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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000202_pilon:246271..251701+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.18607.1.p1 ID=MSTRG.18607.1.p1|Name=MSTRG.18607.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5431bp|location=Sequence derived from alignment at sc0000202_pilon:246271..251701+ (Clytia hemisphaerica_ch_hm2_pilon)
AGAATCCACTCAATGTTTGAAACACTTCAAAacgtttcatatcaaaatta
tttttaattttctagaaTTTGTGTCTGAaagtttggagaaaaaaaaacat
gatgtCAAGTTGGATAAAGTCATTTATCATTTCTGCGGTGGCATTTTTGA
TAGTTGAAGGAAAATTACGTTTCGTTGATTTGTCGTTAAAATATGATGAG
AAAAATACACCTTACTATGGTATCTATAAAAGCCATTTCAAGTTTCTTCA
ACAGGTAAAGGTCCATTTATCTAGAATGTGATTGCCCTTCTCTTATCTGA
GCCGCTCTTGTTGCCTGTGGGAGAGGGGCAACCATTTTAGTGTCAACTAT
TTACATTCGACTGTCTTTAACTCGAAATTCTGTTATTccaatctttctgt
aatttgtACTAAAATATGTGGTCCCCTTAGCTAAAGACTATagtaaatta
ctctctgtaattcgaatctttctcttattcgaataaaatttttggtTCCT
TTAAGATCAAATTAAAAAGAGTGACTTATATATCCAATATGATAACTTTT
ATTTATCAATCTGACAGGTTTCAGAACCATATCCAAAGTTTCAACTTGGT
TACAATGTTTTTAGTACGAATGAGCACGTGGGAACACACATTGATGCTCC
ATTACACTTCGTTAAAGATGGACAGACTGTTGATCAGATACCTCTAGAAA
AATTAGTAAGTATACTTAATTACACATCTAAAAGAAATTTGCATTTTTGT
TCAACTATACTCACTTCCCCTTCTCATAGAATCAGTAGGATTTTCCCAGC
TGATAATGGGAAAACTAACGGACTGAAACCCGGGATTGATAAATGCTTTT
TATGgctgggatttgaattccattgttttcaagtcacgAAATCTAGTTGG
AATCGAAAATAGCATAAtactttgcagtgaggatttgtatatttaattat
tttcagtggggacaaaaattggtgtacagtttacaacttttttttttttt
ttttttttttttttttttttttttttttctttattgaaacaaaaacacgt
gtacactacgaacatattacaaaacattacttaaacataaaatatagtcc
ctccccccgctaggaactaacgttatatcgccagaggtactagactatgt
aaaaataaataaataagtaaataaagaaaaaatcttggagaaggaagcta
caattgttaggtaaaagcctaaaataaagcaccgctaaaccttccagctt
cgttaagaaattcaacaacagaacaaagaatagatttatttagatttgaa
ttcaaactttcatccccatataataaaagccgacagaaaaaaggagggtt
aagcggcggatgaaaaataatgcctagggtctgaagtttgtcgaacaaag
aatgtcttgcatgggaatatatagagcagtgcagaagaaagtgctgagtg
ttttcaacagagttagttcggcaaccacagaaagggtctaaagtgtcgcg
gaagccatgtctaaatttatgctcgttgagatggctgaaaccgacccgaa
gtcgattaagaaagatcactccttgaatgtcaggaacatcaaaaacatga
gattgcttgggtctcaaaaattcatagattgcttttttgaaagttttaat
tgaaggtagatctcgtatattacctcccagaacattccactgagatatgc
agtacggaaaaaaagtgttacggaaacgctcagttcgtatatttagagga
