|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000199_pilon:403654..409848+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.18484.1.p1 ID=MSTRG.18484.1.p1|Name=MSTRG.18484.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=6195bp|location=Sequence derived from alignment at sc0000199_pilon:403654..409848+ (Clytia hemisphaerica_ch_hm2_pilon)
CAATAACTGACAATCTAAATGAAACCATCTGCCTTATAAATACGACCTTG
ATATCAAAATACCGAGCAGTCTATCCTGATGTTGATATATTGTCAAAGTT
TTCACAATTGATTACAAGCTACATAAAAACATCCAATATCGAAATCGTGT
GGTACAAACGGCAACAATTAAACAACTCTGTCTGGTCAATACTTTGGACA
GATTGCTTTGCTCTATACACTTTCTaccaaaataaaaatggtaTCCAATA
TTTCAACACCATGGAGACAACCATCAGCAGTCTTATTCAATCGAATGGTG
AATTAAATCAAGACTTCCAACAGTTCTTACAAAAGTACGAATTTTTCAAG
TTCATAAATATCACGACATCTGAAGGTTGTGGGGAGCCTCCAAATACACC
ACCTGACCCAAAAACACCAGTAGAAGTTCTTATGCCAGATTGTGGTGCTT
TCGAATTCCCATTAGAAGAGGATGCCTTTGTGGATGGTATTGATGGAAAT
ACAAGGAATCTGGATGTAGAGATGATGTTCGTGGATGGAAAAGCTGTTCC
TGAAGATTACTGGATAGTTCTCAATAAGACTCAATTCTTCGTGGGCTCTG
TGAATaaagaaatcattgaaaatcAGCCTGAAGGAGGATATGAATTTAAG
CTCGTAGCTACAGACAGTGGAGGATTGTCATCaactatgaaaataaaagt
caaaCATTCTGGAAAACAACTACCTAATCCAGACTACAAATTTAATGTTG
TTGGAAAAATTGcagaagattttcaaagtgaGGTTATTTCAGTGATCAAA
ATAGAAATCCTTAAGGCCGTTAGCAACTATGTTCGACCAAACCAAGTAGA
AGCCTACAAAACATTCTACTTCGAAACCTTCACTGTTGGTGATAAAATAC
GTTTTACAGTATCCCAATGCAAAGAATGTGACCCATTCCAAATTGCACCA
TTTGAGCTGATGGATAAGTCAAAAGCAGAAAGTATATTTGAGAGCATCGT
AAACGTCGAAGATGCAAACGCTGAAATATTCGATAAGTGCGACATAATTA
AAACAGTGAATCCTGATTTTCAGTTGGAGATGAAATATTGTGAATATTAT
AGATACAGCTTCGTCCAgcagtttggtgaatattttaaaaatcaacttGA
TTATAAACTCACTGACAAAAATGGAAACGACATTTCCTCGTGACTATTTC
CTGTATTTCAACAAAGATGAATTAACAGTTGAAGCTTTTCCAACACCACA
AATCTGGAATGATGCCCCAACAATCTATGAATTTCATTTCCTTGTAACTT
TTGCGTTTCAACCAAATACCCCAGCCAAATTCTTATACAATCTAACGGTA
CCAGAGGTTAGAACTTTTCCAAAGACAGCCGATTATTCAATAGTGATTCA
AACATCGGAAAGTCAAGAATTGCCAGACGGTTATTTTATCAGTAAAACGC
TAAATAACATTCGAAAGATCATCAATGATAACGAGGGAAATATAACGTTT
TACAATTTTCAGAGACTTTCGACGGACCCGTTTCAATACAGAATTGATTG
GAAAATTTGCATTGTTGGTGAAAAATGTGACAGCAGCTTTGTGAAGAATA
TAACTGAAAAACTACTGAATAATGAACTTCAACCATCAGATGATATAGTA
GCAGCATTTTCTCCTGATAGCATACAAAACATTGAAACGGAATGTGAAAA
CCGACCTCCTACAGCTATGAAAAACTACACAATAGTGATCAAACCATGCG
GGCATTTCATCTATCAGCTTCCAAGGAGTCTGGCCAAAGATGAAGAAGAC
GGAGATTTATATTCAATGTCCATTCAATTGAAAAACAAGGATGGATCTTC
ACTTGATAGAACGTCCTGGGTGCAACTTAACGAAGAGACGAAATCTATAA
TAGCAATACCTACTGCTAAAGCTTATGAAAGTCTACTCCAAACACCGTTA
AACTTTCTTTTACTCATCACCGATACTGAAGGAAAGTCGATAGAAACAAT
