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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000001_pilon:3486093..3495133+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.186.2.p2 ID=MSTRG.186.2.p2|Name=MSTRG.186.2.p2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=9041bp|location=Sequence derived from alignment at sc0000001_pilon:3486093..3495133+ (Clytia hemisphaerica_ch_hm2_pilon)
TTTTAGaactaaaaaaacaacatcGATCACAATAACAACAAATGAAGACA
AAAGAACGTTGATCGTTCGACACGTTCAAAACACATTCAAAACATGTCCA
CGTTGAGCACGAAATGTATCTTCTTGAAAAAACCTTTAGAAACGATGATG
ATGGCGCAGACACACCGTTCATTGTTTGTGGACGCTACTCTCAAATGTCC
TGTCATGTCCAGCATGCTGGCGAAGAAAAATGATCACTCaaatttgaaag
gtattttgcttattttctaaACATGATTAGAACCACCGACTTTCTGTCTT
CTCTCCGCTCCATCTTATTGGCTCTTTCTGGCTCTTTTAACACCGGTCCT
AAGTTAACGCCAGCCTCTCATACTGCCACTGTCCAATTTGCAGCTTAGGC
CGCTAAAAGGGGCCTTCAAAGTAAATGTTGATATGAATTGGCATGAATAG
GGTCGAAACTGAGCTACTTATGTAGGGCTTAAATCTACCCTTACAATATT
GGAACCGGATTTGTCTTTTAATGTGTATGTCAGATGGAAATGGTTATTTG
GTGTGTGGCATTGGGTCGATGGATGTGTACTAAGTGGCAGTTTTTACACT
AGGCTTGGATAGTGGTAGTATTCGAGCATTTGCTTTGAACTATTTCCATC
GATGATCTTTACTATTGATTTTGTCATATATgttttttctttggattgat
ttgctagttttgggttcagttattaaactttttcttttgtaaaggtagtt
tttggccttcATTAACAACTCTGTACTGCTTTCTTCACATTAAAAATGTC
GTTCTTCGGTTCGTAAACTGTTGAACGGTTTAAATTGAAAATCGATGTTT
TCGTTTAATTTTCTCCTGCGCCTCTCCTCTTGATTGGAGTAAAATAGCAA
GGTGTGTTTGATTATGTTTCTTTCCTTAAATGTCGATAGAAAGCCGATGA
ATTTCATGCCATTGCTGAGGTTGTTAAATAGATTTAATTGATTAAAAGTT
AATCTTTTTAATACCGATGTGATAATGAAATTCTGTACACGCTTGTTACT
CAGCACTTTTTTAATTCTGCGCTGAGGTAATTACTGGAATTTAACTACGG
ATTATTGTTTAATGCATTCAActataaatttgaatataaatAAAACCATA
TATAAAACACCTGAAAACACTCCTATAACAATCATATAACTCTAACTCCG
GAGGCTTTCCCTACTTTTGACAACGCATTTCGTGCCAAACTTTGACATGA
TGCAATGACAAACTATATTTCATTTAGTATATCTTTTTATCAACATCATC
CCATTATCTCTCATATATTCTCTCACTCGCAACTCTCCGTCTTTCACGTT
TTGATAAGAATGTGTGGAATGTCTTTCGATCTTCAACGCTGAACACCACA
TGGTGATAGAAATGTATTGAAAATATCACGTGGTTCTTTATTCAGACATT
TCTCATCAGATTTAGATATCTGGCCCAAAGTATTACAAATGCAAGGGTTT
CAAATTAAACTACGCacgagaaaaaaatatcaagcatgtttttatttatc
caaaaaatgtttttctatttttaaattcaataaaagtaataagattatAC
ACTTGCCTCATACATGTTTTTGGCTGATATAGTGACCCTTACAGTATgcc
aaaaatggaaaaaaatgagctaaaattgcttgtcGCACGGCCACTTACTG
TtttgtttacttgattttttttcgtgcaaatttcaTGAGATCAAAGTAAA
AGCTACACAAATAtctaattcgaaacccgtgtattattGGAAAGTACTAA
TTATTTCGTTTCTCGTTACAAAACGTCCCTAAATTCAATCCTTTATTTGC
