MSTRG.18362.1.p1 (mRNA) -

Overview
NameMSTRG.18362.1.p1
Unique NameMSTRG.18362.1.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000196_pilon:498942..511459+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.18362.1.p1 ID=MSTRG.18362.1.p1|Name=MSTRG.18362.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=12518bp|location=Sequence derived from alignment at sc0000196_pilon:498942..511459+ (Clytia hemisphaerica_ch_hm2_pilon)
ATCATACTAATCATCAGTGAAATCATCAGTACAAGGTGTTGTAAACATAC
ACGAATTAGCATATTAATATTTAGATTTCATTTAGGCAACATCGGTGAAC
TTTTCACCCAAATACTTGGAGAAAAGGAATGAGGTATGTAAAtgattgaa
aatagtttgttacgtaatagttatcggacagttgtgagtacaatatgaga
aatattttacgagctcCGAGCTTTTTCCGTACAacattttccgagccttt
aggcgagaatgagtaaaatatttccatattgtacgagcaaaggtctgata
actggtttatctgtgacccaaaaaatacatttttctgtgttggaaaaaag
cggtCCGGTAGAATTAGCCTGAGACCTGGACAAAATTCCCaacaagctga
aattttgcacagaggtccCCAATAGGATACTTGAccaccaaaaaaaaagc
cccatcGATTCGGACatgggaaaactttttacgGACGATTTAATTTCGGA
Cacgtccgaaaaaaaaaacttgaaaaaaaagttctcaaaatatgcaagta
ttatatatcaaaagaaagataatttcaatacgaacaaaaaaattgCCTAC
AGGAAAGCCTGGAAATCATCTCACAAAGAGTTAGGAGACCTCGAATACAT
CAtggttttcatcttctttttatattatgcttaaattctttaaaattact
ATTATGTCTAAGTTTGTTATGATTTGAGTATGATTTTTAGGTTCAAAATA
CGATTTTAAGAGATTGAGCACTCTGAAAGatctttttcattatttttgat
gCCATTGCAGTGTAAatatgtaaacattcgaatgcGAATAAGTGTTATTT
ACATTCATCAATTCATCAACTTGACAACTCCTGAAaggtatatttttcat
ttttggaaaagtAACTTTTAACATGATCTGTGTATTTCATCTGTTTTTAT
TTagagtaaaaaagaaaatattaaaagtttaaataaaaGTGTTATATTGT
AGAATGGCTTCATTGGGCAGAGTATGTATTTTATGTGAAGAAGATGTTCA
GCCAGACAATCTAGTTGAAGTCAAGAAAAAAGGCTTCGACAGACTCATTC
GAGTTGCCAAACAAAGAAATCTCGAAGATATTTGCACAGGTTTTTATATC
TCAGTAGTTTTAAGAAAATGCCCAGGAAATGTGTAAATTAGATTCATTAG
AACCTTAGAAGTATAAAGTTTTCGACAGTCCCTTTTAATAGTTTACCTAG
AAAATGCAGATTGCGGCAGTACCAGAAAATAGCGACAATCCCGTGTCAAA
GTCGTCCATAACATTCTTACCCATCATCGACCTCAGTTCATCCGACGAAA
CTTGCTTATACTCAACACTTCTATTCATTAAAGACGAGGCAAAGAAGCAC
AAAATTGAAGTACCCTGTATCACCTTTGATCAGCCTCTATGGCAGAAAGC
TATCGGGATCATACAGGATAAAAATTTGGTTATTGTGTGTCGTCTTGGTG
GGTTTCATACGTTACTTAATGAGTTTCCTTGGTAGTATTGGGAAATTGAT
GATGGGGTCTGGAATTGAGGGATTGTTTGAAGAAGTTTATGCTGAGGATA
CTGTGAAACACATGACATCAGGGAAAGCCTATGCTAGGGCATATTACGAG
TTCATTTGATGACTCAGAGTGTACTTGTGGAGCACCTCGTTGAAATCATG
GATGATGAAGGAAAGCTGCTCCCCATCAATGATTTCGAATCTTGCTACTC
AAAACTTCTGAAAGGAGAGTTGGCAGTTGAAGATCTAGTTGAGTTTGCCA
ATGGAGAAGGTGCAAAATCCTTTGAAAAGGAGATGAAGAAATTGAGTGAT
CGCTTGAATGAAGACTCGAGAACCGCCAAACTATGGATCCAATATATCAA
CTACATCGACATCGTCAAAGATTACATTATTGCAGAGTGAACATCCGATT
GGAACTTCCATCTGAAAACTTTATCTAAAATGCTGAATCTTTTTGCTGCA
ACAGGCCACGTTAACTACGCGAGAAGTGCAAAAATGTACCTCCAGCAAAT
GCCAGAACTTaaaaaaaaGTACCCGTACCTGTTCGAAAAATTCTCCGCTG
GTCAACAATCAGTGAGAATATCAAACCGCTACTGGGCTGGCTTGTGGTCT
