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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000196_pilon:427023..430922+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.18355.2.p1 ID=MSTRG.18355.2.p1|Name=MSTRG.18355.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3900bp|location=Sequence derived from alignment at sc0000196_pilon:427023..430922+ (Clytia hemisphaerica_ch_hm2_pilon)
ttagccaTAATAATCAAGAGATACTATGTTTTCATATTACCATGAATGAT
AAAGGCTAAAATACTGAAATTGGTTGGCTGATAAAGTTAAAATGTTGACC
GTTggattgttgttttgttttatccATTCATCCAATGGCAATGAATGGGT
TGAATCTATCAATAACGTTACCATCAGTGTACAGCTCAAGTCTGGTGAGA
AAATCAATtcttgtttcaataaaaaatctttgtcaTATGGCGTAATCTTA
CACTAATTTGTATCACTATCAGTCGATTATTTCATTAAATTATTTCAATA
AACTCAactaaaaaatttgagaaaatctcTGTCCTCTATAAATTTTGGGG
CaggcaaacttcaaaaatggtttaaTTTAAGTGAACTTTCGGACTCACGA
TCCTTGTGTGAAACATTTGTAATATCTGGTGGTATTTCTTGTTCTctttt
ttggggcctggggcaACTTTTTGCCCCAAAACAAGTCTATAATCTTAAAA
ATCTTACTTATAAATTTTACAATACTACCAATAATTGACTCAAAAGACAC
TGAAGTCAGCCAATGGGTTTTGCACATTGGACAGCAAACAACCCAAGCAG
TGAAGCTATCATTCATTcaataagaatatttcaggtAAAATCGCATTTTC
GAATGACCACAATCAATTGGAAATTAACTTTGGAAAGATATCAGAGATTG
CGCTAGATGGTATTACACAAGTTGGCATTTCTGGGCCTGAGAAACATCAG
TTCCCAACGTTCCTATATCAAGATTTTGTTGCAATTCCTTTAGAAGAGGT
TGGCGTATATGGACTTGATCGAATTCAGGGTGTAGACAGAAATATCACAG
CTATGAGGTAGAAGGTTAAAAATTCTTTCGGTTTTTTATGAAGAGATTAG
CCCTTTTCTCTTGCAGATAGGATCCTTCTTCACTGAAAAAAGGCCAATCT
CGTAATTTTAAGTTaggaaagcaaaaaataaagTATCGGTTTTCTCAGAA
ACTAATTTTTTAATTGGACCTTTTGCCTCGATGGCAGCGATTTACACTAG
ACGAATTTTCAAAACCTAACAAAGTCTgataatttttagaaattctgATC
TGaaggaatttcaaaattaatgacaaaaacattttgacccTTCCGAGAGA
TGCTaatgtgttttgttttttccctTATTAAATCTCTGGTTTACTGAAAC
AGTTTTCTTACCAATTTAGAAAGATATTTCAAGTCAAGAAAAACTTGGTT
GGCCCAGCTGCTTATTTTGCATTCGAGATCCTCTCCTATAACAATGACAC
TACCATTCAGAATGAAAGAACTGGTGAGCGGTACCAAGTCTTCAATGGAA
CCATCAGACTCAATATCATTATTGGTCGTTGGAAATTTTGTGGTCAAAAC
ATTCAGTGTAAAGATAAAGACCAAAAGAACGAACGTGgtcaatttttaga
ttttgagttAAATTTCAACGGAGATGAACAGCTTCGGGATCCGATTGTGA
GGACTGGGTTGCGAGCAACAAGTTTTGTACCAGGAGCCAAAAGACCATTG
ACTTATGATTATGGAGGAGTTGATGTCACTCCATCCTTCAAGGTTTGGTT
CAGATTATCTTTACCCTCTCTGCAAAAATGCATatcaggcacgacgcaac