AGGTCAATGTCCATTCAGCCAAGATTCAGTCCTTCAAACGTTAACAAAGG
GCGTCAATCGATTCTTCCACACTTCACAACACGATAATGCATCTAAAAAC
AACCCTCCGCCCATAAACACTAAAGATACACCGCCCTCAGAAGAAGGGCG
TATTTTCAATGAAGAAATTGGAAAGCCTGCAACAGGACAAGGGAATCATC
TCAATATTTTAGAAggtttttatcttattttcttTATATTAGTAGGGGGC
TAAGACTGGGGtgccgtgacatcttttttttaCCTAACCGTTTTACCGTT
TTCAATCTgtaagggaaaataaggggtagaaaaatagcttattttcaaaa
gtcaaaacatacgaaaatgattggtaccatctgatagtGACAGAgcatga
aattaaaaaaaaattgtattacaacaactcccTGACTTAAACagacaaag
aaatacagccgctttaagaccaactaactgtttACTGTGATTTGTCACGG
GACCCCAGGCTTGGTCCCTACTATATGACTTGCGCATTCAAAATGCCAAG
ACTAGTAAGTATAGTATAGACAGCCCCCTTTTTGACTGCCTATTCTAATT
TtgggcagaaagttggctgCCTAAAGTCAATACATTGCCTTCATCGATGT
CAATGCAATGATTTCTTTCAATATCTTTcgagcaaagattttaactctCA
ACTTTCTGCACACTTTTTGCTCAGAAAGtcgaccgtctaaactagagcta
ttCCCTTATGCTCCAAAggtttgaagtaataaaaagtTAATATAGCTTAA
ACCACATCTCGATAAACGAACATCTTAATAgtaatataaattttttgatg
attccCCACCTAAGATATTTATAAggatccaatttttttttggcattgCA
GTTCATTCTTTCTCAGATATTCACCATGTGCCGCACAAAACCGCACAAAC
GCCCAAACGCCTCCACATCAAATAACAACGGAACTGAATAAGCAACATTT
TAAATACGAGCAACATTTCAATCGAATGATCGAAGCGAAGAAAACCGATC
ATTCTTACCGCATTTTCCGTAAAGTCAACCGGAATACGGAATCCTTCCCG
ATGGCGGACGACTACACCTTCTCCGACCGCCCACACAAAGTGACTGTGTG
GTGTAGTAACGATTATTTGGGTATGAGTGGTCACCCGGCGGTTGTAAGCG
CCGCCAAGTAAGTAGAGTTCTTTGTTTGATTACTTGTCATATTTTTCGTA
ACACGGGGTCCACTAAAAGCTTTTTCATAGGCTGGATTACGCGATTAAGT
GGTCCAGTAGTACATGGCAGTTCTCAATTTTGAGCTTCACTTAGGCGTAC
TGTAAAACAGTCTTTCAAAATGGTGATCTTCTCAAGTGCTCccagtctac
ttcactggactcgtTGGAATCAATAGAACATTATGAGCAAGTTTTTAGTA
CTGATCTTTATTATACCTTGGGCACAGTTTTCTCGATCTCTGTcaaacaa
aatctaaaatagcGGATATAGTTTGGTCCAGGGTCCAAGGTCGTGAATAA
TCTGGGTTAAGGTAGAAAAtcctttaaaaattgcactattTGGAACCCCG
ATAAAACTTTTTCGACTTTTGCTGACACGCCATCGATGTgtgtttattta
aaaagaaaacgtaatttttaacccttccaGTCCCAGAGACCCACAGAGCG
GGTTCCTCCTGGACACAACTTTCACCTGGCCATATCTCTGGAACTAATAG
ATTTCCGTAAAGTACAAAGTTCTGGGACTGAAAGGTTTgattaaaaacta
atttttgttctacacattttttttcagatcaGTGATCGATGAGAATGGTG
TTGGTGCAGGCGGTACACGAAACATCTCTGGAACAAGCGTCTATCATCCA
ATCCTCGAACAATCATTAGCGCAATGGCATCAGAAAGAGGCTGGCCTCGT
TTTCACGTCATGCTATGTTGCCAACGATACGGCCCTGTTCACACTTGGAC
AACGGTTACCTGGGTGTATTATTTTCTCAGACGCGTCCAATCACGCCTCT
ATGATTCACGGTAAGAAAACGCAgcactttttatataagaacatgaatcT
ACCTCAGGCAAACTTACTGGCTCTTGTAAAAGCGAGTAAAATTTGAAAGT
ACGATTTATATGTTAAAGGGAACGACGTATGGTATATTTATTAAATGCTG
Ttctagcattggcacaaacatccatacggaggagtatttaggagtgctgg