GACCTAGTTATTGAACAAACGCTTATGCGGTCTGCTAAAAGTCGAGGTGG
GCTTACGCGAGGACAAGGAATGGAGGAGAATGTTCGTCAACTCTGGATTT
CGAGTATGAGCTATTGTGCAGCTGTCCATGATTCTATGACAACTTTGACC
GGGGTGAAAGTAATAAGTAGCGATCAACATCAAGAGATGGGGTTTTCCCG
GATCAAAACTGACAATGAACAATGAAGTTCTTCTGTTGGGTGGAGAAAAG
GAACCCTTTCATCTTCAAAGATCAGCACCTACATTCGCTTTCATCAGGCG
TTGTatcaatgaaaaacaaagacaacGTGAACTGCGAAGAGGCCGAGAAA
GTTGGTAAGAAGTTCCAGGAAACTATCGATGAAAAGGCCTTCACGGACGC
CAAACTTAAACGGAAAGACGAAGTGAAATCACTAGCAGTTATTCAAAATA
CGATAATTGTCGATGATGAACCAATAGCAGTTGACTCGACAAGCCTCTTC
ACTCGCCTGGTGGCTGTTTCtcaaagagaagaaaatgtggAAAAGTATTT
TGAGTACGAGCTGAcacagtttttttctttAaaaagaggaTTGATGAGAA
AACCTGACAAAGCATCACTGAGAAAGCTAATTTTACCAGAACAGAAATCT
TGTGATCGTTTGTCAAGTGGCTAGTTTGTTCTTGATGGTGGTGCTCTGAT
ACATATAGAGTCAGTTGGAGGAAAGGCATCACATTCATGGAAATAGCCTC
ATATCATGTCAGCTATGTGAGAGCCAACTATGGTACGTGTCGTGTCGTTT
TCGATGGCTACAATGACCCCACTTCGATAAAATCCAATGAGCACGAACGG
AGGAAGAAATCACATGGGTCCTGTCCTGACGTTGACATTTTGGAAGATAA
CGAATCAAAATACAACCGGGAACGTTTTCTTTCTAATTGGAAGAACAAAG
AACAACTGGTAGCGCTGATTGCCGAGTATCTAACTCGTGATGGCCAAAGC
GTCCATATTTGTGAAGGTGATGTTGACACCAAGATCGTATCCACAGCCTC
GGAGCTGGCAAAACAAGAATCAACAACTGTAGTTGCTGATGACACTGACG
TGGCTGTCATGATGGCGTATCACTGGCAAGAAACCACTTTTGTTCCTGTC
AGAACGAGCAAAGAAGTGTTGGGATATTGGTAGCTGTCAAGACGAggtaa
atggacaaaaaaaacatctcttgATCATCCATGCTTGGACTGGATGCGAC
TCGACATCTGCTATATGTGGCAAGGCCAAAGTCAGTTTCGTTAATCAAAT
caagaaatcagaaattttgGGCGAAGTATCTGAAGCCTCTACTGACTCTC
AATCGACCAAGGAACAAATTCAGGATGTCTCAATCGTAGCCTTCAGAGAG
ATATATGGTGGAAATCATGATAAATCACTTTCAAATTTAAGGTATAGTTT
ACATAACAGTGTAATATGTACAATAAAATGCAACCATTCTAACATTTAAG
TATTCAAATGTCCATATGTATCAGATATTTTTATGATAATTGGTTTCAAT
TTCGACCACTTCAGATACAACAAATACCTTGAGATGCTTTGCAAAGGATT
AATTCAACCTGAGCGATTGccccccccACATCTGATGCTGCAACGCAACA
TGGTGCCAGAGTTCACATCCAGGTAATCACCTCTGGCTGATCAAGTGCGA
AACCAAAACCAAACAATTTATGAACTATAATAGATGTCATTTTCGTTACT
TATTTAGGTGATTTGGTGGAAAGAACTTGATGAGAACGTCTTAGACCCAA
CAAAATGGGGTTGGCAGGGCTCTGATACAGGTCTTCGTCCAATTAGAACC
ATCAAGTCAGTCGCGCCACCCGAAATTCTCAAAATTATCAAATGTAAATG
CAAGATGTCCTCTAAGAATCCTTGTGGAACAAATCTTTGCTCTTGCCGGA
AAAATGGTGTACCATGTATACATGCGTGTGGTAATTGCCATGGCATGGAT
TGTAACAATAAAACGGAAAGATTCCATAACCATTTAAGTCTAACCGGGCC
TGAAATTTGGGGCGTAAATAAAGCTTCTTTCTTAATTCTTATATTGATGG
TTTTCTCAGGTGGAAAGGGATCAAGACGGCGAGGAGATACCAGACGAAAC
AATACACGAAGCAACATATGACACGACAATTAAAACAACAGAGGAAAATC
AGAACGAAACCTTCAATAACTTTTACGATGATAGgaatatttttgatttg
tttgattgaGGTCCTTGAAAAACGAAACCGATTgtcctttattttttatt
gataatgtaTCCACTTTAAGGCCTCATTAATCTTTGTGAGATGATTTTCA
GGTTTCTTTGTAGGCAACTTTTTTGTTCGtattgaaattatctttctttt
gatatatgacACTTGCATATTttgagaacttttttttcaagttttttttt
cggacgTGTCCGAAATTAAATCGTCcgtaaaaagttttcccatGTCCGAA
TCGATGGGGCtttttttCTGGTAGTCAAGTATCCTATTGGGGACctatgt