gggtacggcaggtacggcggccgccgtaccagattttcacaaaaataccc
gaagttttcctcttcgtcggtcaaatcgctataaaatcgcttaaatttcc
tcattcgccgtaccagatataaaaagcttccgtcgtgcctgcatATTTAT
ATTTAAGAGAGAGTTAAGTATTGGTTTCACTATAACATTCATAAATTGTC
GCGTTTTTTCGACTTTATTATAACCAAAGAGCTCTAAATCCTATGGAATT
TAAATGTTGATTGAAAAGTtaaataccgtattacttcgaataaacacccc
cttcttttaaacgcccctcctaaaaggaaaattatttgataaacgccccc
ctcaaataaacgcccccttcgaatgaACGCTCCCTCtaggggaggggcgt
ttattagaaacttgtgactttaatacttcaataccAGTGTTCATTGGGTt
aaaaaaggaagattttagtcatttcttgtaaccaggGCAGTTTTGGATGC
AATTTTAGtcgttgaaccaaagaaattttcgaaattttgcactaaaaaat
cctgataaagaaccAAAACAAAGGGTATATTTGCTCAAAATATTCGACTT
TATAAACGCcctcttcttttaaacgccccctcgaataaacgcccctcctc
aAATCGAAAAAGTTGtataaacgccccgggcgtttattcgaagtaatact
gTAATGAACTTCAATTTTTAACGACTTTTGCCTTTATGATTCTCAGACTG
AAAGGTAACGAGGAATAAATACATTTTCCGAATCTTTTATTATAATTGTT
TTCTTCATGGGTCAATGATAACTTTCTGCATCAAAAGTAAAAACATCCTT
GTCCTGTCCATATAACGTTCTTATATCGAAATCCTTtagattgaaattta
aaattaaattttaaatctgTCTTGCAAATCTTTCAACTTCTTTGCTCGAT
TGTTTCTATACACTGTTTCTTTATCTTTCAGTACCAACAAAATATCACAT
GGCCTGTGTTCCCATCTCAATATCCAGACGTCAATGGAAATACCATGAAA
CTTCGATTTGCTCGATTCCCTTTCGACCAAACTGTCATTCACACTATGTA
TTTCAATGTTAGTACGAACGATTTTGTCGCACCGAGTTCTTCTGTTATGC
TAAAATGTCAGTATACTTTAATTTTGTTATTGGGAGCATGGTTTATAATG
CTTTCTGTAGCAtgaaaattttctcgaaatgtAACTTGCTTAAGGGCAGT
TTCGTGGTCTTATgggattatttttattttggtggATAATAGAttttatt
aagttttttttacatagataattatttcatatcagatttttatattgtat
attttggaataatttgattgatttcttttttaattttttaaattaaatag
agcaaatattttatataattttatgtatttaggttttagttttgattacg
ccatcatatttacattttGACTAGTCTCATATATTATAACCTCTACAATA
AAAATACTATTTTATTCATCCATTTCTTAATAGATATATAAATTACTGCA
CCTATCACCGTATCAATTCAAGACAGGCTTAAGTCCATTTTTCCAAACTT
CAGATCAGAACAAACTCTCTGAAATCTGCAAGTCAGTTTTCAAAAAGTCG
CCCAAACAAACCAGCAAAACATGATATGtttttttaagtagtgtagtggt
tatcgttCTCAACTCTCACAAGGTGGTGACGTTGCTCATGGATAAGCACT
CGTGAGAGCAACAATCCTCCCACACTTGCTCCAGTAATGTTGTAGATTCG
CAAGCACAGGGTCAATGTTGTCTTGTAAGCGCTATGATTTCCCTATCCTA
GAATAGGTAACTATCCCGGGATAATGGCCCCATGTCTTTTGCATCTGCGG
GATCTTCCTTCCATATATAAAAGGTTTATATCAAGGACTTAAGGAATTGT
TGactaaaaatgctaaaaatagacTTACTGATGTTTTGAAATGATATGGT
GATTTATTTAATACATATATCACCCACTCACTCGACGTTTCAACTATAGT
