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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000199_pilon:575431..579688+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.18493.2.p1 ID=MSTRG.18493.2.p1|Name=MSTRG.18493.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4258bp|location=Sequence derived from alignment at sc0000199_pilon:575431..579688+ (Clytia hemisphaerica_ch_hm2_pilon)
aaagtaaaaaacaacACATCAAATGTTACAGTGTACGATGGTAGAGGTGA
GAGTTTTGAGACTTGTTCATATTCTTAAGTACTGGGaaaaaaaCTTCTAA
TTCCTAAATGGTATCTTAACAGTATTCTATAAACTATTTTGAGGTGATTT
TAGtctaatttacaaaaaaattgtcaatcttGGTCAAGTGCAACATACAT
AGTGAAATGTTTGGCAAAGTCTagtagttttattttgtttttactaATAT
AGTCTTTGAAAGTGTCTGTAGAAGGCTTTTTATACAAGGGACATCGAAGA
AGTGATTTAGCAACCTGAGTTACAAATCTAGAATGGTGCACCAAGGCAAA
ATGGTTCTCTCAAAAGAGTACAAAACCATGAAAAAGCAATCCAGTCTATC
TAAAATGATTCCCTCAAAGAgtcaatttttggaatttcgacaaaaatttg
acaattttagcttaaattttgggaaaatagtCTCAACGATATCATTTTgg
acaaaattttctaaattcagtCTCCCTTAGaaaaaaaCTCAATCTTTTGA
ACTGAGTAGAATATTTCAGATAGAAGTGAAATAGGAGAGGTTCCAATTGG
AAAGCTTTAATTTCATTTTGTGAAGATTTCTTTGATGAGAATGATAGTGA
ATGAAAAGCTGCATAAATATGGGCCTATGTATGAGGTAGTTATAAAGGCT
AATATTCCACTGAAACGTAAATTAAACTTTTTCGTGTCACCCATTTATCA
AAATTGTCTTAGTGTTAACAAGACGTACTTCAAACAGTGTAGAAAACGTA
TAGCTAATGATGAGTTGACGATATGAAATAAGGTCGATCCATGTGATATA
GGGTGGATCAAACCATGAGAGAAGCAAAGATTGTCAAGAGTATCGAAGGA
GGAATTGGAAATACACAATGAGAGAAatcctattcataaaaattttGTCT
CGACCATACAAAAGTCTATAGAATTCGAGACAAAGAGTCAGTCAGAAGGA
GGAAAATAGAAAGAGGCAAATATTTCGGAGACAAGTCAAAAGTATTTCCG
ATGCGAACGAGTGAAGTAAAAACGACAAGTATACCTTTTTATAATTACGT
aaacaaaaagcaacaacaaaaacaaaacgagaaagaaatgtttgtttgtt
atATAAATAATACGAACAATTACTGACAAAGGAGCCACACAAATAAGAGA
ATTTTGGAAGCTGAATATTTCTTCCACACaaaaaaaGAGGACACCGTATA
AAGGATAGTAAGAAACGTGATCCGGTAACTGTTATCTCTTTCACTTGTAT
ATGGTTGTTTGTATTATTGATGACATTCATTTCTTTCACACACAACAACT
TGGATGTTGTTACAAATAAAATATCATCGTTTaaaaaaaaGGGGTAGAGA
AATTTTGTATGAGtgtttataattagttgatgtttatgttgtttttcata
tgtatgtgttctgttgtttgttatAGCAGTAAAATGCTCGTTTGTGTGAG
ATTGATTTTTAGGTATGCTTTATGCAATTATCAAAACGAAGTAACAAAAC
GTGTCCCCGAAGGGGCTAAAGATGAAACTCTTAGATGGAAAATGAGGCAA
TTCGAAACATGTGGCCCGCGTGGTTTTCTTTTTACCAACTGAAAAAGTAC
CATGTctaccattatggatttgagaGTGTTCCCATCTTCCTGGGTGTGGG
GCTTTGttttggtgattcctgacatgttcctggacctctgtgcaaaattt
