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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000216_pilon:233618..236443+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.19191.1.p1 ID=MSTRG.19191.1.p1|Name=MSTRG.19191.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2826bp|location=Sequence derived from alignment at sc0000216_pilon:233618..236443+ (Clytia hemisphaerica_ch_hm2_pilon)
GTTGtattaatttgttttgaatatttcttaCCAAAGTTTAAGAATAAAAA
TGGAAACATTGAATGAAACATATCTGGGCAAGGTGATGATGAACCACTCT
AACATTACAACTTCAAATCACACGAACACCGATAGCTGTTTTCTTCACCA
AGATCAAAGAATACTAATAAATTGTCTGGTAAGTTCTTTGAAGATTGAAC
CAAACAGGTGACAAGTCCTAGACATATGTTGCGTGACGCATTTCGGAAAA
TTTGAATAATGCCAATCTAAAGATATCAGCTAAAAACTGATTTTAATGTC
ATGGAAAACATCgagagcccgggggggggggcactcgatttcgaaatgac
ggtatgtgccgcgaaaaatctgcttttcaaaatcgtacccttacagtgca
gttcaatctggctgaaaaggtacccttttagtgcattttctcttgcgAAT
CACCTAACCCTTATAGttcactatatttctcagctgtaaatctgcgtgaa
agaagaagcttcggaaattttctgtttcaaagaaaaactgagaaagtTAT
TCTTGTcggctgtaattatcagacaatagaaagtttttcaaacaaacgag
aagtaaaaacctttctttttaacaattaatttgaatttgttttaaaattg
cagtgcaatctcacagaaacacacccttaaattttgggatgctgaaaaac
cccactcTTAAGCGcagcacatgacgtaggccagatcatatgagtgcccc
cccccccctgggatcGAGAGAAGCAGAAAAGTAAGATCCAAATGATGTTA
TTATTGAAAAACGACGATAGGTTTCTAAAACACACGATACCAGTAGTTGG
AAATAAATCGACCTTACGCCTGAAAAAAGTAGTCAGTCGGACTTGGGGAT
GGGTTGAACAAcaagtgaaagtgaaaaaacGTAGAGGGGTTCTTTATTTC
ATGTAGCTTATTTTCGACATTTCAAagaacgatgacgtcatcagttggta
ttgatgcaggagttgtcattaaaaatacCAATTCAAATTTGGTACCACTA
GCAGAATTTCCAGTCAATTAGATAtaatatttcgaaatatttaTTTCTTA
CAGTTTGGAGTATCTGGTGGTATCAGCTGTCTTTGGATTCTTATAAACTA
CTTGGTGACAAGatcaaaactaattttggtATCAAACATTAAACAATCGA
TTCGGCTAAAGCGATGTCAACAAATTGGTATAATTGCAACCATagtgtgt
tttgtttttatcgTCTGTGATCTGCCTAGAAGATATGTGTGAAACAATGA
AAAGTGCGggaaaatatcagaaatatgaAGGATTCTTACAGTATGCATTG
TTTTGCTCTAGTCTCACTCTCTTCATCTACTTCACCTACATTTTTCTGAG
GAATTGTGTTCAGCttcaaaaaagacgaaaaagacCAATTAAAGACAGTT
CttctattttatcaaaattaaaacatgTCGATAGTGATATACCATGGCCT
GATGAAATCGAAAGCAAATGGttccaaacaaaacaaaacttggAACCGAT
CCTTCGAAATATAAAGTCAAGTTTTGTCATACCATTGCAACCATCAGAAT
TAACTTCTATTCTCACGGGGAGTTCAATGGAACGTTTCAATGTACCTCTA
GATTTTATGGACGATAAATATTTCGGAAATTCTCGACACCTAGGCAGTGG
ACATGCTTTATTAAGTGATCACGATCTAATGATCTACAATGGTTATGAAG
AAGCAAGTTTCAATGCAGAAAGTTACTACTTCATAGAAACGCAGTGTGAC
AATTTATCTCCTGGGTTTGTGAATGTTATTCGGAACCAAACAAACTCAAG
AGTATCAGGGAAGGAGATCGTTGAAAAGGTCTATGATTCGGTTATGAACA
CGAAAATTAAGACATTGCAGGGCTTTCGCATATTAACAAGAaataaaacg
tggaaatttatGATGGATAAAAATATAAGCTACATTAAGAAATCAGGCCC
TGCAGTATGCATCAATTATTATATGCCTTTCTGTCCGATCATACGCGCTG
ATATAACTTTCGGTATACAATGCACAGGGGAATGGCCTCCTACATCTGAT