acaaaatttcagcttgtTGGGAATTTTGTCCAGGTTCTGGTGAAAATTTA
CATAATTCTACTGGactgcttctaccgctacaatgcaacaacatcttttg
gtcaatttatattttgtacatacaaaaatacaaaatacaaatacaaaata
caagatatattgtactctttttaaccaatcagattgctaatattttttgg
atcgccgataaaattgattaatttgaataaaattaacACTTTGACTTTGA
GCTAGTTTGGAATTTTGTGATTTGCTTTTTTCAGTCTTACTCATAATAGG
CATTTGATTATTTGACCTTTCGCAACGTAAAAAGTACCGCCAAAATTGCT
AAAATATGTTTACAATgtattaattcatgatatgcaccactggagagtct
tctgaaaacttttaaaattctccacccaatacgtcacttaaacaatagaa
aaattgacgtattgggtggaacaaaaacagaaaagttgcataattttgtG
AAATCATTGCGgtggtacatatcatgaataccaatAAACACGAATATGCT
TTATGTGAAGGTTGTCAAGACTCCAGGATTGAAAACACAACGCTCGATAT
CAGTTAACTCGGTAAGTATGTTTTACtcttatttttgaagaaaaaaatga
gccTCAATACTCCAAAGAAAAAGGGAATTTTAAGAAGTATAGCATGAATG
AATTCGAAAGGTCAAAATTAGGTGTAAAATAAGGTATTAAACCTACGAGA
AAGTTTCGGACAGTTATCAAgtaaatttagaattttcggacATGTGTATA
GTGCTACACTAAGAGATATCTTTACACGTGCATCATAGCTGGTTGAGACG
GCCAGCTTTCTGATCTGACATATTCTAAATGTAACATTTGACAACAGTTA
AGATCGTGAATTTGacttgaaagaagtcattgcatttaCGTTATTATGTG
CTGTTTTCAGTCAATCGTTGCtttttgagtgcatttttaGGCATTCTCTA
AAGATACAAAAATCTAAGCTTTAGCCCccaaatatcaaaatgcttcctac
ACTGTCTGCACCCAAAAACGTCgatgaattttgttttctttctgacGCCT
CAAATAAtcgttgaaaataaaaaaatgagccAAATGCCACTGATTTGTCA
CCTAAAGAATCTATCCTAGTGCATAGTTCCATTTGAATCCATTTTGGATG
AAAATCATTCAAGctgaaagtttaattttttaaagttactgcaccccaaa
atgtaggtgaGCCTTTTTCCCTATAGCTTCAGGTGGAACCAACAAATCTT
GTCGATTTTTTGTATGATAAGACCTAATAGAATACAGAATCGacaaaaat
tttagaataagAGAGATGATCCAGAAAGTTGTCaaaaaaaCTTGAATTGT
TTTCTACTTCATCCCAAAATGAGGGTGTATTCTTTTGTGTGTTTTCAGAG
AAAAGCAGAAAATTACGGGACTATTAATTCACAATCATTTGGTCATCTAA
ACCAAAGCATAATTGACCCCCCAAGCTCCCGGACTGCTAAAATacttata
aattattttacGGGCGTCAGATTTTCCCTGTATACTACAACGTTATGATC
TTTTtcagatgacgtcattcaaCAGTCCTTCACAACATTCTCCACAGATG
AATGAGGTTGGAAAAGATTCTTTAtatctcattatttttttattccaggT
CGATTCTaattcacgattttttttcACGATAGTCaagactttcattttaa
atCCGCTTCTACTACTAGCAGGGGGGAATTTGTTTTTTGGTCGCTGGATT
TTTTACTCAAAGCACTTATTATACATAAGTGAAAAAAGGAATGGGTAGGG
GAATggtaaggggtaggggaatcaaattctcttgggtgccaatttttttt
cggacattttGGTGTTATGTTCGGACAAATCTGACGGTCTCTGATGTTTT
TTAAGGACCATAATTTGATAGACTAGCAAAATTATAGCGGAAATTTAAAC
AAATTGGGAACAACCTGAGGCTCCAACCTCAGAAATATGCAAGAAAATGT
CGAATTTCATTAAATATTTGGGACTTGGGGCTAAGAACATACAACCATGG
ATAGTAGTACTGTTtacccaaaaatgaaaaaaaatgaaagttgccGGAAA
TCGCCTAATTGGATTTTCGTCGGAAAGTCCATAGCCCAAACCATGCTTGA
TGATGTTTAGTACTGTGTTTTCGAAGAAAATTTCGTTAATTATATCTCAT
TTTATTCCTTTTTGCTAGGCTTCCAACGAAGAAAAGACTGGGGATAGCGA
ACAGGTTCAAATCCCTTTCGAAGCTTCCATGGCACGCCTTATTGTGTATT
GTATAAGTGTACCTTATAAACATGGGGAAACCAACCCCAACTGTTGTGAA
ATGCATTATTTTAGTGTAAACCAAATTTCAACACTGGTTGAAAAATGTCC
CTTAGGTAAATATAACACTATTAcgtattattatccatatcggacattca
aacaacgtttttttctagcgtcagctAAATCTTTTCACTTCAATGCTATG
ACTTTAATAAGTTTTTAGCACCTTGCGAgtgggccgcaaatgaccaaaac