TCTCATATTGACTGGCGAGGAAAAATCAAGCGATTCTTATTACAGTACAA
CGATAACTTTCCAGAATAATTTGGGCACCAATGCTCCTTTTGTTGAAATT
CAAATAGTGATCCTGCGCAACATTGCTTCCACGAATAGCAGTAATTCTTT
GGATGATTATCGCTTAGTTGACTTTAAAAAGCTTGCAAGTGATGAAAGCA
GTTATCAAATGATCTATTCCATTTGTAAAATTGACGAAACTGTCTGTGTT
CCTGAAGataatgaaatcaaaacatCCGAGAAACAATTACAAAACGACGA
TGGAAAACCATCGACAGAATTGATTAACAAACTTTCTCCTGACATTCTGC
TCAAAGACATTCAGTTTACCAAGCGGTACACCATTGACGAAGTCCCAAAA
ACAGCAGAAGATTCTATTAAACTGGCAGTCGATTCTTGTTGTCATAGCAG
ATTGTATTGTttagaaaatgacatttttgtcgACAAAGAAGACGGGGAca
taaaaaacttgaaattgtCTTTGATGAGAAGAGATACTTCACCAAACAGC
GATTTTGTTGGATTAGTTGATGATTGCATTTACGTTGTGTCTTATCAAAA
CTTTCTTCCAGGTATTTACAATTTCGTTTTGGAAGCTCAAGACAAATGCA
ACAACACTAAACCTATCAATATTGAAGTTGAAGTTTTGAAGAAATGCAAA
GACGAGTTTGGTGTTGAATTTTCTGTCGACATCGAGAAACCAGCAGGaga
aaaaattgatcaaaaagatGTGTACCGCATCAAGAGTGAGCTAGAAAAAT
ACTTCAGTACTGAAGATAATATTGCAGTAATTAGCAAAGAAGAGCAAACA
TCTGGCAAATACACCCTAAATCTGGGGTATTGTACCTTGGATATCAATGC
ATGTGACTTGAAGTCAGTTGAAGAAATTATCTCCAAATTGGACGAGAATG
GCGAATCAGAACTTACaagcattttaaaaattatgaatatagAGCTACAA
GACATCAATATAGAGAGAAAAGGGGATTGCACAAAGCCCCCTTTTCCACC
TCCAGAatcaaaactcgaaaaattgGAATTCAACGTAACATATTGTGAGC
ATATGGACGTCAAAATGGCTGAAGACACATTCTTCAACCAGGAAGGATTG
TCAACTCGAGATTTTCAGTTGCAATTATTGACGGTAGGTGGCAAAGATGT
TGGGAAAGATTCTTGGATTCAATTGAATAAAACATCACAATCAATTTATG
GATATATTAGATTCAGTGACAACCAAAACCAACCCAAAGCCTTCAACTTT
ACGTTGTTTGTGAGGAAAAACGAGCAGGACCGTGGATTGAAAGTACCTCT
TTGTGTTTATGTCATTGGTGAAGAGCCTGTTCTCGACTATCAAATGAATA
TCAAGTCCACAATCTTAGGTGATGCTTCAATGCCTAACGTGTATTACGAA
ATAGAAATGACTAAATTTCTCGCAAGCTTTTTTGGAAGAGGATCACTGAA
TAATTTGGGACTAGCTCGCTCATCAAGCTCGTtgaatgaaattgaaagtt
ttaaatttagcTTTTGCAACGCAAGGAAGAAAACCATGTGATTGTGTTTT
AATTGGAGAAACAAGCTTCAAAAGCAAATGGCATAAGTTCCATGAGAAGT
GACATGTTTCAATTTAGAGAGTCAGAAAAGGAAGTTTATGGAAATTGCGC
AGAAACAAATTCACCAGAGCAAAAGGAAGACTTgataaattttattcaaa
ttgttAAAGGGAGTTACTTCAATGTATCAATACCTCCGGATTATTTTACG
GACGATGAAGATGGAGGTATGTCAAACCTGACACTGTGTATAAAAGATGA
TCAAAATCGCCAGCTCGACAAAACAAGTTGGATGAAAGTGAACCAGGAGA
AGATATGCGGTGTATACACACTGAACGAACAGCGAAATCAAGTATCCACG
AATAAGCTGATACGATATAGCTTGGTTGCAAAGGATGGTTGTGGAGAAGA
AGCAGTCGATAATTTCGTTATCAACGTAGAAGAATCTGGTATAAGTAATA
AATCATACTGCTTGATTATCGATATACCTTATGATGAATTCGCCACAAAT
TGTTCATTGattgaaaaagtcaacaaaatcaTCGCTGAAACTCTAAAAAG
ACCCACATCTGAAATCATAATATCtgacatcaaaacaaaagataatgCAA
CATTGTTCGAATGGCTTATCCAAAACAATCAAGATATCAAATGTCCAGCA
ATCGGAAACAAAACTTCAGACAAACTGACGACAAATGAAGGTCAGGTCAA
CAAAGACTTTGCAGACAGAATGAATGGAATAGGACTACCTGTTAATGACG
