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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000216_pilon:243478..247377+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.19192.1.p1 ID=MSTRG.19192.1.p1|Name=MSTRG.19192.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3900bp|location=Sequence derived from alignment at sc0000216_pilon:243478..247377+ (Clytia hemisphaerica_ch_hm2_pilon)
CCTAGCAacaaagatgacgtcattttatttGATATGATCTGTTTTGTTTA
TGCAATAATCATACAGTTTATTTAATTAGTTATTGATCTAAAACGAGATA
GAAGGATTAAGATTGTTAAAAAGAGTATACAGATAGAGTAATAGGGTTAC
CATAATGGTatcttagaataaaaattaaaaagattgcAAGCTACCAAGAT
TACAGTtctaatgtttttaaataagagtgatattgtttgcctACTCATCA
ATCATagttcacaagctttttcacattggtctggcacggatgtggagcaa
gattggtcagaaagaagaaaagaaaaacatttatatCAGCATATAGGTAG
GTAAGGGAAATTAAGGCAGTCAGATAGAGAGATGCTATGCCcaatggtaa
aacttcaaattaattcgctggaggatagAatcaagtaaagcagggccaaa
tttggaggttcttggatcactcgtgtcgttgaccaaaaaattgtcaaaaa
acggtcaaaatcttaataaagttaatttttgtcaaatttttgcatttttt
tgactttttgacttaaaatctcactggaaagactcacttttgattttttt
tgcttgaccatgaagcccaatccaattcctgcGTTAGACCGATTagaacg
atttctaactcaaattGGGCATACAGGAGggctcctacatagcccatgtc
tgatatatacgacattgggctcttccagaaaaaatccgttcatggggggt
ggaggatattatttttttcatgaatcacCCCTGGACATTTTGATATTTaa
cccctggacacgggttatacccctggacaaacatcaaatcaaccccgtgg
acacaaaaaaatacccctggacaatggaatttaccccctggacattgcta
ttttttggtattttttcaataccctggacaattcatcctccaccccccat
gaacagattttttctggaagagcccattggcacttaaagggttaagcaaG
TTTCGGAAAagcctttttttataaattgctGAGATGGTAGAACttttaac
tgattttcattagtttttatttgattttttccgGAAACAGAGACACAGGC
GACACAATGGTTTGATcggataagaataattttacaGAAAACGCGTTTAA
ATTTGTTATGAAACCGAAGTGTTTAGTATATCACGTATTGAAGCTATTTA
TTCAGTCGGCAACAcgaccgagtttatgtattgtGTTTTTCACgtcgacg
gagacggtaaggttctaatttgactaggtcatcacttttaccgtcctcga
ttttgcgggtcatcCCAAATCGCTTTAATcgctttaccgtcctcaaaagt
gcaaatacataaactcgctactgtATCGGAACGGCCAGCAGAACTTGCAT
CGCAtgaatcattttcaaaacaggCTAGGAATATTGCCCGTtagagtttt
atttttacataagtgttcccgtttcatatcaggacggtgtctacctattg
ttatattgtgctaatataagcaaaaaatgattttctattCCTTTTTCTGA
CTATCTTGccccacatctgtgtcaatccaatgtaaagaagcttgtgaatt
aaaatcgATGAGTAAGAAAAcggtatcactcttatttaaaaacaaaacct
ttaaggcaATACTTGTCATTTGGTTATAGTGTTACCGGTTGTACTTTGCG
TGAAAACCGTGTTATCTCGAAATTTTTGGTATGGTGCACTTTAAAGGAAA
TCACTAAATAAagtaaactctcgcttattcgagcTTCTATTATTccaatc
tttctataattcgaacatgTTATCAGTCATGAGAGAAACACTATTAAACT
GCTTTCTATAATTTCAATCTCTCTGCAATTCGAACGCAGAAGATTCCCCG
TTCAAGTTAGAATAGGCGAGAGACAACAACTGTACCACGCCTTTTTATTT
CATTCCAGGAACCAATATTAGAATTATCAacggaaaaaaatcaaaggagG
GCGACCAAAAGTATTTGATTCATCAACAACTGCAAAAAAGTTTGTATCAA
CGAAGATGCGATCCTTCACAAACGTGGTAATCATTATATTGATATTGATA
ATTTACAATGTCGCATTCACCACACAAATAGATTTCACAAATTTGAAATG
CACGGATCGTCGAAATGTCACTGTCATGATTAATTCTTTAGATTGGTTAC
AAGCTGAGAAGATTTTATTCTATATTTCAGAATTAGTTTTCACAGAAGAG
TGCTTCATGATTAATTTATATCTTAATGAGGAAGAGCGCATAGTTCAACT
AAGGAAAGATACAAATCTTAACAATATCGAAAGGAACTTCTTACTCAAAG
AAATAAATGGAGAAGGAAAATTTATGTTCACAGCAAATTTTATTGCACCG
TTAGAGGAACACAGAGTTATTCGAGTTATCGATAATCTTCGGAACGAGAA
AATCCAAGGAAATGGATCAATGAAGCAGTCATTCGTTTACTTAACAGACC
ATACCaatcaagagaaaatttacTCAAGTCTGAGATACCTCCAAGATGAA
ATGTCCTGGGATATTATTATCTACTGTCGAAGTTATCTGTGTCCATTTCA
