MSTRG.18596.1.p1 (mRNA) -

Overview
NameMSTRG.18596.1.p1
Unique NameMSTRG.18596.1.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000202_pilon:85147..86355+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.18596.1.p1 ID=MSTRG.18596.1.p1|Name=MSTRG.18596.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1209bp|location=Sequence derived from alignment at sc0000202_pilon:85147..86355+ (Clytia hemisphaerica_ch_hm2_pilon)
AGGTAGCGTaatgatttgatgaaaaataaatttttgatttgaatatttAT AAAGCACGCGTGGTAATAAGGTTAAAATGATGCTGAAAAGcgggtaaaaa taatttttttcattttacatctagagtttttttgcgagattttAGTAGTA GGTATTATAATCATAGAGGTCGTATAATTAAGGATGTAATAGCCATGACA TTCTTTTAATTTGATTAAGGTATCATCTTTGCAAAGGGAATAGGGACATT TTTAgcaaaaacatcgatttttgaaggttaaaatgttcttaagatgttct tattttcactgctttgtgagtatttttcttAGAGTCCGTaggtacttggg caaaaaggggCACAGGGGTGTGATCCCGTcagtcggcaagggtagtaccc cggAACGTGTACCTACTACAAAGTTTGAAAtagaaataagaaattttctt tattgtttTATATAGTGCATTTTTACTGGTATTCTTCGTTCTGCTGACTC AGCACATTACGTCATCAGCCAACATCAACAAATGTATAAAAAGGTGCAAT GACGCTCAAGTAAAATGTACCACTGGTCtctttgaagatgaaaatgagaG AAATTCGAAATGTTGGAATGCTTTCTGTAAATGTAAAGACGAATGTCCTA AAGTGTTTGATCAAATTCCGACACCGACGCCGACGCCGTCAACGACACTA AGAAGACTCCCGCCTATGTTCAAATGGTACGATATTAGAAACAGTAGTCC GTTCAGTTTTTGGGGTAAATCATTGAAACGAAACAATCCTTGTCGAAAGA AATGTAGCGCAAATCAAGATCAATGTCTAGCCTTCTCACAATCATTCGGT GATCGCATGTCTTGTTTTCGAAGGAGAAGATTTTGTTTCAGAAAatgtaa aatcccaaattatatcaaaagttgTGATATCATAAATCTCATAACAGGTC GCCCATTTTGCAAGTATCCCGGCTCTAGGGGCTAATGGGATGCAGAGAAT GACgaattgaaaagttgaaaaggtacaattttgaaaacattgaatatttt tattaagCTTTTGAATGAGGCGCTGGCTGGGATTGACTAAAAATAATGAA TCTTGAAAGAAAATACGATATTCAAAACATCGGAGtccagttttttttca aatagtcttgttacagtggagtctctttaaatcgaacctcgataattcga atgtctcct

Coding sequence (CDS) from alignment at sc0000202_pilon:85147..86355+

>MSTRG.18596.1.p1 ID=MSTRG.18596.1.p1|Name=MSTRG.18596.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1074bp|location=Sequence derived from alignment at sc0000202_pilon:85147..86355+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGATGCTGAAAAGcggTGCATTTTTACTGGTATTCTTCGTTCTGCTGAC
TCAGCACATTACGTCATCAGCCAACATCAACAAATGTATAAAAAGGTGCA
ATGACGCTCAAGTAAAATGTACCACTGGTCtctttgaagatgaaaatgag
aGAAATTCGAAATGTTGGAATGCTTTCTGTAAATGTAAAGACGAATGTCC
TAAAGTGTTTGATCAAATTCCGACACCGACGCCGACGCCGTCAACGACAC
TAAGAAGACTCCCGCCTATGTTCAAATGGTACGATATTAGAAACAGTAGT
CCGTTCAGTTTTTGGGGTAAATCATTGAAACGAAACAATCCTTGTCGAAA
GAAATGTAGCGCAAATCAAGATCAATGTCTAGCCTTCTCACAATCATTCG
GTGATCGCATGTCTTGTTTTCGAAGGAGAAGATTTTGTTTCAGAAAatgt
aaaatcccaaattatatcaaaagttgTGATATCATAAATCTCATAACAGG
TCGCCCATTTTGCAAGTATCCCGGCTCTAGGGGCTAAATGATGCTGAAAA
GcggTGCATTTTTACTGGTATTCTTCGTTCTGCTGACTCAGCACATTACG
TCATCAGCCAACATCAACAAATGTATAAAAAGGTGCAATGACGCTCAAGT
AAAATGTACCACTGGTCtctttgaagatgaaaatgagaGAAATTCGAAAT
GTTGGAATGCTTTCTGTAAATGTAAAGACGAATGTCCTAAAGTGTTTGAT
CAAATTCCGACACCGACGCCGACGCCGTCAACGACACTAAGAAGACTCCC
GCCTATGTTCAAATGGTACGATATTAGAAACAGTAGTCCGTTCAGTTTTT
GGGGTAAATCATTGAAACGAAACAATCCTTGTCGAAAGAAATGTAGCGCA
AATCAAGATCAATGTCTAGCCTTCTCACAATCATTCGGTGATCGCATGTC
TTGTTTTCGAAGGAGAAGATTTTGTTTCAGAAAatgtaaaatcccaaatt
atatcaaaagttgTGATATCATAAATCTCATAACAGGTCGCCCATTTTGC
AAGTATCCCGGCTCTAGGGGCTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.18596MSTRG.18596Clytia hemisphaerica_ch_hm2_pilongene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.18596.1.p1.exon1MSTRG.18596.1.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.18596.1.p1.exon2MSTRG.18596.1.p1.exon2Clytia hemisphaerica_ch_hm2_pilonexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.18596.1.p1MSTRG.18596.1.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000202_pilongenomesc0000202_pilon:85147..86355 +