MSTRG.18950.2.p1 (mRNA) -

Overview
NameMSTRG.18950.2.p1
Unique NameMSTRG.18950.2.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000210_pilon:422691..424532-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.18950.2.p1 ID=MSTRG.18950.2.p1|Name=MSTRG.18950.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1842bp|location=Sequence derived from alignment at sc0000210_pilon:422691..424532- (Clytia hemisphaerica_ch_hm2_pilon)
TGAAAAAGAAAACACTGCGTTAAATCTACAGGTGTAACGATTTTAACAGT
TTAACTGTAACGTCATCATTGACATTATGAACTCGAGGCCTGGTACTCGG
CAATCTTTTCTGCCTTCTTCAGTGGAAAGATGTACTGAAGATATAAATAC
TTGGGGAAAGCAAAGTATAATACCTTGGAGGAAGAAAAAAATGGAAAAAC
CATTTGACGAATCTTATCAAGGATTTGATGACTCTGGAAAGTATTACACC
AGTTTCTGTCACAGTTTGTTTTCTGATCATAAAATTTCAGCTTACAGCTA
CAACGAGGAAACACATAAATTGGAAGCCAGTTTGATCAAGTTTAAAGCAA
GTTGCCGAGTTTGCTATGATCCTAAAACAACCCGTTGGTTCGATTATAGA
ATTACTCAACCAAAGTTATGGTTGGATAAAGATGACACATTGGAAATACG
CAGTGATATGTTTAAAGAATATTTTGGGACATCAACGAAATTAAAATCTA
AAGATGTGAGTAAAGACAAAATTGTTCAATTATCCATTGGGTATAAATGG
GGCTCGGTTTATAATTATCTTGATCGGTGGATTTTTAAGACTGAGAAACA
TGGTAAATTCTTCATCATCTTGTTGCGAGATCAGGACAGCGGGACCCATT
ATCTGTATTTGTTTAGTTTTGATGAGAAAGGAATATCTCATTTTAAGACA
ATAACAATTAAAGATCACGCTTTGTATGAGCGATTTAATGGTAGGAATGT
TCGGCAAAATGTGTTCTTAAATTTTGATGCTGGGCATTTCTACATTATCG
GTCAAGAAAAGAGATTCAATAAACCAGTGAACGGAGAATCCAAGTGCTAT
GAAGACTATACAAATTCTGGTTGGATGAGCGGTTTCAATTTTGAAGGAAA
TAAAATATTTATGTTTCCGATTATAAAACAGGAAAAAGAACACCCTCATT
ATTTTCAATATATAGCACAATGCAACGGTTCACAATTTCTTGTGGTTTGG
CTTCACACACTTGAAGTCGAGATCTTTGATGCCACTGTCGATGGGATGAT
CAGGTTGAAGAAATTCCCACTCTCGATGAAGGAATCCGATCATATTCCGT
ATAATCCATTTCAAATATTACTGGGGAAAAAACAGCTACTTTTATCTTTG
AAATACTGGCTTATGGACAACGGTAATGTAGTTGCTTTTTATGACTTGGA
CTCTGCAAAGCTAGTATTTACCTATGAACATCCTCATTACAAAATGATTG
AATACCATGATCTGAATTTTGAAACTAAAGAGTTGTTTGTGACCAGATAT
GGAGGATGGTCCAAAACAATGCTGGAAGTCAGTAAAGTTGAGGGTAACTT
TTTTTCTTGAGTTAAACGCAAGGATTCACTATGCAGCAACACTATTGTAT
TGGCATTATTTGGAATTTATTATTAGAAGTAATTATTGCCACTGCAGGGA
GTCTAAAGCGACCGAGGACGGCAGTTATAGTTTCACGCACAAAGAACTTG
GGTTATCTGATATCCCGATGGCGTATTGGCGACCACCCACGCTAAAGCTC
TAAAGGAGTGGACCAATATCTAGATCAGCGGCCTTGTTCGAAAGGTGAAG
TAAATTTTGGCAGGATTTCCTAACAAAGAAATCACGTAACAACAATGCGT
GGAGCATTAAACAAGCAAATCCATGTAAGTAATATCAAATTTACATATAT
CAAACCAATTAAAAATCGACTCCAGGAAAACCTAGAATTTAAAATCTACT
CTTATTTTCAGTAATCGCTGACATCAAAGAACACCTTCTGTTCCTCCATG
CGTGGACAGGATGTGATACAACATCAAATATATTCAATAAAG