atcataacaaaaaccaaaagtgactttattccaaaaaatatattcaaaaa
agtgaatataatttaccggcaggtacaaaatgcataaaacataatgcata
ttgcataatgcataatagtattgtgtaatttacagaacgattttttattt
tctaaaactctcctagAGGCAAAAACTGCGAAAACCtctttataagagtt
tcttaaaagtaaacattccaattagagggatttccccaaagacgttgttt
acttttcgaatcagaacgaaagagaaaacattcgaatcataacaacaaag
ggttttccgtcagcataaataagAAGAAGATGCAGCTTCTTATTTCTATA
AAAAGgtaaacataaacattcgaatgtgaAATGATTCGaagtcttttttc
ttttctttggtgttttctttGAGCATCCACATTGGTTAATGATTTTtaag
agggaaaacccgttgaactttattagcaattgttcgaaaagatctctgag
aaaacccagaaagatattgctataaaatttacgttttcgagtaagaaaag
taatatacggaggagatattttcgtgttttttctacactatactacgttc
tgtaaaatacaacaatgaaaatcaaaatggcgacaagcattttcactGGA
TCATGGactttcttcatcatccaaaattcaagtttacagctttctaccct
ttattttctggtagaaaatggtatatttgttttgttgaaagtattatctc
tcagattctccttattatagcctctaaaattgacatttttcaaatattat
gcattatgcaatatgcattatgtttatgcattttggacctgccgtaTAAT
TTACTGTAAtgttcAACAATAACACTTTTTGTTTACATTTTGTCTTCATT
CACTTTCGTTTACTGTTGAAAACATAACAAAGTTTTAGCTATACTCTTAA
ACCGCGTATAACTGTCGGTTAAGCCAATCAGCTTTCGGGCTGACATCAGG
catgtatttcagagtataccatggaagTACCACCAAAtccgacccctact
ataagtatagcgctattGCCTTTAAATAGCCTTCGTTTGATAgtttaatt
atctttttaaatatttcactaatAAAATTGATCGTTTGATCAATAACATA
CTGTATACAATATGTgctttgtaccaaaaattacGAGTGTTGTTGAAATT
TTAGTAAAGTTAACCTTGAGATTCTCACTTTTAATAGGTATTCGGACCAG
TGGCGCCGAGAAGAGGATATTCCGGCATAACGACGTCGCTCATTTAGAAG
AGTTATTGAAAAAGGCCGACCCATCAGTGCCGAAGATCGTTGCATTTGAA
ACGGTGTATTCGATGTCTGGAGTGGTGTCCCCCTTAGAAGAACTTTGTGA
TGTGGCTCACAAATATGGTGCACTCACTTTCGTGGATGAGGTATGCAAAT
GAATTTATACCAACATTTCCTTTCTCTGTGAAACTGATAGCTTAAATCTA
AGTGTTTTACACTTATCATGGCATTCAAAAAGGTCACTGACTTCATCAGT
CACTTGAACAATTTCAGGAAATGTAAACTTTTTTCCCATTTGATTTCGCA
CTTGCTGTACTTTACTTGTATTAATTGTTTgtctttcaattttctttgcG
AAATATTGACAAACGGTaattctcgctaattcgaacttaaatTACTCGCA
TGTTACTAATAACTCGAACTAATTCTCCGCTTCTGTCAATGAGAAACTCA
CTCAAAATCCCTCTCTGTCATCAAGACAAAATTTGTGTCCATTTAAAGTT
AGATCTAGTGAAAATGATTTTTATTTCTCCATCATTTTTCTCAGGTGCAT
GCAGTAGGACTGTACGGCAAACACGGCTCAGGAATCGGTGAACTTCACGG
AGTGTTGGACAAGATGGACATCATTTCGGGGACCCTCGGTAAAGCTGTTG
GATGTATCGGCGGTTATCTGGCTGGTTCAGCGTCGCTCATTGATACTCTT
CGCAGGTATACGATCTGTTTTGACTTGTAAAagaattcatcaaaatatgg
atgTGAATTTTTTGGCTAGACATTTTAATTCTGAGGCCGTAAGGCAACGG
AACAACACGAATAACGATGTTTGATCACTCCCGTAGAACTCGCCTACCTC
GAACTCACCGTTTCTCAAACGATAACTTGTTCCCTTAGTTTTTAAGTTTG
