGACTAGTGAAACTTATGAAATTGACCACAAAATAAAAACTGA
TAAAATTCTCAACGTGCTGCAGGGAGAAGGCTCAAAGAACTGGGAACCGG
AAGAACTGGGTCAAAATGAAGTTACTGAGTCACATATAGCTAACGAGTCG
CTTCGATCACGTGATGTTAATGAGATATACGAAGCTCACGAGTCAAATGA
CACCAGTGAGTCACATAAAGCTAGTGACACACAAATAGCTAACGAGTCAC
TTCAATCAACTAGCACTCTTCTAGATCCAAAAAATGATAGTCAAACATCT
CAAGCTACAATCAAAGCAACTGAGACTGATGAAACCCTGGACACATTGAA
ACAAGAGTCGGGGTTAAGGCCCCATATTCACCAAGTGATTGGAGAAGAAG
ATGATGAGATGCAACAAAAACCAAGCGAAGATAGAGAGCTTGTTCTTAGG
GTTCATGCAGCGCCCATTGTGGATAGTGAAGCATCTCTGAAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000216_pilon | genome | sc0000216_pilon:552346..556315 - |
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