taaataggatttcttgttctaaggccacctggtgctgtaagtcttactgg
caggtagttacgtaaatacgaaggggctaaattgttaataattccataga
agaatgtcatttcttctagcaaagcgcctgtcagcaagactttcaagacc
aagttctgaatatagtttttcttgagacgttccacgaaaacagcctgtta
tagctaaacaggcattatattgaatagattcaagcttctgcacaaaggta
gcatttcccgggcggtcatatacgatatcaccataatcaagatgaggcct
aatgaaagatttataaatggttagtagagatctcctaggcacatgcttgc
gaagccggttaataagaccaattcctttattggccttttttatcttctcg
tctagatggcgatcaaaagaaagttttgaatctaagattagaccaagatg
tttctggtactcactggtcgcgatattagaattattaaaggagattactg
gagcattaggaggagtgagtctacaggtaaaatagacttcaatggcttgc
ttagatgggtcagggttaaaagacatcttccattgatgagcccagtcagt
tatcctggagagatctctgttaagtacttcaaggctcaagagttgatcaa
tcacaagagagaataaagaggtatcgtcagcaaaaatcttcggttttgac
tcaaggttttttggaagatcattaatataaattaagaagaacacAATGGA
CCAAGgatcgagccttgaggtaccccagcattgattcgctttccactcag
atgtttttccatttaacacaactctctgatgcctatcgttaagaaagctg
cgaattaaggaaaacaacggtccagtcaccccataagatttgagtttttt
tttttaagagtaagccatcgtgccacaacccgatcgaatgcctttgaaat
atctaaaacaccccccctggtatctagagaaggatctttgtcaaaccctg
tataaatatcatgcgttatggataacaactgagaaatgcaggaatccccc
tcccgaaaaaccagactgacaaggagaaaataagttattgttttcaaaat
acctgtaaagtgtatcgtaaatacacttttcatatatttttccaaacaca
ggaagaagagacactggtctgtagtttttggctatgctcctgtctccctt
tttatagacaggaaccacgttacctttcttccactgtgatgggaagatgc
cagagttgatgatagaaagattgaatatgctaagcaaaggttttactaga
gacttaccacagattctgaccatacgagtagaaatattatcccacccatg
ggccttgttaacattcaaagaattaataatagactcgattttttcttctt
caaatacaagaTTATCCCAGTCtagagttagtaagaaattgttcaggtgg
caaaacactgccagtatcgataagtgagcattggtttgagaaaaaagagt
taaaaatatcggccttctcagaaacatcacttacaaggacgtttctttca
tttcgaataggtggaattttcggggttttacgtatgttcagaaactgctt
cagcgtagaccagtatttcttacttcctatgtttggatcatttaaagagt
tgccaagacgagaaaaataactatccTTGGCAGTCTTGATGGCCAATCTG
CACCTGTCAACCATGTTATCAAGTGTCTGACCATCTAAAGGATTTCCCCA
TTTTCTCCAACGACGATTTACAACTGGGGACAACTGCTCATTCAGGAGAT
TTGAGTTGCAGTGCAGATGTATTCGCTGAGTACTGTAAACTGGCTGTGAA
TATAGAGACAGGGTAAGGCTGTATATGGACTGAAGGGAGATTAATTATCT
TGATATGCTATTATTCAGGTTGGTCCGCCGTATATAATTGACGTAGAGGC
TGAGGTTGAAAAGAATCGAAGTATGTACATTACAACCCAACATATAATGG
ATGCTGAGCAGAAGCAGGGCAAAATTGAAAGTGGATCTATCTTATTGATA
CACACAGGTTTGGATACAATTGTTATAACTTTTCTCGTGGGTACTGGTAA