AGGATGGATAGCACCACACAGACTTATATTCTTCCAACAAGAACGCGCTT
TTCAGGCGAGTGAATACAAAAACTTAATCGATGTAATCAAAGAACCAAAC
TACGACAGATATAAATTCTACCAAGCCTTAAAACTCGAACCAGAATTCTT
CAACGAAACATGTCTTCAAAACGTCAACAAAATTCATATTGCAATGAAAT
ACAATCAAGAGCTATATCTTCCTTTAGCATTGCGAATTGTTAAGCGAGAA
AACGAGAGAAGAAAACAAACCAATTCTACCATGAATCCACTTGAGATTAT
CTTTTACTCGAATCATATGTCTGATACACGATCTTGGGACGCTATTTTGG
ATAATTTACAACCCAAAGGTCAAAATGTCAAATTATTCGGAACATGGACA
AGGCATCCCTTATACGTCCGCAATAATTACTGGTACAATACTAAGCCAAA
TTATTCGGATTATTATGTTCCAGgagaattttatttcaatattctTGGAG
GTCAACTTTCGTCATTTGATTGTGAGTTTTTCCGAGGTTTTATAAGCATG
CAGAAGGTATATCGGATTGAGCAGTCTCCAAGAACTGATAGATGTTTCGA
TCGAGTCAAAGTACCAATGTTTGAAAAACCTGATGAACTTTATGGACTGA
TAAATAAATTTCTCTGTAAACACGGttaactctctctctctctaattcga
acacgAATCTGATCGAATGAAATTGATGGAAATCTAATACTTTTGAATAA
TAGAAAACATTTAACATTAAAGAGTTTCtgtaagttcgaattatagaaag
atttgaatgaaAGAGGTTTAGGATTACGCGTCCAGCGTAGTATATATGTT
AATGGAAATAAAGTTAGACTAAATTTTCACTAAATCTTAATTGTCAAACT
ACTGACTAAATCCTACTGAGATCTTCCCAAAAGTTTCCTTTATCTAATga
taatatttgattttttgaaaaggaagcCTCCAAAGTATTGAAGACATTGA
TCGAAGTTCAgattgaaaatctaaaaaaattctacagctatactaagtca
aaaaaaattctaacaaaacaaaagaaaatattactTGAACTATATTGAGT
ATAATGACAAACTAAAGCCCATTATTTTAAGTGTAGTGTGcactaatctt
tgtttgcttgccAGTTTTTCAACGAATGCTTCAATTTAAACATATTTTAT
CATATTTCTAAGATAATTCATAGCACTTGAATTGCTggtgaaattattga
aaaagttttagaaaatgaaCTTCTTATCCTTTGGTGCTGGAAACTTCACC
Coding sequence (CDS) from alignment at sc0000216_pilon:243478..247377+ >MSTRG.19192.1.p1 ID=MSTRG.19192.1.p1|Name=MSTRG.19192.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1224bp|location=Sequence derived from alignment at sc0000216_pilon:243478..247377+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGCGATCCTTCACAAACGTGGTAATCATTATATTGATATTGATAATTTA
CAATGTCGCATTCACCACACAAATAGATTTCACAAATTTGAAATGCACGG
ATCGTCGAAATGTCACTGTCATGATTAATTCTTTAGATTGGTTACAAGCT
GAGAAGATTTTATTCTATATTTCAGAATTAGTTTTCACAGAAGAGTGCTT
CATGATTAATTTATATCTTAATGAGGAAGAGCGCATAGTTCAACTAAGGA
AAGATACAAATCTTAACAATATCGAAAGGAACTTCTTACTCAAAGAAATA
AATGGAGAAGGAAAATTTATGTTCACAGCAAATTTTATTGCACCGTTAGA
GGAACACAGAGTTATTCGAGTTATCGATAATCTTCGGAACGAGAAAATCC
AAGGAAATGGATCAATGAAGCAGTCATTCGTTTACTTAACAGACCATACC
aatcaagagaaaatttacTCAAGTCTGAGATACCTCCAAGATGAAATGTC
CTGGGATATTATTATCTACTGTCGAAGTTATCTGTGTCCATTTCAAGGAT
GGATAGCACCACACAGACTTATATTCTTCCAACAAGAACGCGCTTTTCAG
GCGAGTGAATACAAAAACTTAATCGATGTAATCAAAGAACCAAACTACGA
CAGATATAAATTCTACCAAGCCTTAAAACTCGAACCAGAATTCTTCAACG
AAACATGTCTTCAAAACGTCAACAAAATTCATATTGCAATGAAATACAAT
CAAGAGCTATATCTTCCTTTAGCATTGCGAATTGTTAAGCGAGAAAACGA
GAGAAGAAAACAAACCAATTCTACCATGAATCCACTTGAGATTATCTTTT
ACTCGAATCATATGTCTGATACACGATCTTGGGACGCTATTTTGGATAAT
TTACAACCCAAAGGTCAAAATGTCAAATTATTCGGAACATGGACAAGGCA
TCCCTTATACGTCCGCAATAATTACTGGTACAATACTAAGCCAAATTATT
CGGATTATTATGTTCCAGgagaattttatttcaatattctTGGAGGTCAA
CTTTCGTCATTTGATTGTGAGTTTTTCCGAGGTTTTATAAGCATGCAGAA
GGTATATCGGATTGAGCAGTCTCCAAGAACTGATAGATGTTTCGATCGAG
TCAAAGTACCAATGTTTGAAAAACCTGATGAACTTTATGGACTGATAAAT
AAATTTCTCTGTAAACACGGttaa
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000216_pilon | genome | sc0000216_pilon:243478..247377 + |
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