MSTRG.19202.1.p1 (mRNA) -

Overview
NameMSTRG.19202.1.p1
Unique NameMSTRG.19202.1.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000216_pilon:518781..520026+

Legend: exonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.19202.1.p1 ID=MSTRG.19202.1.p1|Name=MSTRG.19202.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1246bp|location=Sequence derived from alignment at sc0000216_pilon:518781..520026+ (Clytia hemisphaerica_ch_hm2_pilon)
TTTTCAGATAAAACGAAACGTTCCAAACAATCCAACAATGTCAATATTGT
TACACAACAACAGACACCAGAATGGACAGATGCAGAATTACAACAAAAAC
TTATCGACATTGCTGAATCATCATCATCGAGTTCCCACCCAACTAAAGCA
TTGGAATTTCCAAGTCACTTGACAGCCAAACAACGAGCATTAGTACACGA
AAAAGCTGAAGAGCTCGGCTTAAGTCATCAAAGTATCGGTGAGGGCCAAC
AAAGACGAATCGTAGTTgataagaagaaaaagaaagaaactgtGGATGTT
GTGAGCAGTGTTGGTAAGAGACTAATCAATCTACACAAGCACTTTTACCG
TTATTGatgggcaaaaaaaaatttaaagtttcaaaatgaATAAGCTTTTA
GGCTTTCTGTTCTTCATATTTTTGTTCTTTCCCCAAAAAAGGGGAAGGCA
TTccttttcaaagtcaaataaaaTTGGGTGTAGCCAGGATTTTTGAAACT
CAGCATTGGTGAGCTGTTAGTAAAACAGGTCCCATGTTATCGATGTATAG
TTTGGCCTCAAACTGTACTTGATTTAATCGCTAGTTTTTGACTAATGTGA
TTTCCTCTCTTCTTTTCAGCCCAACATGGAGAACTATCTGAAGCCACGTG
TCTAACATGCTCAGCACGCATGCCTAAAAGCAACCTACAACTTCATTCAA
TCAGATGTTTCACGAAAGCAGCAACTGAAAAGACCGTTCAAGAGAATGGG
ACCACTACAAGTGGAGCTCGTCCTAAAATGTCAAGTAAGAGTAacgcaaa
gaaaaagaaaagcaagACTAACGAGAACACAAAAAGTAAAGGTGGGCCGG
CAGACCCTGATGAAGATATTGATAGTCTGCTGGAAGAGTTCACCAAAATG
AACAATTCATGTGGTTTTGGCCAATGCAAAATAAGCATCAAAACTCTAGG
CCAGAAATGCACTTTCTGTTCCAAGATGTTTTGTTTGACACATCATATGG
CGGAGATTCACGGTTGTGGTCATGATATACGCATGCGCGCTAGACAAGAT
ATTGCAAAGTATGGCAGCGCAAAGCCTACACCCATGAACAGGACAAAGAA
AGTTCAAGTGCAAAAGAAGTTAGATAAGAAATTGGATGAGCTGCAAGGGG
ACAGAAAAAGGAAAACTAAGAAGAAATGAAATCCTTTGCAGTTTTGTTGG
GTTCATTTTGTTAACATCCCTGGCTTTTGATTGGTTTTGAGAAAGg