gtgtttttttctgacgttagtttagtctcttcgcttcaatgcaacaactt
caatccaattccgagcgggccgcaaatgacgttattgcccTATAACCCag
gcggttaatgatatttcagccctctgaagcctggtgctttagtttcctca
gcgcgggtatgacaatttgagtcacaaaacctttcaatagCGCCCGCCGA
TtgaatctttaatggcttacttaatgaccgctgtATGGATAATAATTGAT
GTTTGATGTGTTTCagacattgagtttGAAGCTCCAAGatggctagagag
gaatcttcaccTTTCCTAACCAAAAAGAAAGTGAAGCCTTAATTTTGCAT
AACATTTAGAAATCTTGTTTGCAAAACACACGGGTCACGTGTTCTGGATA
GGAAATTTCCAATCCAGGAGTTTCGGATCTAGCACCTTCCGgtgctttaa
aatcaatgggTTCAGACGTGCGCGAAAAATGTCCTTCTTGTAAGTGAAGA
ACACTAAAAACTATTTGAATTGTGATTTTGTGCTACCTGGTAATTTAGTT
TTTCTGTACAACTCTGTGTGCATTTTTCCTGTTTGACACAAAAGTTCACG
TTGACAAGGTCCGTGACTTTGCTtagcttattttgaaaaattctaaaaca
tATTTTAATACGACTAGTACTGCTTAACGAATCTTGggtttttctccaat
ttttacTTCTGTGTAGGAATTCCAAAAACGAcgattgttgttgttttttt
cagagATGATCTATTTGACACAACGCAAATTTATTCGAACATATCCCAAA
GCATCACGGGTAGATTCATCAAATTACAATCCTATGTTGTCATGGAGACA
CGGAATACAAATGGCTGCAATCAATGTTCAAAAACCTGGTcagttttatt
ttacttttTCTGTGCTACACGGCTTTAACATAAACCAGCAAATTTTGGCT
TGGATAGCTTTTAACCATCCGAGCAACCAAAATGATGTGCACTTTTTTAT
AAGAACACACTATATAAGAACATAATAGGCCTCGATGGCTGAATTATCAA
GAACAAATTCAGAGCACCCTAAAACATCCAATTTCTTTGGAAAATGGGTC
AAAAATACTCATAAAATGGTGAAAATAAAAACATTTTAAGAACATTTTAG
GCTTTAAACTCAAAAAATTAAGAATATCCAAAGGCTTCAAAATTGTGGAT
ATTCTTATGaaaaaacgtgtatatttatGTTTTGTTCTTGTTAATACAGA
TAATGGATTTTATATAAACGATGGACTCTTCATAAAATCTAATGGCACTG
GATACGTTTTCAAGCCGTCACAGATGACAACAAAAggtacttttttttta
aattggcgagaccaatttaatttgttgttttacgggccaagctacccaaa
aaagagggtcggtcggtctgtcggcgaaaaaatataataaaagtagaatt
tctcctataaaatctcctaaaaagtcagcaaaaactagtacatcttgaca
aaaatgtcaaatagaGAATAAAAAgacaccaaaattttgaaaatttggca
gtctgtaaagcaaacgttttaccaaaatcaatttaattttatcTCGATTT
TTGAGATTTCAGGGTTGGTCGGGCCCGTAAATCAAATCGGTCTCGCCTAA
GCATCCAAAAACTGGCTCGGAGATGATTAGATCaatactgaaaaatgctt
gaacgATATATCCTTGAGCAAAATTTTAAGCAAGACTCTGTAGCCTCAAA
AAATGTAGCTTCAAGGTAATGCTTAGAGTAGAGTCCAGTGAAGCAGACAA
GAGGATATCgctatcttgaattttttcactttcgttttcaaaaatcataa
aaaaacaaccaaacaaGAAGtacctccaaaatttgaaaaaagttggtTCA
TTAGTCATggttttatgtttgtttttctctaaaaagggtgtggatctagt
ggcatgtatttgataccacctcaagcaaagccaaaaaatgcAGTTTACCA
ACTtacaccgggccacttatcagcgccacccagtctatcaaaaagctata
agtctATTAAGCCCCCGGGCTAGGTAATCCTTAGTATACTCTTAAGTTTT
TGCCATATAATAtgatatatgcttataagttcaattcttattaaaaaaaa
attatttttataagtatGCTGATGAGGAGGACAAATTAAAACTTTATTGA
AACTCTATTTTCTTTACAGGATCTACATATCACCCTCAGATGACGAAACC
GGCTACCGGTGATTTTTCACAAAGAATGAAAATCGAGGTTTGTAAGTTAT
ATATCGAAAGTGTATCTGAAATCACTTTATTACTAGCCATCACAAAAAGT
CTCAACTGAGTGAGAAATGGAATGGAAAATCTTATTGTTTGATTTCATCA
Gcaagaaaatttcaacatttctatgatttgtgaatatttattttccattt
attcTTCGTATTTTTACAGATCTTTTGTGGTCAGTTTGTTGAAAGTGAAC
ATTTTACAGACCTACCAGTTGCTATAGAGATGGAAATTATCGGCGCCGTA
