MSTRG.18614.1.p1 (mRNA) -

Overview
NameMSTRG.18614.1.p1
Unique NameMSTRG.18614.1.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000202_pilon:305980..307245-

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.18614.1.p1 ID=MSTRG.18614.1.p1|Name=MSTRG.18614.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1266bp|location=Sequence derived from alignment at sc0000202_pilon:305980..307245- (Clytia hemisphaerica_ch_hm2_pilon)
TTCATTGCATAAAATCTCCGCCCGATCTAATACTGGTATACGCCCTTTCA
GGCCTTGAGTCTGAAAGTCATCTCTCAAGACCTCTTTTAGCAATTTCACG
CAAACAAGATGGAGTCGGAGTAAGTATTTTAAATTTTGTGGTTTTTAAAT
CCTACTTTATCTCTTCTTACATTCAGTGTAAGGTAAGAGATTATATTTAG
AAACTGACTGCTATTTATACAAGAAGTAAATTGCGGTCGATTTAAGCATA
ATGTTTAAACGTTTATGTCTTAGATCAACAAAAAGGAGCTCTGAGACCGA
TGCTAATGAATCCGGTGATGAGACTCGACAAGCACCACCCAAACGTAGAC
GATTTGAGCTTAATAACGAGAATGAAGCTGCTTCATGGGAGTTGACTGAA
CCTATGAAGTTGTACATAGAGAAATACATTGCCACTCATGTCCAAGAAAA
AGACTTGAAAGAGCAGGTCTATAGTGAACATCCTGTCCCAGCTAACCTGA
AAAAGGTGCCAGAATTGGACTCTTATATGAAGACATTATTGCAAGATAAT
TCAAGATATCAAACATTGAAGTTTGAGAAGACTTTAAAACATTTGAATGA
TAAGATACAAGCTGTTTATGGCCCAGTCTCAAAAATCTGGGCAGCTTTCG
AGGAAGAGAAAGAGAACTGTAGTGAAGAGGAATTAGAAGAAGGCCGGGAA
ATAGCACAATGCTTCGAACAGGCTATTATGCTGCTTGGCCAAGTGTCGAA
CTCAGTGATGTATTACCGCAGAGAAAACGTCTTGAGTACACTCATTGAAT
CCTCAGCACAAATTAAAGAAATATTACGGAATCAATCGAAAGACATGAAT
GATCAATCCAATTCCAGTCTATTTGGTGAAACCTTCGAAACGAAACTAAT
CAAGGATTCCAAAGCTCTGAAAAAGTCAGAGGCATTCTTCACCGCCCTGA
AAAAGCCGGCAAAGACACAATCCTCATCTGCTACCGCTGCCAGTTCCAAC
CAGCCCAATCGCAGGGGCTCCTTGCTTAGAGGAGGAAGAAGCAGGGGCAG
TTCTCATTTAGAGGTAAGACCTCATTCCTTTCAAAAATTAGTTTGTCCAA
AACCAGAAAACCCTCAACTGATAATAACCTGTCCTCTAGACTTGGGAAAT
CAACATCTTTTGTCCCATGTTCATCCCTCAGTAAAAGGTTTATTTCCCCA
GCAGTTAATTCCAAACTTACTTCCTGCCGGGAAATTGAAATTTTTCAGCC
AGAACTGGGAAGTCCT