TGGCCCACACGGTCACGTGCATGGCCGGACGAAACTGTAGTTGATTTCAT
CGTTAAACAAGGTTTTCATTTAGTTCCCAAATCTCAACCAGACGATATAG
AAGGGGCCACGTGGAGATATTCGTTTTCAACTGCTGAAgttgttttatca
aaatggATATCACCGGTGGCGAGAAAATGTTTCGTcgctttaaaaattat
tggtaAGGATTTTTTGAAACCAAGGTGTAAGAGTTTCAAgtcatattttt
tgaaaatgattttctatAATGTGTTGGAAAAAACAGACGAAAATAAATGG
GTCGAAGCAAATATGGAGAGTTGTTTTCATTTATTGCTAGATGGTGTTAT
TAAAAGCATTGAGTATGAAAACTGTCCACATTACTGGATTCCTGAAATca
acttgttcaaaaatttcaCCAGTAATGACTTCAAAGCCCTTAAGGAAATC
TTGGTGGAAATAAAACAAAGCCCTCAGAGTTACATTCAATGTCTTATGAA
GGGAGTTTAGGCCATATGACAAAAGAACTTATTTAAAACTCTgtggtcaa
agcaaaatttCCCCCCTTAGTCGAAACATAGTCactataaaaacactggt
ctggaaggcttttgtctctttttattgttaaaagatggagctgatgtacc
aaaatcgatttattttgcaaactttttgatcatgtgattagaaaatagac
cgatcccaagaggagattttgataac Coding sequence (CDS) from alignment at sc0000216_pilon:233618..236443+ >MSTRG.19191.1.p1 ID=MSTRG.19191.1.p1|Name=MSTRG.19191.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1326bp|location=Sequence derived from alignment at sc0000216_pilon:233618..236443+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTGTGAAACAATGAAAAGTGCGggaaaatatcagaaatatgaAGGATT
CTTACAGTATGCATTGTTTTGCTCTAGTCTCACTCTCTTCATCTACTTCA
CCTACATTTTTCTGAGGAATTGTGTTCAGCttcaaaaaagacgaaaaaga
cCAATTAAAGACAGTTCttctattttatcaaaattaaaacatgTCGATAG
TGATATACCATGGCCTGATGAAATCGAAAGCAAATGGttccaaacaaaac
aaaacttggAACCGATCCTTCGAAATATAAAGTCAAGTTTTGTCATACCA
TTGCAACCATCAGAATTAACTTCTATTCTCACGGGGAGTTCAATGGAACG
TTTCAATGTACCTCTAGATTTTATGGACGATAAATATTTCGGAAATTCTC
GACACCTAGGCAGTGGACATGCTTTATTAAGTGATCACGATCTAATGATC
TACAATGGTTATGAAGAAGCAAGTTTCAATGCAGAAAGTTACTACTTCAT
AGAAACGCAGTGTGACAATTTATCTCCTGGGTTTGTGAATGTTATTCGGA
ACCAAACAAACTCAAGAGTATCAGGGAAGGAGATCGTTGAAAAGGTCTAT
GATTCGGTTATGAACACGAAAATTAAGACATTGCAGGGCTTTCGCATATT
AACAAGAaataaaacgtggaaatttatGATGGATAAAAATATAAGCTACA
TTAAGAAATCAGGCCCTGCAGTATGCATCAATTATTATATGCCTTTCTGT
CCGATCATACGCGCTGATATAACTTTCGGTATACAATGCACAGGGGAATG
GCCTCCTACATCTGATTGGCCCACACGGTCACGTGCATGGCCGGACGAAA
CTGTAGTTGATTTCATCGTTAAACAAGGTTTTCATTTAGTTCCCAAATCT
CAACCAGACGATATAGAAGGGGCCACGTGGAGATATTCGTTTTCAACTGC
TGAAgttgttttatcaaaatggATATCACCGGTGGCGAGAAAATGTTTCG
TcgctttaaaaattattggtaAGGATTTTTTGAAACCAAGGTGTAAGAGT
TTCAAgtcatattttttgaaaatgattttctatAATGTGTTGGAAAAAAC
AGACGAAAATAAATGGGTCGAAGCAAATATGGAGAGTTGTTTTCATTTAT
TGCTAGATGGTGTTATTAAAAGCATTGAGTATGAAAACTGTCCACATTAC
TGGATTCCTGAAATcaacttgttcaaaaatttcaCCAGTAATGACTTCAA
AGCCCTTAAGGAAATCTTGGTGGAAATAAAACAAAGCCCTCAGAGTTACA
TTCAATGTCTTATGAAGGGAGTTTAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000216_pilon | genome | sc0000216_pilon:233618..236443 + |
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