TAATCATTAAATGTTACGGAAACGAGGCGAGAGCAGACCCTACAGATGAC
GAAATCCCATGGTGGATTATCCTTCTCAATCATATTACTCTTATTGCTTC
TCATTTTCTTTTGGTGTCTTTGGTTGTTAATACCAAGGCTGTGCCCTGGA
TGTTGCTGTTCAAAATTATGCCCAATATTTTGCACAAGGAAAGGTGCCTT
ATCATCTGTTGCACACGAGGACTTTATAGATGGAAAAGCAGCCATTGTGA
AATCTCCATCAATAAGTAGTGCACCAGATAGTATCGATGGATTTCCGAAA
GGAGGGATAGCAAACAAGGAAATCGATACAAGCTCTTTGTCATCAGTTGA
CAAAATTTCTACGGATTCCGGTCATTTTTCGGATCCACTTGAGCTACCAC
CACTATATGATCATCAACATGGTTATATTGATTCACCGAGGAAATATTCA
AACATCTACTACAAAAACAATCACAAACAAGAGAACGACGACTGAAGGGG
ATTTCAATCGCATAGATGAGCGTGATGTTAAATTAGATTTCAACACGCAT
CGAACTGATCAAGGTCGTCACAGAAATGAAGCTTTCTATGAATCTTGGAA
TGATCCTAGACAAAGAAATAAGATGAGCGATAGACGATTAGGTTATAGAG
AAGAGTATTATCACGACAATCGACAAGCGAACATAGGCTCGTACGCTGGC
TTCAATAACTATGAAGAGAGAAGATACAACGAGCAAAGAAGAGCTCGAAG
AGCTAAAATTAAAAGAGGTGACGATCatcttcttgtaagaagaaatAAAA
GCAATAGAATAGAGAATGAAGATCGCTACCGCCGAAACTTACCACATTAT
TGACGAAAGAAATTTACGTCAAAACCACCAATCGTATGGGAACAGTTACT
CAGGTGAGGACCAAGTAACTGTAACTCTTTCAAAATCTCTACTCAACAAG
TATTTGAGAGAGCAAAACTTCAACATCCAGCAAGACAGTAGAACCCAAAA
TAAACggtattttattaaaaagagaAGTCGCAACGTGGACGCTTTGGTAG
ACAACAGATATATGAGTTCAGGTCGGAAAAATATATATTGCGTACATTCA
CCTGGTACATCGTCTTCAAATGACATTTATATTACAGACACGACAACAGG
TTATACGTCAGACACAAGTGATAGAAACTTCTATATCGTGCGACGAAAGA
GGGACGCGTCAACAACCAACAGCTCTTCAAGAAAAGCGAGACGAGTTCGA
TTAACCAAACAACATGCAGCAAGGTCAAATAATGTACACAGCCAACAGAC
ATTATAAATCGGAATCTTCTCATAGATATGGCGAAAGCAGAGGACAactt
attttgagataaatATATTAACTATCTAATCAAGAAGTAGagcaatttta
ccaaaaaagattttaacattTAGATTATATAATTTACGGTcattaacata
ttttttataagtacTAGTAAACTTTGGCAGAGACTTTCCTCGTGATTTTC
AggctaaaactggctaaaatgctcttaaaatgtttctaataCACTTAATT
AAGAAACTTGAAATAAGACCTTGTTCTTAACCATTAATGAAATATGAAGA
ACTGTACTTAATTTTTAAAgcggggggttgtacttttacggtgtgacggg
attggcccttttttagtacggtattgcgggatttgacgaaaaaaaaagac
gggaaaacggtatgtttaaaatcagacggtgacggtgtTTGGcctttttt
ttgtcattatgccggtatttgaacctgtacaaaccggtgtgacggtgtta
taattttttttcaattttcgggattccgggattcagcaaaaaatt Coding sequence (CDS) from alignment at sc0000199_pilon:403654..409848+ >MSTRG.18484.1.p1 ID=MSTRG.18484.1.p1|Name=MSTRG.18484.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2421bp|location=Sequence derived from alignment at sc0000199_pilon:403654..409848+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAAACGACATTTCCTCGTGACTATTTCCTGTATTTCAACAAAGATGA
ATTAACAGTTGAAGCTTTTCCAACACCACAAATCTGGAATGATGCCCCAA
CAATCTATGAATTTCATTTCCTTGTAACTTTTGCGTTTCAACCAAATACC
CCAGCCAAATTCTTATACAATCTAACGGTACCAGAGGTTAGAACTTTTCC