Coding sequence (CDS) from alignment at sc0000202_pilon:305980..307245-

>MSTRG.18614.1.p1 ID=MSTRG.18614.1.p1|Name=MSTRG.18614.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2004bp|location=Sequence derived from alignment at sc0000202_pilon:305980..307245- (Clytia hemisphaerica_ch_hm2_pilon)
ATCAACAAAAAGGAGCTCTGAGACCGATGCTAATGAATCCGGTGATGAGA
CTCGACAAGCACCACCCAAACGTAGACGATTTGAGCTTAATAACGAGAAT
GAAGCTGCTTCATGGGAGTTGACTGAACCTATGAAGTTGTACATAGAGAA
ATACATTGCCACTCATGTCCAAGAAAAAGACTTGAAAGAGCAGGTCTATA
GTGAACATCCTGTCCCAGCTAACCTGAAAAAGGTGCCAGAATTGGACTCT
TATATGAAGACATTATTGCAAGATAATTCAAGATATCAAACATTGAAGTT
TGAGAAGACTTTAAAACATTTGAATGATAAGATACAAGCTGTTTATGGCC
CAGTCTCAAAAATCTGGGCAGCTTTCGAGGAAGAGAAAGAGAACTGTAGT
GAAGAGGAATTAGAAGAAGGCCGGGAAATAGCACAATGCTTCGAACAGGC
TATTATGCTGCTTGGCCAAGTGTCGAACTCAGTGATGTATTACCGCAGAG
AAAACGTCTTGAGTACACTCATTGAATCCTCAGCACAAATTAAAGAAATA
TTACGGAATCAATCGAAAGACATGAATGATCAATCCAATTCCAGTCTATT
TGGTGAAACCTTCGAAACGAAACTAATCAAGGATTCCAAAGCTCTGAAAA
AGTCAGAGGCATTCTTCACCGCCCTGAAAAAGCCGGCAAAGACACAATCC
TCATCTGCTACCGCTGCCAGTTCCAACCAGCCCAATCGCAGGGGCTCCTT
GCTTAGAGGAGGAAGAAGCAGGGGCAGTTCTCATTTAGAGGTAAGACCTC
ATTCCTTTCAAAAATTAGTTTGTCCAAAACCAGAAAACCCTCAACTGATA
ATAACCTGTCCTCTAGACTTGGGAAATCAACATCTTTTGTCCCATGTTCA
TCCCTCAGTAAAAGGTTTATTTCCCCAGCAGTTAATTCCAAACTTACTTC
CTGCCGGGAAATTGAAATTTTTCAGCCAGAACTGGGAAGTCATGGAGTCG
GAATCAACAAAAAGGAGCTCTGAGACCGATGCTAATGAATCCGGTGATGA
GACTCGACAAGCACCACCCAAACGTAGACGATTTGAGCTTAATAACGAGA
ATGAAGCTGCTTCATGGGAGTTGACTGAACCTATGAAGTTGTACATAGAG
AAATACATTGCCACTCATGTCCAAGAAAAAGACTTGAAAGAGCAGGTCTA
TAGTGAACATCCTGTCCCAGCTAACCTGAAAAAGGTGCCAGAATTGGACT
CTTATATGAAGACATTATTGCAAGATAATTCAAGATATCAAACATTGAAG
TTTGAGAAGACTTTAAAACATTTGAATGATAAGATACAAGCTGTTTATGG
CCCAGTCTCAAAAATCTGGGCAGCTTTCGAGGAAGAGAAAGAGAACTGTA
GTGAAGAGGAATTAGAAGAAGGCCGGGAAATAGCACAATGCTTCGAACAG
GCTATTATGCTGCTTGGCCAAGTGTCGAACTCAGTGATGTATTACCGCAG
AGAAAACGTCTTGAGTACACTCATTGAATCCTCAGCACAAATTAAAGAAA
TATTACGGAATCAATCGAAAGACATGAATGATCAATCCAATTCCAGTCTA
TTTGGTGAAACCTTCGAAACGAAACTAATCAAGGATTCCAAAGCTCTGAA
AAAGTCAGAGGCATTCTTCACCGCCCTGAAAAAGCCGGCAAAGACACAAT
CCTCATCTGCTACCGCTGCCAGTTCCAACCAGCCCAATCGCAGGGGCTCC
TTGCTTAGAGGAGGAAGAAGCAGGGGCAGTTCTCATTTAGAGGTAAGACC
TCATTCCTTTCAAAAATTAGTTTGTCCAAAACCAGAAAACCCTCAACTGA
TAATAACCTGTCCTCTAGACTTGGGAAATCAACATCTTTTGTCCCATGTT
CATCCCTCAGTAAAAGGTTTATTTCCCCAGCAGTTAATTCCAAACTTACT
TCCTGCCGGGAAATTGAAATTTTTCAGCCAGAACTGGGAAGTCATGGAGT
CGGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.18614MSTRG.18614Clytia hemisphaerica_ch_hm2_pilongene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.18614.1.p1.exon2MSTRG.18614.1.p1.exon2Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.18614.1.p1.exon1MSTRG.18614.1.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.18614.1.p1MSTRG.18614.1.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000202_pilongenomesc0000202_pilon:305980..307245 -