Coding sequence (CDS) from alignment at sc0000216_pilon:518781..520026+

>MSTRG.19202.1.p1 ID=MSTRG.19202.1.p1|Name=MSTRG.19202.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1746bp|location=Sequence derived from alignment at sc0000216_pilon:518781..520026+ (Clytia hemisphaerica_ch_hm2_pilon)
TTTTCAGATAAAACGAAACGTTCCAAACAATCCAACAATGTCAATATTGT
TACACAACAACAGACACCAGAATGGACAGATGCAGAATTACAACAAAAAC
TTATCGACATTGCTGAATCATCATCATCGAGTTCCCACCCAACTAAAGCA
TTGGAATTTCCAAGTCACTTGACAGCCAAACAACGAGCATTAGTACACGA
AAAAGCTGAAGAGCTCGGCTTAAGTCATCAAAGTATCGGTGAGGGCCAAC
AAAGACGAATCGTAGTTgataagaagaaaaagaaagaaactgtGGATGTT
GTGAGCAGTGTTGCCCAACATGGAGAACTATCTGAAGCCACGTGTCTAAC
ATGCTCAGCACGCATGCCTAAAAGCAACCTACAACTTCATTCAATCAGAT
GTTTCACGAAAGCAGCAACTGAAAAGACCGTTCAAGAGAATGGGACCACT
ACAAGTGGAGCTCGTCCTAAAATGTCAAGTAAGAGTAacgcaaagaaaaa
gaaaagcaagACTAACGAGAACACAAAAAGTAAAGGTGGGCCGGCAGACC
CTGATGAAGATATTGATAGTCTGCTGGAAGAGTTCACCAAAATGAACAAT
TCATGTGGTTTTGGCCAATGCAAAATAAGCATCAAAACTCTAGGCCAGAA
ATGCACTTTCTGTTCCAAGATGTTTTGTTTGACACATCATATGGCGGAGA
TTCACGGTTGTGGTCATGATATACGCATGCGCGCTAGACAAGATATTGCA
AAGTATGGCAGCGCAAAGCCTACACCCATGAACAGGACAAAGAAAGTTCA
AGTGCAAAAGAAGTTAGATAAGAAATTGGATGAGCTGCAAGGGGACAGAA
AAAGGAAAACTAAGAAGAAATGATTTTCAGATAAAACGAAACGTTCCAAA
CAATCCAACAATGTCAATATTGTTACACAACAACAGACACCAGAATGGAC
AGATGCAGAATTACAACAAAAACTTATCGACATTGCTGAATCATCATCAT
CGAGTTCCCACCCAACTAAAGCATTGGAATTTCCAAGTCACTTGACAGCC
AAACAACGAGCATTAGTACACGAAAAAGCTGAAGAGCTCGGCTTAAGTCA
TCAAAGTATCGGTGAGGGCCAACAAAGACGAATCGTAGTTgataagaaga
aaaagaaagaaactgtGGATGTTGTGAGCAGTGTTGCCCAACATGGAGAA
CTATCTGAAGCCACGTGTCTAACATGCTCAGCACGCATGCCTAAAAGCAA
CCTACAACTTCATTCAATCAGATGTTTCACGAAAGCAGCAACTGAAAAGA
CCGTTCAAGAGAATGGGACCACTACAAGTGGAGCTCGTCCTAAAATGTCA
AGTAAGAGTAacgcaaagaaaaagaaaagcaagACTAACGAGAACACAAA
AAGTAAAGGTGGGCCGGCAGACCCTGATGAAGATATTGATAGTCTGCTGG
AAGAGTTCACCAAAATGAACAATTCATGTGGTTTTGGCCAATGCAAAATA
AGCATCAAAACTCTAGGCCAGAAATGCACTTTCTGTTCCAAGATGTTTTG
TTTGACACATCATATGGCGGAGATTCACGGTTGTGGTCATGATATACGCA
TGCGCGCTAGACAAGATATTGCAAAGTATGGCAGCGCAAAGCCTACACCC
ATGAACAGGACAAAGAAAGTTCAAGTGCAAAAGAAGTTAGATAAGAAATT
GGATGAGCTGCAAGGGGACAGAAAAAGGAAAACTAAGAAGAAATGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.19202MSTRG.19202Clytia hemisphaerica_ch_hm2_pilongene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.19202.1.p1.exon1MSTRG.19202.1.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.19202.1.p1.exon2MSTRG.19202.1.p1.exon2Clytia hemisphaerica_ch_hm2_pilonexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.19202.1.p1MSTRG.19202.1.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000216_pilongenomesc0000216_pilon:518781..520026 +