AGTCGAAAATTCTACAGATATATCACCACGTTACTAACCGGCAAGTTGTC
TAGCTTGACCCCCCTGCATCAATAGTTGTTTTTTagcctttttcacaaaa
ttttatctTCTAAGAGGTTCTACCCCAGATTTCCAGGGCAGGGCAGTATA
ATTTGTTCATCAAAATTTCCAGGGAGAGTTGGTGTCGGTACTCCTGTttg
aatgttgtttttttttggaataaccCATTAAACGAAGTCCAAAACTACAT
ATTCTTAATGAGGTGGAGATCGCCTACaataaaggtcataatattttgat
aattttggttattttaacgttcttcaagatttaaagttccggcgagaaag
tcgattttgggctatctctttaatttaatcgaatatttcaattcggaagg
ggttggcagacttacaggctatattctgagccttattggactatttttga
acttttggatcctcagatcttaAGTTTCATATTAAaattcagagttaaaa
ctctacccttccaacctactttagagcatttacaaatcgcttgtggttca
aaaacttcccggtgtatttccctcttttctcaaatattatgaccttgatt
gtagcaAGAATTCAAATTTGTTCGGCGTAATGGTTTGCTAAAATTTACTG
TATTCTTGCTAGTCTAGCAGGACAGGCTATGCGTGATTAGGgctattaaa
ggttttgttttgaataagaCTGATATCGTTTGCTGGCTCATTAATTTTAT
agtacaagcttttttatattgaattgacacggatgtggatcaggattggt
cagaaagagaaaaagaaaaacatttttcgcttatatcagcataatataac
aataggcagtcactgtcctgatatgaaatatgtgtgtGATATCAGACGGA
AACActtattctaaaaataaaaccttagaTAAAACTTAAAAGTTTACTAT
TTGTGTcctaattttcaggttttagcAAGAGAGTTTCAAATTTTACTGAC
TATTATGGTGGCAACCATTCCGACCCATCAACTTATGATTTTCCTGGCAT
GACTGGGGAGGCTGCTCAATGGATCGTTGACAATCGAGAGGTATAACAGA
GAACTTAGATATTCGTAATCTTTGAACCCTAACCCAAGTGTTAACACAAA
TGCAAGGTCTTGACAGATCTCACTACAACCTCGCAAAAACATTGCGCAAT
GAGTATCATAGATTAACAAACTTTCTCTCATATTTATAGATTGCCTCCTT
TGGCGTCGACACGCCATCTTTCGATCACGCCAAGGGCGCCGATGACTGGT
ATCCAGTGCATCGAGTTTTTCTGAACAAAAACATCTCTGGATTCGAAAAT
ATGGATTTGTCCAAAATCAATGAATTTCGTGATAAGAAGGGCGTCTTGAT
TATCGCTCTTCCGATGAAAATTGCGGGCGGAACGGGTGGACCCACCCGTA
TTGTTGCTATGTATGATGACTCGGTGACAGTATCAGCCTCGTTTTCGTAC
TGCTATGTTGCTATGGTATCAATCATAGTCCCAGTCCTGGTTGCATTGGT
TAATATGCTGTATTAAATGAAAGATTCAAAT Coding sequence (CDS) from alignment at sc0000202_pilon:246271..251701+ >MSTRG.18607.1.p1 ID=MSTRG.18607.1.p1|Name=MSTRG.18607.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=4410bp|location=Sequence derived from alignment at sc0000202_pilon:246271..251701+ (Clytia hemisphaerica_ch_hm2_pilon)
atgatgtCAAGTTGGATAAAGTCATTTATCATTTCTGCGGTGGCATTTTT
GATAGTTGAAGGAAAATTACGTTTCGTTGATTTGTCGTTAAAATATGATG
AGAAAAATACACCTTACTATGGTATCTATAAAAGCCATTTCAAGTTTCTT
CAACAGGTTTCAGAACCATATCCAAAGTTTCAACTTGGTTACAATGTTTT
TAGTACGAATGAGCACGTGGGAACACACATTGATGCTCCATTACACTTCG