catctctacaccatttttgtcccggttttggcggtttatgacctaattct
acctgaATACTACCTCCTTACAACATTAACGATGTTGAGCAAGACATTGT
TTAGATGTTGTGTGCCGgtttctttgaaagtttttcgtATGAAAACGAGT
AGTTTCTGGATATATTTCCAGGTATTTATTCACTTTAAACAAACTAGAAA
ACAAAATTGGTAATAATCTAAGAGAggctttcaaatgaaaatttctctAT
ATATTTTCAGGTAGTAATTCAACATTATAAACAAACAAGAggaaaacaaa
taaacaaatataaTATTCAATGAAGAAGAATGGTACAAGACAACATTATC
AATCTCATCAAAACAACACTACATCCAATCCCTATTGTCTTTGGTGAGAA
ATACAACAAAACAGATAGTAGTAGTGGATTGAATAACAATCGTTTACTTG
TTCCAACATCAGGTATCACCAATGTCAGCTCAAATAATTATCCAGAAATA
CCTCTGGGTACAGAGATTGGTATTTCCACAGCTGTCTTCGCCGGCCTTGG
TATTCTCATTAATGCTTTGGTAATAACGGTTATAGTCATGGCCAAAACAA
GACAATATTCTACATATAAACATCTAATGCTACATTTGGCAGCCTGTGAT
TTTCTATGTTCAATTGTGTTATTGCCTTACGTGCCGTTAGAATTGAAAAG
TCATTATTGGACCTATCCAGATGCAACATGTCAAATCATCTATCCAACAA
TATCTCTCCTGACCAATGTTTCGACAGGGACGATTTTGATTATAACCATT
GAACGATTCAGAGGCGTTTGGTTCCCACACGCCCGTCAATGGGGCGGAAC
AGACGTAAAGAAAGCATTCGCCATTGTCTGGCTCATAAGTCTTGTATCCG
TACTACCCAATATCATCATGTTACGTGTGAAACAATATGACAATATAATA
TATTGTAATGAGGTTTGGGATGAAAACGATCCCACTTATAAGCGTTTGTA
TGGATTCTCATTTTTGGctgtttcttttttcattccATTACTGGGAATTA
CTATCATGCACACCTTGATTATCTGTCGATTGAAATATAAAGAACTCACA
CCGGACAACATGTCAGCTCACCAGCAACGACAGAACCAACGCATTATGAG
AGTTCTAACTGGTATTATAGCAGTCTTCTTCTGCACTGTCAGCCCAAACA
AGATATTGTATTTCGTCTGGGATGTGGACCCCCAGTTGGAAAAGGACTTG
GAATCAAATACACGATATTATTTAAGGACAGTACAATTTTTCTACTGGTC
TCGAGTAGCTATCAACCCTATGATTTATTGCTTCTTTGATACACGTTtca
agaaagatttcaaaaagtcCACTAGAAGGATGCGTGGCTTGAGTATAAGA
GACAGTGAAGTTCGAAGCCGATCGGCTAGCCAACGCACTTCCACAATACT
CTCCGTACGATCAAGAGCGAACAGTAGCTTTATAGGCGAGGCGGAAGAAG
CTATCTCTCGATGTAACCGTATGAGTAAGATCTCAAAAATGGATGCAACG
TCTTTGCAAACGTTCGTTGAAGACAGGGGACGTCGCGTACGTTCAGCCAC
GGTAGATACGGACCTAAGTGTCTCACCAATGGCCCACAGCACATTGGTAA
AACAAGGATCTAGATAAATCGAAATTTATTATTGTATATGAGGTTCtcgt
tttataagaactttaatATTTGTTAGGTGTATTATAAAATGCCGTACTTA
GGTTAACAACTCCTTCCGCCCTGTTCGAGTCTGACCAAGATTGGGGTATA
ATAGGGGAGTGGCAAAATTTCGTCGAAAAGTGCTTAAGCTGAAAGTTTAC
GCCTCACGTTTTTTATTACTTCACTCACTATAAAAAGGAGACAtttggct
tccacttttttacaacttgatggcttttaagtacgttttttcctcttttt
gaacatttATATTGCCAACTTCAACGACTTCAATTTAATTGACTCGATGA
AACATGTTTTAGCGATAATTGCTCCGACTGTCATGTAGTTTCCAATCCTT
GttttaaatgtatatttttcGGAAAGCAACAGAATCTAACGTTATACAGT
AAACATTAGATTATActtgttgaaaaatgaaaaatttgcaaGTAACAATA