GAAGACTCTATGTTCTATCAAAAGATCAAAGGCGTAAATAACAAACAatt
tcaatacttttctttcGTCAGTTACGGTGCAGGATTCATCTTCACCACCG
CCCTACCGCCAGACAAAATTTGCGCCGCTCTCACTTcagttgaaatcttg
aaaagtGAAGAAGGAGAAATATTGAGGCAACGTCATCAAGAGAACGTCAA
GTTGCTTCGAACGAAGTTGTTGAAAGTTGGACTCCCTGTGGAACATTGCA
CCAGTCACATTGTCCCTATACAGGTAACtgtcgaaaaatttttaaaagag
aaaCGCGACTGTGTAAATTTACAGTGAAAAGTTgcaatcttttgaaaata
ttcgaGCTTTCTTGTTGGAcgtcagtactaaaatgtaagacatacatgag
tactaaaaggattttcgctaatttttgacatacccccacctatttttcga
aaatgttattttagtacccatgtactaaaattattttgagcaatttaaca
tagataccacccatttctTGCCCTTTAacggctttaaatttaccaaaatg
gggtcattgttacaaacctagtcgaatttagtgcatcgatctgcaaaata
atataattttattactaaactgtgctgaactgtacattaaaatatttttg
aaaaatatttaaaaagttggaaaaattctgaaagatttctgaagattttt
tcgaaaattcctgaaaaaaaaaatctaattttttccaaaattattaaaaa
aatgctccattttggctgattttagaacaaaatactcagatttttcaaaa
atttctttaagagaccaccctttttggtattttagtacaccaTAGTgggc
aagggggttccaggtcccacctgaaaattcaggtcccaccttatcctaaa
attcccaccttcagcccagactcccagatcccagctaaaaacaaaaaaaa
aatactaattcgaggaacaaaacaaaatttctttaccgtaaTATGAAGAT
GCAatatattacatatgatatattaatatgtctattatatacatttaaaa
agcagatatattaAGGCTCTCAGCTTATGCAAAATAAAAGCAGCTCTATC
Tatctaaaattaattaaataaaattttactttaactttttccaaaacacc
caaagtcccacctaaagaaattaactcccaccttaacttgtttctcccac
ctaaaacctggaaaaccccaaatcccacctgaaaaatttcgacccaaatc
agcaaaagccccccccccactattctggggggggggtgcacactatgtac
acatggtactaaaattaattttgagcttttttgcagtaccaccacgttac
taaatgtcatgatgtctgagattttagtaccgacccccccctgataTATG
TCCGTTTTTGAAGAAGGAGTGCTTTGacaattcaaattcattttggaaaa
aacgGCGCTTTGTTACTTTTTAAGTCGCCCTACGAAtttcttgtttgatt
tttccttCCTTAAGGATGGATGGATAAGTTGAGAGAAGATGTTTACCAGC
CTTTGCAACGGGTCAATATCCTAGCCTATTCTAGTGTTTAACCTCCTTGT
TCGACAACCTATATGGCTATGCATCCACGTAACAAACCCATCCACTTTGA
ATTACGATTTTAGGGACGACTAGAAAGGCTTTTTTCTTGCTAAAGGTTCT
AGATCAATCTTTCAAAGGATGACTATTCAATTTTAAAGGCTTCGTTATAA
TTATTTCcatcaattttctttcaagtgttttgatgCGGAGAAATGTTTGG
AAATTTCGCGACGTCTTCAACAAGAATACGGTATCTACATTCAATCCATC
AACTACCCTACTGTTCCGCGCGGCCGCGAGAAGTTACGCATCGCACCAAC
GCCCTTCCATACCGAAGAAATGATGGATGAACTGGTTTCCGCCCTCAATC
ACGTATGGCGGGATGTGGCGTTACCATATGTACACCCTGTCTGTGAAATG
GACTGTAAATGTCAATTATCATGTCACAATTTTGATGTCCAACACGTCAA
GAATTTCCTATAACCGCCCACCGCCCACCACCCACCACTGCCACCTGCCg
ctgtttttaatattttaattaaTGCAAGTTACTCTGCACGCAAACTTTTA
CTCGTATATACTCCATAGAAGATAGAATTCTCTGCCattcaaatgttttt
taaatttgtataaaCCCTCCTTTGCAAACCCACTTTATACTCGATGCTAA