GAAAAAGATTGTCAATCTTTTTACACTGAGGTATAAATGGGGCTCATTGT
AATCGCACtaaaacactttttaatttAGCGAGGAACTTGCTTTGACGAga
cagtaaatttttttattattctgaTAAGAActaatttgtaaaaaagttgg
ttctttttccaaaaagtgaGTAATTCAGACAACAGACAAAACTAAGGTTT
TTAGGAACTTACTTTGGCGTGacgaaatttgtcaaaatttgctAAATTGG
CCAAAAGAAATTCCCTTGAGATATTTACTAAAAGACACCAGTAGCTGTTG
CTGAGGAGCTATCACAAGTGGTCTAAGGCGTTTATGTGTATGAAATTTAT
CGTAGATTAGTTTCTCTATTATTgtaaattttggccaaaactcatagaaa
aatgaaaaaaagagacTCGTTCGCAAACTTTACTCAAcgcaaaaatttta
gattctcGCTTTGCGAAGAAAAGGCTCACACAAAATTTAATCGGATTATT
TAGAGCGATAGATGGAAAGACAATCAGgccttttcatatttttattttga
gtgaaacgactgcctcgttttgaaatcacTACCAAGATGATTTCAaccat
tgagttttaagccagAAGGACTAGAGGTGAGCctcctggatggaaaatga
aaccacttatttcccattcagaacACCTGCGCATAGATTTTACACAAACG
CCTggttgaaactaaaatctatcgctagttttcaaaaaatatactcctcc
aaaacaaaggaactattagatacaatccgtcgtcatgattacggcaaGTC
ATATGCGCgttttgaatgggaaataagtgccttcaatttttcttgcctgg
gaaaggttaaagtttcgcctctagcccttcgggcttgaaactcaatgatt
tcACCCCTTGAGTCCTCAAGTGTAACTTTtgttaattcatgatatgcacc
actgcaatgtcttctgacaatACGTCACagaaccaatagctcattggttg
gaagtgacgtaaaatcagtcaatacgtcactttcaaccaatcagctattg
ggtggaacggaagacattgcaatggtgcatatcatgaatagagcaTTCTT
CTTATGAGTTTCTCCgggaatcaaaaaaatatttgtaaaataagGTAAGC
ATCACTCGTTACGTAATTCATGGACTGCGCCTGCTAAACATTATTTactt
ttatctattttttcaagCCGTCAAATAACCTGTTCAATCCTGTTTGGGAA
CgaagcactttcactttcgatttatCGTTACCCTCAATGGTATGTACTTT
TAAGGGGAAACCAAAGACTACTGATATGTATGTGATTTTTGACTTTCAAA
TTACCTTTGAATGGATAACCAGagataaaaattccatcttacCATGGTTG
TGACTTCAGCGCTTACTTTGTCGTTACGGtgatatattttactttcaacT
ATGTGTAGCCAAGCGTCGTGCGCTTTTGATATGAGATAAGTGGTTTCGTT
TCCCCAATGGAAAAGATTCAACTCAGGTTTTAAACTAAATGTTTCCCTCA
AAGTTTTTCTTAGAATGTGCTTTGAGTATTAAGTTcattagggagtggtc
agaaagtatctactagggggatggaggattctaggggtatgaaaagtttt
tcccacccttagggGAGGGtctgaaaaatattcatgtctTTAGGGGGGTT
CTTTATTAGAAAGGATAGGGGCGAAAAATATCTTGACTGGTTAGAGggtt
tgaatttattttgaGGATATCAAgggggggtgcaaattatttttggaatt
tttgaaaatatcctccATCCCACCCTACTAtaatcagcgccgaaatattt
ggcacaaaaggggaattcaaaaatgttccaataataAGGCTGacaatata
gcctggaagccacttaacccctcccaaatcgaaaaatccaatgaagcaaa
gtggaagtactgaaattgcaattctcgcccgacctttaaattctgaaaaa
cgttaaaatacctaaaattgccaatatatctCGGCGCTGATTATAGATAC
CTTCTGACTACTCCCTTAGGAaaagtttttgatgaaattacATTATGACT
GTCTTACATTTCAGTGCTTGTTGCTGGTAAAGGTTGTGAGTGTGTCACGT
GTCAACCGATTAGTTTAAAGACAGGTAATTTGTTTTGATAGAATTTCCCG
GGTACTAAAATCTCGGATTGAGGTCATCCCTGAGTATTTCCATGGTCTTT
GTGTCTTTTAACTACCTATGGCTATTTGTTGGTGAAATATCCTTACTAAT
TGTCATCGTTATCaataaacattttaaacttGTCCTTGGAACGttctttt
taaaagttttcccTTCGTGTGACTGGTTAGAAGCAAACAAAattgttgaa
tattttgaaggCCCCCTATGTGATATTTCTTCAAATCCTTGGATGAAGAT
CTTTCATTTAAGATAATTGCCCAAActattcatataatttttggatgaaa
agagATGGTTGCACGTTAATTTTTTATGGATAGTTTTGGGCTATTCAGCG