TTAAAGATGGACAGACTGTTGATCAGATACCTCTAGAAAAATTAGTTGGT
CCGCCGTATATAATTGACGTAGAGGCTGAGGTTGAAAAGAATCGAAGTAT
GTACATTACAACCCAACATATAATGGATGCTGAGCAGAAGCAGGGCAAAA
TTGAAAGTGGATCTATCTTATTGATACACACAGgttttagcAAGAGAGTT
TCAAATTTTACTGACTATTATGGTGGCAACCATTCCGACCCATCAACTTA
TGATTTTCCTGGCATGACTGGGGAGGCTGCTCAATGGATCGTTGACAATC
GAGAGATTGCCTCCTTTGGCGTCGACACGCCATCTTTCGATCACGCCAAG
GGCGCCGATGACTGGTATCCAGTGCATCGAGTTTTTCTGAACAAAAACAT
CTCTGGATTCGAAAATATGGATTTGTCCAAAATCAATGAATTTCGTGATA
AGAAGGGCGTCTTGATTATCGCTCTTCCGATGAAAATTGCGGGCGGAACG
GGTGGACCCACCCGTATTGTTGCTATGTATGATGACTCGGTGACAGTATC
AGCCTCGTTTTCGTACTGCTATGTTGCTATGGTATCAATCATAGTCCCAG
TCCTGGTTGCATTGGTTAATATGCTGTATTAAatgatgtCAAGTTGGATA
AAGTCATTTATCATTTCTGCGGTGGCATTTTTGATAGTTGAAGGAAAATT
ACGTTTCGTTGATTTGTCGTTAAAATATGATGAGAAAAATACACCTTACT
ATGGTATCTATAAAAGCCATTTCAAGTTTCTTCAACAGGTTTCAGAACCA
TATCCAAAGTTTCAACTTGGTTACAATGTTTTTAGTACGAATGAGCACGT
GGGAACACACATTGATGCTCCATTACACTTCGTTAAAGATGGACAGACTG
TTGATCAGATACCTCTAGAAAAATTAGTTGGTCCGCCGTATATAATTGAC
GTAGAGGCTGAGGTTGAAAAGAATCGAAGTATGTACATTACAACCCAACA
TATAATGGATGCTGAGCAGAAGCAGGGCAAAATTGAAAGTGGATCTATCT
TATTGATACACACAGgttttagcAAGAGAGTTTCAAATTTTACTGACTAT
TATGGTGGCAACCATTCCGACCCATCAACTTATGATTTTCCTGGCATGAC
TGGGGAGGCTGCTCAATGGATCGTTGACAATCGAGAGATTGCCTCCTTTG
GCGTCGACACGCCATCTTTCGATCACGCCAAGGGCGCCGATGACTGGTAT
CCAGTGCATCGAGTTTTTCTGAACAAAAACATCTCTGGATTCGAAAATAT
GGATTTGTCCAAAATCAATGAATTTCGTGATAAGAAGGGCGTCTTGATTA
TCGCTCTTCCGATGAAAATTGCGGGCGGAACGGGTGGACCCACCCGTATT
GTTGCTATGTATGATGACTCGGTGACAGTATCAGCCTCGTTTTCGTACTG
CTATGTTGCTATGGTATCAATCATAGTCCCAGTCCTGGTTGCATTGGTTA
ATATGCTGTATTAAatgatgtCAAGTTGGATAAAGTCATTTATCATTTCT
GCGGTGGCATTTTTGATAGTTGAAGGAAAATTACGTTTCGTTGATTTGTC
GTTAAAATATGATGAGAAAAATACACCTTACTATGGTATCTATAAAAGCC
ATTTCAAGTTTCTTCAACAGGTTTCAGAACCATATCCAAAGTTTCAACTT
GGTTACAATGTTTTTAGTACGAATGAGCACGTGGGAACACACATTGATGC
TCCATTACACTTCGTTAAAGATGGACAGACTGTTGATCAGATACCTCTAG
AAAAATTAGTTGGTCCGCCGTATATAATTGACGTAGAGGCTGAGGTTGAA
AAGAATCGAAGTATGTACATTACAACCCAACATATAATGGATGCTGAGCA
GAAGCAGGGCAAAATTGAAAGTGGATCTATCTTATTGATACACACAGgtt
ttagcAAGAGAGTTTCAAATTTTACTGACTATTATGGTGGCAACCATTCC
GACCCATCAACTTATGATTTTCCTGGCATGACTGGGGAGGCTGCTCAATG
GATCGTTGACAATCGAGAGATTGCCTCCTTTGGCGTCGACACGCCATCTT
TCGATCACGCCAAGGGCGCCGATGACTGGTATCCAGTGCATCGAGTTTTT