Coding sequence (CDS) from alignment at sc0000210_pilon:422691..424532-

>MSTRG.18950.2.p1 ID=MSTRG.18950.2.p1|Name=MSTRG.18950.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1284bp|location=Sequence derived from alignment at sc0000210_pilon:422691..424532- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAACTCGAGGCCTGGTACTCGGCAATCTTTTCTGCCTTCTTCAGTGGA
AAGATGTACTGAAGATATAAATACTTGGGGAAAGCAAAGTATAATACCTT
GGAGGAAGAAAAAAATGGAAAAACCATTTGACGAATCTTATCAAGGATTT
GATGACTCTGGAAAGTATTACACCAGTTTCTGTCACAGTTTGTTTTCTGA
TCATAAAATTTCAGCTTACAGCTACAACGAGGAAACACATAAATTGGAAG
CCAGTTTGATCAAGTTTAAAGCAAGTTGCCGAGTTTGCTATGATCCTAAA
ACAACCCGTTGGTTCGATTATAGAATTACTCAACCAAAGTTATGGTTGGA
TAAAGATGACACATTGGAAATACGCAGTGATATGTTTAAAGAATATTTTG
GGACATCAACGAAATTAAAATCTAAAGATGTGAGTAAAGACAAAATTGTT
CAATTATCCATTGGGTATAAATGGGGCTCGGTTTATAATTATCTTGATCG
GTGGATTTTTAAGACTGAGAAACATGGTAAATTCTTCATCATCTTGTTGC
GAGATCAGGACAGCGGGACCCATTATCTGTATTTGTTTAGTTTTGATGAG
AAAGGAATATCTCATTTTAAGACAATAACAATTAAAGATCACGCTTTGTA
TGAGCGATTTAATGGTAGGAATGTTCGGCAAAATGTGTTCTTAAATTTTG
ATGCTGGGCATTTCTACATTATCGGTCAAGAAAAGAGATTCAATAAACCA
GTGAACGGAGAATCCAAGTGCTATGAAGACTATACAAATTCTGGTTGGAT
GAGCGGTTTCAATTTTGAAGGAAATAAAATATTTATGTTTCCGATTATAA
AACAGGAAAAAGAACACCCTCATTATTTTCAATATATAGCACAATGCAAC
GGTTCACAATTTCTTGTGGTTTGGCTTCACACACTTGAAGTCGAGATCTT
TGATGCCACTGTCGATGGGATGATCAGGTTGAAGAAATTCCCACTCTCGA
TGAAGGAATCCGATCATATTCCGTATAATCCATTTCAAATATTACTGGGG
AAAAAACAGCTACTTTTATCTTTGAAATACTGGCTTATGGACAACGGTAA
TGTAGTTGCTTTTTATGACTTGGACTCTGCAAAGCTAGTATTTACCTATG
AACATCCTCATTACAAAATGATTGAATACCATGATCTGAATTTTGAAACT
AAAGAGTTGTTTGTGACCAGATATGGAGGATGGTCCAAAACAATGCTGGA
AGTCAGTAAAGTTGAGGGTAACTTTTTTTCTTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.18950MSTRG.18950Clytia hemisphaerica_ch_hm2_pilongene
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.18950.2.p1MSTRG.18950.2.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.18950.2.p1.exon2MSTRG.18950.2.p1.exon2Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.18950.2.p1.exon1MSTRG.18950.2.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000210_pilongenomesc0000210_pilon:422691..424532 -