TTTTATTACTCGTTCTGTTAATCCTGTTAGCTTAAGCCGCCAGTGGAAAA
ACACCCTGGATCTTTCATTTAAGCCATATTTAAGCTCCTAatttacactt
tcttttttaACACCAATG

Coding sequence (CDS) from alignment at sc0000196_pilon:498942..511459+

>MSTRG.18362.1.p1 ID=MSTRG.18362.1.p1|Name=MSTRG.18362.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=6096bp|location=Sequence derived from alignment at sc0000196_pilon:498942..511459+ (Clytia hemisphaerica_ch_hm2_pilon)
atgacgtcattcaaCAGTCCTTCACAACATTCTCCACAGATGAATGAGGC
TTCCAACGAAGAAAAGACTGGGGATAGCGAACAGGTTCAAATCCCTTTCG
AAGCTTCCATGGCACGCCTTATTGTGTATTGTATAAGTGTACCTTATAAA
CATGGGGAAACCAACCCCAACTGTTGTGAAATGCATTATTTTAGTGTAAA
CCAAATTTCAACACTGGTTGAAAAATGTCCCTTAGagATGATCTATTTGA
CACAACGCAAATTTATTCGAACATATCCCAAAGCATCACGGGTAGATTCA
TCAAATTACAATCCTATGTTGTCATGGAGACACGGAATACAAATGGCTGC
AATCAATGTTCAAAAACCTGATAATGGATTTTATATAAACGATGGACTCT
TCATAAAATCTAATGGCACTGGATACGTTTTCAAGCCGTCACAGATGACA
ACAAAAgGATCTACATATCACCCTCAGATGACGAAACCGGCTACCGGTGA
TTTTTCACAAAGAATGAAAATCGAGATCTTTTGTGGTCAGTTTGTTGAAA
GTGAACATTTTACAGACCTACCAGTTGCTATAGAGATGGAAATTATCGGC
GCCGTAGAAAAAGATTGTCAATCTTTTTACACTGAGCCGTCAAATAACCT
GTTCAATCCTGTTTGGGAACgaagcactttcactttcgatttatCGTTAC
CCTCAATGTGCTTGTTGCTGGTAAAGGTTGTGAGTGTGTCACGTGTCAAC
CGATTAGTTTAAatgacgtcattcaaCAGTCCTTCACAACATTCTCCACA
GATGAATGAGGCTTCCAACGAAGAAAAGACTGGGGATAGCGAACAGGTTC
AAATCCCTTTCGAAGCTTCCATGGCACGCCTTATTGTGTATTGTATAAGT
GTACCTTATAAACATGGGGAAACCAACCCCAACTGTTGTGAAATGCATTA
TTTTAGTGTAAACCAAATTTCAACACTGGTTGAAAAATGTCCCTTAGagA
TGATCTATTTGACACAACGCAAATTTATTCGAACATATCCCAAAGCATCA
CGGGTAGATTCATCAAATTACAATCCTATGTTGTCATGGAGACACGGAAT
ACAAATGGCTGCAATCAATGTTCAAAAACCTGATAATGGATTTTATATAA
ACGATGGACTCTTCATAAAATCTAATGGCACTGGATACGTTTTCAAGCCG
TCACAGATGACAACAAAAgGATCTACATATCACCCTCAGATGACGAAACC
GGCTACCGGTGATTTTTCACAAAGAATGAAAATCGAGATCTTTTGTGGTC
AGTTTGTTGAAAGTGAACATTTTACAGACCTACCAGTTGCTATAGAGATG
GAAATTATCGGCGCCGTAGAAAAAGATTGTCAATCTTTTTACACTGAGCC
GTCAAATAACCTGTTCAATCCTGTTTGGGAACgaagcactttcactttcg
atttatCGTTACCCTCAATGTGCTTGTTGCTGGTAAAGGTTGTGAGTGTG
TCACGTGTCAACCGATTAGTTTAAatgacgtcattcaaCAGTCCTTCACA
ACATTCTCCACAGATGAATGAGGCTTCCAACGAAGAAAAGACTGGGGATA
GCGAACAGGTTCAAATCCCTTTCGAAGCTTCCATGGCACGCCTTATTGTG
TATTGTATAAGTGTACCTTATAAACATGGGGAAACCAACCCCAACTGTTG
TGAAATGCATTATTTTAGTGTAAACCAAATTTCAACACTGGTTGAAAAAT
GTCCCTTAGagATGATCTATTTGACACAACGCAAATTTATTCGAACATAT
CCCAAAGCATCACGGGTAGATTCATCAAATTACAATCCTATGTTGTCATG
GAGACACGGAATACAAATGGCTGCAATCAATGTTCAAAAACCTGATAATG
GATTTTATATAAACGATGGACTCTTCATAAAATCTAATGGCACTGGATAC
GTTTTCAAGCCGTCACAGATGACAACAAAAgGATCTACATATCACCCTCA
GATGACGAAACCGGCTACCGGTGATTTTTCACAAAGAATGAAAATCGAGA
TCTTTTGTGGTCAGTTTGTTGAAAGTGAACATTTTACAGACCTACCAGTT
GCTATAGAGATGGAAATTATCGGCGCCGTAGAAAAAGATTGTCAATCTTT
