MSTRG.18970.2.p1 (mRNA) -

Overview
NameMSTRG.18970.2.p1
Unique NameMSTRG.18970.2.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000210_pilon:567465..569833-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.18970.2.p1 ID=MSTRG.18970.2.p1|Name=MSTRG.18970.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2369bp|location=Sequence derived from alignment at sc0000210_pilon:567465..569833- (Clytia hemisphaerica_ch_hm2_pilon)
TTTATTTTTTTAGGGGAAAAAATGAAATTAAAATGGAGATAAAATGCCAC
TACTGTGAAGAAGTATTGGAGCATAACGTTGTTGCTTTAATTAAACATTA
CAAGAAGCATGATATAACCACTGATAATTCTCTTTTTAAAACGTTTTTGT
TAACTGCTACTAGACCGCTGACGGTTTTAGACAAGCCTAATTTATGTTTT
GTTTGCGGAAAAGAATTTACCGTAGAGTTTTTGTTAAGAAAACATCAACT
CGAGTCTCACCCTTATCTAGGATATTCTAAGGAAATTTTCGATCGAGAGG
TGGTTAAGAACCTTGTTAAATATGAATATTCTATGCTGGATGCCACTAAC
AACAGAGGAACCGCTACGTCTTTTAAAGTATCAGCAAGCAGAACTTCTTA
TAGGGCGAATCGTGAACAGGGTATTTATTGGTACAATTCAGACGCGGGAG
AACTATTTTTGTCTGCTGCCAAGAAATGCATAGATTGGTGAGTAATATTT
TTCCTAAAGGTTTTTTAAAAAAAGTTTTATGGATTTCGTTATTGTTATTG
TTATTGTTTTTATTTTTATTAGGATGCGCTTTCAAACTGGAACAGAAGAA
CTGAAAATATTTACGAATTTGATGTTTGGTTGGCAAAATTTTTTTAAGAA
CGACGGTAGTATATTGGGTGGAGGCGAAGAGGCCTTTGACGTTGTAAGAG
ATGGAGGGGGTACTAATTCTAACGTGAGCACATCTGTAAAGCGAAATTAC
GGATTGTATGGGGCGGGATATCAAAAGTTAAAATCTGCTATAGAAAGCAA
AATACTTGCCCCCAGCGGTAATATGAGAGGCTCTCAATGGGGTTTTCATT
CTTTTAAATATTTTAACTTGGTTTCTTCATTGAGCGGTTCTGGGGACGAA
GCCTTAACAAAAATAGTCTCTGGTCCCGAAGAAGAAGATGAGGAAGAAAA
AGCGTTCGAGTTTCGAAAAAGAGCCGAAAGACCCAAACCAAATTTGTGGT
CGATTGATACCATATTGCAAGGTAAAAGAAAATCAGAAGAACCACCATCA
GTAAAAGAAGAGCACAGACAAGCTAAAGTTCGCTTAATGACGTCTCAACA
CGCCTCCACCAGCAAAGGCAAACATCGTGCGGCTAAAAATTTGGTAAGCT
ATACTCTTCTTAATTTAACCGGCGACTAAGTAAATTGTGATGTTTTAACT
TGATGCGTTTTTTATTTTATTTTCAGAATTCATTTTTCGATAAGTGTACA
GTGGACAGAAGATCAGAAACACAAATCGAAAGAAACAAGAGTGCAGTTGA
AGTTTGAAGTTACTATGGTTTAGAGTTAGAGGAGAAGCGTATTTTCGCGC
AGTCGAAGATAGAGCGAAAATTAGTTTCTCCGCGATCTCACACTCAAATA
GTAGGGCGTCAGGGCGTGATCGTGAATGGGCGGACGGGCGTCCGAGAGAC
ATGGGTTCGAGTACGCATGCTCAGATGAGACATGTATGGGTTTAAAAATG
GTAGCCCTTTTTCAAAACAACATCTCGGGTCGAGGGCTCTGGACATTAAC
CTTACTTACATAAATCTTATATTTTATTTTCATGTGATGCATCGACGATG
ACCGGAGGCAACGAAACGGGATATGTATCCAGAAAAACACTTCCGATTCT
ATAGCCGACTAAAGAGCAACCGGACAAATCAGATACACGATAAAAACTCG
ATAACGAACAACCACTGACAACACCTGCAAGAGAAGAATCCGAGCATTCC
GAACTCGAAAGACGAAACGATATGATACGATATCCTAACATTGGTCGATG
TTATCATATATTCCCATCGAAAGAACTGACGAAATATACGTAATTACAAA
CGAATTAACGAGAGGCGGTAATTATGAACGATTTAATGAGAGATCGTATT
TGCGAGAGACTCAAGAGTAGTGCCTTAACCCTCGAGGACGCGACCGTGCA
TTGGGACGAGGAATATGTATTTTCCTCTCACGAAGGGGTTTGTGGCGCAT
CCGGCCGGTTCGCAATCACTACTTTCTACGAAATATTACCACGTTTAAAT
TTACAACAATGACACTCGAGCCAAGAATTTATTATACAGGCAGTACTCAA
CGAATAAACTTCTTGTATTTTATCCGCTGTCCAGAGTATCCTCAGTGCTT
GCAAAGACCCGTCCACCAAATTATAAAGAAAACACTGTGTCTTTTCTTCT
GTGGGTATGGGAGTCGGGAGTTTAGGGTGTGGGAAGTTACTATGGTTTAG
AGTTAGAGGAGAAGTTGATTTTTCCAATTGCAAGGGCTAATTTTCTTAAA
GGCAGCATGATGTGTTATTAGCTCTGCACAAATTCAATTATGTATAATGT
GAAAAAATTACTCACTAGT