CTGAACAAAAACATCTCTGGATTCGAAAATATGGATTTGTCCAAAATCAA
TGAATTTCGTGATAAGAAGGGCGTCTTGATTATCGCTCTTCCGATGAAAA
TTGCGGGCGGAACGGGTGGACCCACCCGTATTGTTGCTATGTATGATGAC
TCGGTGACAGTATCAGCCTCGTTTTCGTACTGCTATGTTGCTATGGTATC
AATCATAGTCCCAGTCCTGGTTGCATTGGTTAATATGCTGTATTAAatga
tgtCAAGTTGGATAAAGTCATTTATCATTTCTGCGGTGGCATTTTTGATA
GTTGAAGGAAAATTACGTTTCGTTGATTTGTCGTTAAAATATGATGAGAA
AAATACACCTTACTATGGTATCTATAAAAGCCATTTCAAGTTTCTTCAAC
AGGTTTCAGAACCATATCCAAAGTTTCAACTTGGTTACAATGTTTTTAGT
ACGAATGAGCACGTGGGAACACACATTGATGCTCCATTACACTTCGTTAA
AGATGGACAGACTGTTGATCAGATACCTCTAGAAAAATTAGTTGGTCCGC
CGTATATAATTGACGTAGAGGCTGAGGTTGAAAAGAATCGAAGTATGTAC
ATTACAACCCAACATATAATGGATGCTGAGCAGAAGCAGGGCAAAATTGA
AAGTGGATCTATCTTATTGATACACACAGgttttagcAAGAGAGTTTCAA
ATTTTACTGACTATTATGGTGGCAACCATTCCGACCCATCAACTTATGAT
TTTCCTGGCATGACTGGGGAGGCTGCTCAATGGATCGTTGACAATCGAGA
GATTGCCTCCTTTGGCGTCGACACGCCATCTTTCGATCACGCCAAGGGCG
CCGATGACTGGTATCCAGTGCATCGAGTTTTTCTGAACAAAAACATCTCT
GGATTCGAAAATATGGATTTGTCCAAAATCAATGAATTTCGTGATAAGAA
GGGCGTCTTGATTATCGCTCTTCCGATGAAAATTGCGGGCGGAACGGGTG
GACCCACCCGTATTGTTGCTATGTATGATGACTCGGTGACAGTATCAGCC
TCGTTTTCGTACTGCTATGTTGCTATGGTATCAATCATAGTCCCAGTCCT
GGTTGCATTGGTTAATATGCTGTATTAAatgatgtCAAGTTGGATAAAGT
CATTTATCATTTCTGCGGTGGCATTTTTGATAGTTGAAGGAAAATTACGT
TTCGTTGATTTGTCGTTAAAATATGATGAGAAAAATACACCTTACTATGG
TATCTATAAAAGCCATTTCAAGTTTCTTCAACAGGTTTCAGAACCATATC
CAAAGTTTCAACTTGGTTACAATGTTTTTAGTACGAATGAGCACGTGGGA
ACACACATTGATGCTCCATTACACTTCGTTAAAGATGGACAGACTGTTGA
TCAGATACCTCTAGAAAAATTAGTTGGTCCGCCGTATATAATTGACGTAG
AGGCTGAGGTTGAAAAGAATCGAAGTATGTACATTACAACCCAACATATA
ATGGATGCTGAGCAGAAGCAGGGCAAAATTGAAAGTGGATCTATCTTATT
GATACACACAGgttttagcAAGAGAGTTTCAAATTTTACTGACTATTATG
GTGGCAACCATTCCGACCCATCAACTTATGATTTTCCTGGCATGACTGGG
GAGGCTGCTCAATGGATCGTTGACAATCGAGAGATTGCCTCCTTTGGCGT
CGACACGCCATCTTTCGATCACGCCAAGGGCGCCGATGACTGGTATCCAG
TGCATCGAGTTTTTCTGAACAAAAACATCTCTGGATTCGAAAATATGGAT
TTGTCCAAAATCAATGAATTTCGTGATAAGAAGGGCGTCTTGATTATCGC
TCTTCCGATGAAAATTGCGGGCGGAACGGGTGGACCCACCCGTATTGTTG
CTATGTATGATGACTCGGTGACAGTATCAGCCTCGTTTTCGTACTGCTAT
GTTGCTATGGTATCAATCATAGTCCCAGTCCTGGTTGCATTGGTTAATAT
GCTGTATTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000202_pilon | genome | sc0000202_pilon:246271..251701 + |
|