TTACACTGAGCCGTCAAATAACCTGTTCAATCCTGTTTGGGAACgaagca
ctttcactttcgatttatCGTTACCCTCAATGTGCTTGTTGCTGGTAAAG
GTTGTGAGTGTGTCACGTGTCAACCGATTAGTTTAAatgacgtcattcaa
CAGTCCTTCACAACATTCTCCACAGATGAATGAGGCTTCCAACGAAGAAA
AGACTGGGGATAGCGAACAGGTTCAAATCCCTTTCGAAGCTTCCATGGCA
CGCCTTATTGTGTATTGTATAAGTGTACCTTATAAACATGGGGAAACCAA
CCCCAACTGTTGTGAAATGCATTATTTTAGTGTAAACCAAATTTCAACAC
TGGTTGAAAAATGTCCCTTAGagATGATCTATTTGACACAACGCAAATTT
ATTCGAACATATCCCAAAGCATCACGGGTAGATTCATCAAATTACAATCC
TATGTTGTCATGGAGACACGGAATACAAATGGCTGCAATCAATGTTCAAA
AACCTGATAATGGATTTTATATAAACGATGGACTCTTCATAAAATCTAAT
GGCACTGGATACGTTTTCAAGCCGTCACAGATGACAACAAAAgGATCTAC
ATATCACCCTCAGATGACGAAACCGGCTACCGGTGATTTTTCACAAAGAA
TGAAAATCGAGATCTTTTGTGGTCAGTTTGTTGAAAGTGAACATTTTACA
GACCTACCAGTTGCTATAGAGATGGAAATTATCGGCGCCGTAGAAAAAGA
TTGTCAATCTTTTTACACTGAGCCGTCAAATAACCTGTTCAATCCTGTTT
GGGAACgaagcactttcactttcgatttatCGTTACCCTCAATGTGCTTG
TTGCTGGTAAAGGTTGTGAGTGTGTCACGTGTCAACCGATTAGTTTAAat
gacgtcattcaaCAGTCCTTCACAACATTCTCCACAGATGAATGAGGCTT
CCAACGAAGAAAAGACTGGGGATAGCGAACAGGTTCAAATCCCTTTCGAA
GCTTCCATGGCACGCCTTATTGTGTATTGTATAAGTGTACCTTATAAACA
TGGGGAAACCAACCCCAACTGTTGTGAAATGCATTATTTTAGTGTAAACC
AAATTTCAACACTGGTTGAAAAATGTCCCTTAGagATGATCTATTTGACA
CAACGCAAATTTATTCGAACATATCCCAAAGCATCACGGGTAGATTCATC
AAATTACAATCCTATGTTGTCATGGAGACACGGAATACAAATGGCTGCAA
TCAATGTTCAAAAACCTGATAATGGATTTTATATAAACGATGGACTCTTC
ATAAAATCTAATGGCACTGGATACGTTTTCAAGCCGTCACAGATGACAAC
AAAAgGATCTACATATCACCCTCAGATGACGAAACCGGCTACCGGTGATT
TTTCACAAAGAATGAAAATCGAGATCTTTTGTGGTCAGTTTGTTGAAAGT
GAACATTTTACAGACCTACCAGTTGCTATAGAGATGGAAATTATCGGCGC
CGTAGAAAAAGATTGTCAATCTTTTTACACTGAGCCGTCAAATAACCTGT
TCAATCCTGTTTGGGAACgaagcactttcactttcgatttatCGTTACCC
TCAATGTGCTTGTTGCTGGTAAAGGTTGTGAGTGTGTCACGTGTCAACCG
ATTAGTTTAAatgacgtcattcaaCAGTCCTTCACAACATTCTCCACAGA
TGAATGAGGCTTCCAACGAAGAAAAGACTGGGGATAGCGAACAGGTTCAA
ATCCCTTTCGAAGCTTCCATGGCACGCCTTATTGTGTATTGTATAAGTGT
ACCTTATAAACATGGGGAAACCAACCCCAACTGTTGTGAAATGCATTATT
TTAGTGTAAACCAAATTTCAACACTGGTTGAAAAATGTCCCTTAGagATG
ATCTATTTGACACAACGCAAATTTATTCGAACATATCCCAAAGCATCACG
GGTAGATTCATCAAATTACAATCCTATGTTGTCATGGAGACACGGAATAC
AAATGGCTGCAATCAATGTTCAAAAACCTGATAATGGATTTTATATAAAC
GATGGACTCTTCATAAAATCTAATGGCACTGGATACGTTTTCAAGCCGTC
ACAGATGACAACAAAAgGATCTACATATCACCCTCAGATGACGAAACCGG
CTACCGGTGATTTTTCACAAAGAATGAAAATCGAGATCTTTTGTGGTCAG
TTTGTTGAAAGTGAACATTTTACAGACCTACCAGTTGCTATAGAGATGGA
AATTATCGGCGCCGTAGAAAAAGATTGTCAATCTTTTTACACTGAGCCGT
CAAATAACCTGTTCAATCCTGTTTGGGAACgaagcactttcactttcgat
ttatCGTTACCCTCAATGTGCTTGTTGCTGGTAAAGGTTGTGAGTGTGTC
ACGTGTCAACCGATTAGTTTAAatgacgtcattcaaCAGTCCTTCACAAC
ATTCTCCACAGATGAATGAGGCTTCCAACGAAGAAAAGACTGGGGATAGC
GAACAGGTTCAAATCCCTTTCGAAGCTTCCATGGCACGCCTTATTGTGTA
TTGTATAAGTGTACCTTATAAACATGGGGAAACCAACCCCAACTGTTGTG