AAAGACAGCCGATTATTCAATAGTGATTCAAACATCGGAAAGTCAAGAAT
TGCCAGACGGTTATTTTATCAGTAAAACGCTAAATAACATTCGAAAGATC
ATCAATGATAACGAGGGAAATATAACGTTTTACAATTTTCAGAGACTTTC
GACGGACCCGTTTCAATACAGAATTGATTGGAAAATTTGCATTGTTGGTG
AAAAATGTGACAGCAGCTTTGTGAAGAATATAACTGAAAAACTACTGAAT
AATGAACTTCAACCATCAGATGATATAGTAGCAGCATTTTCTCCTGATAG
CATACAAAACATTGAAACGGAATGTGAAAACCGACCTCCTACAGCTATGA
AAAACTACACAATAGTGATCAAACCATGCGGGCATTTCATCTATCAGCTT
CCAAGGAGTCTGGCCAAAGATGAAGAAGACGGAGATTTATATTCAATGTC
CATTCAATTGAAAAACAAGGATGGATCTTCACTTGATAGAACGTCCTGGG
TGCAACTTAACGAAGAGACGAAATCTATAATAGCAATACCTACTGCTAAA
GCTTATGAAAGTCTACTCCAAACACCGTTAAACTTTCTTTTACTCATCAC
CGATACTGAAGGAAAGTCGATAGAAACAATTCTCATATTGACTGGCGAGG
AAAAATCAAGCGATTCTTATTACAGTACAACGATAACTTTCCAGAATAAT
TTGGGCACCAATGCTCCTTTTGTTGAAATTCAAATAGTGATCCTGCGCAA
CATTGCTTCCACGAATAGCAGTAATTCTTTGGATGATTATCGCTTAGTTG
ACTTTAAAAAGCTTGCAAGTGATGAAAGCAGTTATCAAATGATCTATTCC
ATTTGTAAAATTGACGAAACTGTCTGTGTTCCTGAAGataatgaaatcaa
aacatCCGAGAAACAATTACAAAACGACGATGGAAAACCATCGACAGAAT
TGATTAACAAACTTTCTCCTGACATTCTGCTCAAAGACATTCAGTTTACC
AAGCGGTACACCATTGACGAAGTCCCAAAAACAGCAGAAGATTCTATTAA
ACTGGCAGTCGATTCTTGTTGTCATAGCAGATTGTATTGTttagaaaatg
acatttttgtcgACAAAGAAGACGGGGAcataaaaaacttgaaattgtCT
TTGATGAGAAGAGATACTTCACCAAACAGCGATTTTGTTGGATTAGTTGA
TGATTGCATTTACGTTGTGTCTTATCAAAACTTTCTTCCAGGTATTTACA
ATTTCGTTTTGGAAGCTCAAGACAAATGCAACAACACTAAACCTATCAAT
ATTGAAGTTGAAGTTTTGAAGAAATGCAAAGACGAGTTTGGTGTTGAATT
TTCTGTCGACATCGAGAAACCAGCAGGagaaaaaattgatcaaaaagatG
TGTACCGCATCAAGAGTGAGCTAGAAAAATACTTCAGTACTGAAGATAAT
ATTGCAGTAATTAGCAAAGAAGAGCAAACATCTGGCAAATACACCCTAAA
TCTGGGGTATTGTACCTTGGATATCAATGCATGTGACTTGAAGTCAGTTG
AAGAAATTATCTCCAAATTGGACGAGAATGGCGAATCAGAACTTACaagc
attttaaaaattatgaatatagAGCTACAAGACATCAATATAGAGAGAAA
AGGGGATTGCACAAAGCCCCCTTTTCCACCTCCAGAatcaaaactcgaaa
aattgGAATTCAACGTAACATATTGTGAGCATATGGACGTCAAAATGGCT
GAAGACACATTCTTCAACCAGGAAGGATTGTCAACTCGAGATTTTCAGTT
GCAATTATTGACGGTAGGTGGCAAAGATGTTGGGAAAGATTCTTGGATTC
AATTGAATAAAACATCACAATCAATTTATGGATATATTAGATTCAGTGAC
AACCAAAACCAACCCAAAGCCTTCAACTTTACGTTGTTTGTGAGGAAAAA
CGAGCAGGACCGTGGATTGAAAGTACCTCTTTGTGTTTATGTCATTGGTG
AAGAGCCTGTTCTCGACTATCAAATGAATATCAAGTCCACAATCTTAGGT
GATGCTTCAATGCCTAACGTGTATTACGAAATAGAAATGACTAAATTTCT
CGCAAGCTTTTTTGGAAGAGGATCACTGAATAATTTGGGACTAGCTCGCT
CATCAAGCTCGTtgaatgaaattgaaagttttaaatttagcTTTTGCAAC
GCAAGGAAGAAAACCATGTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000199_pilon | genome | sc0000199_pilon:403654..409848 + |
|