Coding sequence (CDS) from alignment at sc0000210_pilon:567465..569833-

>MSTRG.18970.2.p1 ID=MSTRG.18970.2.p1|Name=MSTRG.18970.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=651bp|location=Sequence derived from alignment at sc0000210_pilon:567465..569833- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGATTTCGTTATTGTTATTGTTATTGTTTTTATTTTTATTAGGATGCG
CTTTCAAACTGGAACAGAAGAACTGAAAATATTTACGAATTTGATGTTTG
GTTGGCAAAATTTTTTTAAGAACGACGGTAGTATATTGGGTGGAGGCGAA
GAGGCCTTTGACGTTGTAAGAGATGGAGGGGGTACTAATTCTAACGTGAG
CACATCTGTAAAGCGAAATTACGGATTGTATGGGGCGGGATATCAAAAGT
TAAAATCTGCTATAGAAAGCAAAATACTTGCCCCCAGCGGTAATATGAGA
GGCTCTCAATGGGGTTTTCATTCTTTTAAATATTTTAACTTGGTTTCTTC
ATTGAGCGGTTCTGGGGACGAAGCCTTAACAAAAATAGTCTCTGGTCCCG
AAGAAGAAGATGAGGAAGAAAAAGCGTTCGAGTTTCGAAAAAGAGCCGAA
AGACCCAAACCAAATTTGTGGTCGATTGATACCATATTGCAAGGTAAAAG
AAAATCAGAAGAACCACCATCAGTAAAAGAAGAGCACAGACAAGCTAAAG
TTCGCTTAATGACGTCTCAACACGCCTCCACCAGCAAAGGCAAACATCGT
GCGGCTAAAAATTTGGTAAGCTATACTCTTCTTAATTTAACCGGCGACTA
A
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.18970MSTRG.18970Clytia hemisphaerica_ch_hm2_pilongene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.18970.2.p1.exon1MSTRG.18970.2.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.18970.2.p1MSTRG.18970.2.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000210_pilongenomesc0000210_pilon:567465..569833 -