GCTAATCAGATACAGATATGATTTCTGTGGCCAAACCAAAGACCTAAATA
CTTGTACTGATCGAATAAAATTCATGATGAAGCTTATTATCATATTATGT
TATAAAGATTGTATTTTTCATAAAGATTGAATATAATATAAATCATATCA
TTTTTCTTGCatttatatagaaacaagtattattacaaatatatatttta
taaaatattataataatgattatttttaataggtattctttcatatgtat
gataGTCCCCTCCTTGTAAAATTCTTGTAGCTTATTATACtcattatatt
tttaaaaagtcatATACATTATAGTATCAAAAAGAGAAAACTAAAGTTAT
ACTCACAA Coding sequence (CDS) from alignment at sc0000199_pilon:575431..579688+ >MSTRG.18493.2.p1 ID=MSTRG.18493.2.p1|Name=MSTRG.18493.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1338bp|location=Sequence derived from alignment at sc0000199_pilon:575431..579688+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGTACAAGACAACATTATCAATCTCATCAAAACAACACTACATCCAAT
CCCTATTGTCTTTGGTGAGAAATACAACAAAACAGATAGTAGTAGTGGAT
TGAATAACAATCGTTTACTTGTTCCAACATCAGGTATCACCAATGTCAGC
TCAAATAATTATCCAGAAATACCTCTGGGTACAGAGATTGGTATTTCCAC
AGCTGTCTTCGCCGGCCTTGGTATTCTCATTAATGCTTTGGTAATAACGG
TTATAGTCATGGCCAAAACAAGACAATATTCTACATATAAACATCTAATG
CTACATTTGGCAGCCTGTGATTTTCTATGTTCAATTGTGTTATTGCCTTA
CGTGCCGTTAGAATTGAAAAGTCATTATTGGACCTATCCAGATGCAACAT
GTCAAATCATCTATCCAACAATATCTCTCCTGACCAATGTTTCGACAGGG
ACGATTTTGATTATAACCATTGAACGATTCAGAGGCGTTTGGTTCCCACA
CGCCCGTCAATGGGGCGGAACAGACGTAAAGAAAGCATTCGCCATTGTCT
GGCTCATAAGTCTTGTATCCGTACTACCCAATATCATCATGTTACGTGTG
AAACAATATGACAATATAATATATTGTAATGAGGTTTGGGATGAAAACGA
TCCCACTTATAAGCGTTTGTATGGATTCTCATTTTTGGctgtttcttttt
tcattccATTACTGGGAATTACTATCATGCACACCTTGATTATCTGTCGA
TTGAAATATAAAGAACTCACACCGGACAACATGTCAGCTCACCAGCAACG
ACAGAACCAACGCATTATGAGAGTTCTAACTGGTATTATAGCAGTCTTCT
TCTGCACTGTCAGCCCAAACAAGATATTGTATTTCGTCTGGGATGTGGAC
CCCCAGTTGGAAAAGGACTTGGAATCAAATACACGATATTATTTAAGGAC
AGTACAATTTTTCTACTGGTCTCGAGTAGCTATCAACCCTATGATTTATT
GCTTCTTTGATACACGTTtcaagaaagatttcaaaaagtcCACTAGAAGG
ATGCGTGGCTTGAGTATAAGAGACAGTGAAGTTCGAAGCCGATCGGCTAG
CCAACGCACTTCCACAATACTCTCCGTACGATCAAGAGCGAACAGTAGCT
TTATAGGCGAGGCGGAAGAAGCTATCTCTCGATGTAACCGTATGAGTAAG
ATCTCAAAAATGGATGCAACGTCTTTGCAAACGTTCGTTGAAGACAGGGG
ACGTCGCGTACGTTCAGCCACGGTAGATACGGACCTAAGTGTCTCACCAA
TGGCCCACAGCACATTGGTAAAACAAGGATCTAGATAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000199_pilon | genome | sc0000199_pilon:575431..579688 + |
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