MSTRG.18958.1.p1 (mRNA) -

Overview
NameMSTRG.18958.1.p1
Unique NameMSTRG.18958.1.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000210_pilon:478770..479747+

Legend: exonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.18958.1.p1 ID=MSTRG.18958.1.p1|Name=MSTRG.18958.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=978bp|location=Sequence derived from alignment at sc0000210_pilon:478770..479747+ (Clytia hemisphaerica_ch_hm2_pilon)
AAATGGGCTTTTAATTGTAATGGCGCACGGCTGGAGGAGTGAAGATGAAG
GAGATGCGCCACCAATGTTCACCATAGCCATCGTTTGTATAATGGTTTTA
ATTGCcatcttcttcttcgttttattttgttacgTTTACAAGAAACATTC
GGTTGCACGACAACAGATAACTAACCAAATTCAACAAGGCGTTCAACCTC
ACTTTCAACAAGGCAATACAATGATGAATCCAGCTTTTCACCAATATAAC
ACCGATGGTAAGTTGTTTACTATTATACTCTCTTTGATGGATCCTTCATT
TCAGGCAAAATAATCCCAAGGTTCACAAAAACCTGTACACTTTCTAGAGC
ATACCAACTtaactaaaaaaatgaaaattaaaaaaagggacAATTTATGC
TGGCAAAACAGACCAAATTATTGGAGAAAATTTCTTTCAGGGTCATAAAA
AACTCGAAAAGGAATAATTTTTGCCTCGGACATCGCCACGTTCAACTCTA
GTACCCTTAGGAAAATCTCCCAACATGACATTTTAATTCTTCTCAAGTAA
GTATTTTATGACCGTACTCTCTTTGTTGTATCCTTTTAATTCCCGTCAAA
GAATCTAGTCAGTCTAGTTCAGTTTAAAAAGatttaaatgttttcttttc
aaaacacgaCAAAAGGTCGGAGAAATTCATCATAACGCAAAACTAATACC
CCTGGGAAAATCTCCCTACATGACATTTTCATTCTTCTCATGACAGGCTT
TGCACCACCTCTCACAACACTGCCAAACAACAACGTAATGTTTGCTCCGC
CACCTGGACCACCACCTGGACCACCACCCAgctacaaccaaaatttcatg
ccacAATCTGCAGGACAACCGACAGGGCTCTTCCAAATGAACACGAAATG
GATCTAGCCATAATTTTGATAGTTAATACCATCTTAATAACCAGAAATTA
TTGCACACGAAAAATTACAACCTTAATc

Coding sequence (CDS) from alignment at sc0000210_pilon:478770..479747+

>MSTRG.18958.1.p1 ID=MSTRG.18958.1.p1|Name=MSTRG.18958.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=834bp|location=Sequence derived from alignment at sc0000210_pilon:478770..479747+ (Clytia hemisphaerica_ch_hm2_pilon)
AATGGGCTTTTAATTGTAATGGCGCACGGCTGGAGGAGTGAAGATGAAGG
AGATGCGCCACCAATGTTCACCATAGCCATCGTTTGTATAATGGTTTTAA
TTGCcatcttcttcttcgttttattttgttacgTTTACAAGAAACATTCG
GTTGCACGACAACAGATAACTAACCAAATTCAACAAGGCGTTCAACCTCA
CTTTCAACAAGGCAATACAATGATGAATCCAGCTTTTCACCAATATAACA
CCGATGGCTTTGCACCACCTCTCACAACACTGCCAAACAACAACGTAATG
TTTGCTCCGCCACCTGGACCACCACCTGGACCACCACCCAgctacaacca
aaatttcatgccacAATCTGCAGGACAACCGACAGGGCTCTTCCAAATGA
ACACGAAATGGATCTAGAATGGGCTTTTAATTGTAATGGCGCACGGCTGG
AGGAGTGAAGATGAAGGAGATGCGCCACCAATGTTCACCATAGCCATCGT
TTGTATAATGGTTTTAATTGCcatcttcttcttcgttttattttgttacg
TTTACAAGAAACATTCGGTTGCACGACAACAGATAACTAACCAAATTCAA
CAAGGCGTTCAACCTCACTTTCAACAAGGCAATACAATGATGAATCCAGC
TTTTCACCAATATAACACCGATGGCTTTGCACCACCTCTCACAACACTGC
CAAACAACAACGTAATGTTTGCTCCGCCACCTGGACCACCACCTGGACCA
CCACCCAgctacaaccaaaatttcatgccacAATCTGCAGGACAACCGAC
AGGGCTCTTCCAAATGAACACGAAATGGATCTAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.18958MSTRG.18958Clytia hemisphaerica_ch_hm2_pilongene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.18958.1.p1.exon1MSTRG.18958.1.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.18958.1.p1.exon2MSTRG.18958.1.p1.exon2Clytia hemisphaerica_ch_hm2_pilonexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.18958.1.p1MSTRG.18958.1.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000210_pilongenomesc0000210_pilon:478770..479747 +