AAATGCATTATTTTAGTGTAAACCAAATTTCAACACTGGTTGAAAAATGT
CCCTTAGagATGATCTATTTGACACAACGCAAATTTATTCGAACATATCC
CAAAGCATCACGGGTAGATTCATCAAATTACAATCCTATGTTGTCATGGA
GACACGGAATACAAATGGCTGCAATCAATGTTCAAAAACCTGATAATGGA
TTTTATATAAACGATGGACTCTTCATAAAATCTAATGGCACTGGATACGT
TTTCAAGCCGTCACAGATGACAACAAAAgGATCTACATATCACCCTCAGA
TGACGAAACCGGCTACCGGTGATTTTTCACAAAGAATGAAAATCGAGATC
TTTTGTGGTCAGTTTGTTGAAAGTGAACATTTTACAGACCTACCAGTTGC
TATAGAGATGGAAATTATCGGCGCCGTAGAAAAAGATTGTCAATCTTTTT
ACACTGAGCCGTCAAATAACCTGTTCAATCCTGTTTGGGAACgaagcact
ttcactttcgatttatCGTTACCCTCAATGTGCTTGTTGCTGGTAAAGGT
TGTGAGTGTGTCACGTGTCAACCGATTAGTTTAAatgacgtcattcaaCA
GTCCTTCACAACATTCTCCACAGATGAATGAGGCTTCCAACGAAGAAAAG
ACTGGGGATAGCGAACAGGTTCAAATCCCTTTCGAAGCTTCCATGGCACG
CCTTATTGTGTATTGTATAAGTGTACCTTATAAACATGGGGAAACCAACC
CCAACTGTTGTGAAATGCATTATTTTAGTGTAAACCAAATTTCAACACTG
GTTGAAAAATGTCCCTTAGagATGATCTATTTGACACAACGCAAATTTAT
TCGAACATATCCCAAAGCATCACGGGTAGATTCATCAAATTACAATCCTA
TGTTGTCATGGAGACACGGAATACAAATGGCTGCAATCAATGTTCAAAAA
CCTGATAATGGATTTTATATAAACGATGGACTCTTCATAAAATCTAATGG
CACTGGATACGTTTTCAAGCCGTCACAGATGACAACAAAAgGATCTACAT
ATCACCCTCAGATGACGAAACCGGCTACCGGTGATTTTTCACAAAGAATG
AAAATCGAGATCTTTTGTGGTCAGTTTGTTGAAAGTGAACATTTTACAGA
CCTACCAGTTGCTATAGAGATGGAAATTATCGGCGCCGTAGAAAAAGATT
GTCAATCTTTTTACACTGAGCCGTCAAATAACCTGTTCAATCCTGTTTGG
GAACgaagcactttcactttcgatttatCGTTACCCTCAATGTGCTTGTT
GCTGGTAAAGGTTGTGAGTGTGTCACGTGTCAACCGATTAGTTTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.18362MSTRG.18362Clytia hemisphaerica_ch_hm2_pilongene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.18362.1.p1.exon1MSTRG.18362.1.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.18362.1.p1.exon2MSTRG.18362.1.p1.exon2Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.18362.1.p1.exon3MSTRG.18362.1.p1.exon3Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.18362.1.p1.exon4MSTRG.18362.1.p1.exon4Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.18362.1.p1.exon5MSTRG.18362.1.p1.exon5Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.18362.1.p1.exon6MSTRG.18362.1.p1.exon6Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.18362.1.p1.exon7MSTRG.18362.1.p1.exon7Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.18362.1.p1.exon8MSTRG.18362.1.p1.exon8Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.18362.1.p1.exon9MSTRG.18362.1.p1.exon9Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.18362.1.p1.exon10MSTRG.18362.1.p1.exon10Clytia hemisphaerica_ch_hm2_pilonexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.18362.1.p1MSTRG.18362.1.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000196_pilongenomesc0000196_pilon:498942..511459 +