TCTCTAATCGAATGCATGAACCTTCTCCAGAAGTGGTGGGTACAATGCAG
AATGCGGAACATGTTACCGAAATCTATGAGgtttcatgttttgttaaatt
aCGTAGCTTTCGCCTCTCTTAAGGTGTCGCCTCTACAAATTCAAACGTTT
CCTTCCATAACATCAGAGTAATAGAGTCGATCCCGGTTATTCCCGGTTAT
CAATTTTTGCCGAAGTTAGAGGTAGCTCCAGTTATCCCTTCCCCAAGTGG
TAATTTGAATGtataattgaattatttttttattttataatatttggtgg
tgtttgtatgtatgtctttgaatatttgtgaattatttttttgtgaatgg
ATTATTCGTTTACTCTCTGactatttgatgaaaaatgaagaaaataagaC
GAATCACAATGCACATAGAAATAACGTCTTGTCGTCTTTTGATTTGGTGG
AAAGACCGAAtcataatacaccttttcgaccgtagccggcA Coding sequence (CDS) from alignment at sc0000001_pilon:3486093..3495133+ >MSTRG.186.2.p2 ID=MSTRG.186.2.p2|Name=MSTRG.186.2.p2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1332bp|location=Sequence derived from alignment at sc0000001_pilon:3486093..3495133+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCCACGTTGAGCACGAAATGTATCTTCTTGAAAAAACCTTTAGAAAC
GATGATGATGGCGCAGACACACCGTTCATTGTTTGTGGACGCTACTCTCA
AATGTCCTGTCATGTCCAGCATGCTGGCGAAGAAAAATGATCACTCaaat
ttgaaagGTCAATGTCCATTCAGCCAAGATTCAGTCCTTCAAACGTTAAC
AAAGGGCGTCAATCGATTCTTCCACACTTCACAACACGATAATGCATCTA
AAAACAACCCTCCGCCCATAAACACTAAAGATACACCGCCCTCAGAAGAA
GGGCGTATTTTCAATGAAGAAATTGGAAAGCCTGCAACAGGACAAGGGAA
TCATCTCAATATTTTAGAAgTTCATTCTTTCTCAGATATTCACCATGTGC
CGCACAAAACCGCACAAACGCCCAAACGCCTCCACATCAAATAAATGTCC
ACGTTGAGCACGAAATGTATCTTCTTGAAAAAACCTTTAGAAACGATGAT
GATGGCGCAGACACACCGTTCATTGTTTGTGGACGCTACTCTCAAATGTC
CTGTCATGTCCAGCATGCTGGCGAAGAAAAATGATCACTCaaatttgaaa
gGTCAATGTCCATTCAGCCAAGATTCAGTCCTTCAAACGTTAACAAAGGG
CGTCAATCGATTCTTCCACACTTCACAACACGATAATGCATCTAAAAACA
ACCCTCCGCCCATAAACACTAAAGATACACCGCCCTCAGAAGAAGGGCGT
ATTTTCAATGAAGAAATTGGAAAGCCTGCAACAGGACAAGGGAATCATCT
CAATATTTTAGAAgTTCATTCTTTCTCAGATATTCACCATGTGCCGCACA
AAACCGCACAAACGCCCAAACGCCTCCACATCAAATAAATGTCCACGTTG
AGCACGAAATGTATCTTCTTGAAAAAACCTTTAGAAACGATGATGATGGC
GCAGACACACCGTTCATTGTTTGTGGACGCTACTCTCAAATGTCCTGTCA
TGTCCAGCATGCTGGCGAAGAAAAATGATCACTCaaatttgaaagGTCAA
TGTCCATTCAGCCAAGATTCAGTCCTTCAAACGTTAACAAAGGGCGTCAA
TCGATTCTTCCACACTTCACAACACGATAATGCATCTAAAAACAACCCTC
CGCCCATAAACACTAAAGATACACCGCCCTCAGAAGAAGGGCGTATTTTC
AATGAAGAAATTGGAAAGCCTGCAACAGGACAAGGGAATCATCTCAATAT
TTTAGAAgTTCATTCTTTCTCAGATATTCACCATGTGCCGCACAAAACCG
CACAAACGCCCAAACGCCTCCACATCAAATAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000001_pilon | genome | sc0000001_pilon:3486093..3495133 + |
|