TACAGTGTCCATAAAACAGTGGAACAGAGGTTTGCTGATGGAACAAGCAT
TCAGTATTATTATCAAAACATTAAAACCGAAACATTCTTTCATttaactc
ccccccccccttattttgATTTCtcatactttaggcgtacaaactttcgc
gaggacgaaaaatcgacTTATCTTTCAATATTATTCACTGGTAGGCGGTG
Coding sequence (CDS) from alignment at sc0000196_pilon:427023..430922+ >MSTRG.18355.2.p1 ID=MSTRG.18355.2.p1|Name=MSTRG.18355.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3600bp|location=Sequence derived from alignment at sc0000196_pilon:427023..430922+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCAATGAATGGGTTGAATCTATCAATAACGTTACCATCAGTGTACAG
CTCAAGTCTGaatatttcaggtAAAATCGCATTTTCGAATGACCACAATC
AATTGGAAATTAACTTTGGAAAGATATCAGAGATTGCGCTAGATGGTATT
ACACAAGTTGGCATTTCTGGGCCTGAGAAACATCAGTTCCCAACGTTCCT
ATATCAAGATTTTGTTGCAATTCCTTTAGAAGAGGTTGGCGTATATGGAC
TTGATCGAATTCAGGGTGTAGACAGAAATATCACAGCTATGAGAAAGATA
TTTCAAGTCAAGAAAAACTTGGTTGGCCCAGCTGCTTATTTTGCATTCGA
GATCCTCTCCTATAACAATGACACTACCATTCAGAATGAAAGAACTGGTG
AGCGGTACCAAGTCTTCAATGGAACCATCAGACTCAATATCATTATTGGT
CGTTGGAAATTTTGTGGTCAAAACATTCAGTGTAAAGATAAAGACCAAAA
GAACGAACGTGgtcaatttttagattttgagttAAATTTCAACGGAGATG
AACAGCTTCGGGATCCGATTGTGAGGACTGGGTTGCGAGCAACAAGTTTT
GTACCAGGAGCCAAAAGACCATTGACTTATGATTATGGAGGAGTTGATGT
CACTCCATCCTTCAAGTACCAACAAAATATCACATGGCCTGTGTTCCCAT
CTCAATATCCAGACGTCAATGGAAATACCATGAAACTTCGATTTGCTCGA
TTCCCTTTCGACCAAACTGTCATTCACACTATGTATTTCAATGTTAGTAC
GAACGATTTTGTCGCACCGAGTTCTTCTGTTATGCTAAAATGTCAGTATA
CTTTAATTTTGTTATTGGGAGCATGGTTTATAATGCTTTCTGTAGCAtga
ATGGCAATGAATGGGTTGAATCTATCAATAACGTTACCATCAGTGTACAG
CTCAAGTCTGaatatttcaggtAAAATCGCATTTTCGAATGACCACAATC
AATTGGAAATTAACTTTGGAAAGATATCAGAGATTGCGCTAGATGGTATT
ACACAAGTTGGCATTTCTGGGCCTGAGAAACATCAGTTCCCAACGTTCCT
ATATCAAGATTTTGTTGCAATTCCTTTAGAAGAGGTTGGCGTATATGGAC
TTGATCGAATTCAGGGTGTAGACAGAAATATCACAGCTATGAGAAAGATA
TTTCAAGTCAAGAAAAACTTGGTTGGCCCAGCTGCTTATTTTGCATTCGA
GATCCTCTCCTATAACAATGACACTACCATTCAGAATGAAAGAACTGGTG
AGCGGTACCAAGTCTTCAATGGAACCATCAGACTCAATATCATTATTGGT
CGTTGGAAATTTTGTGGTCAAAACATTCAGTGTAAAGATAAAGACCAAAA
GAACGAACGTGgtcaatttttagattttgagttAAATTTCAACGGAGATG
AACAGCTTCGGGATCCGATTGTGAGGACTGGGTTGCGAGCAACAAGTTTT
GTACCAGGAGCCAAAAGACCATTGACTTATGATTATGGAGGAGTTGATGT
CACTCCATCCTTCAAGTACCAACAAAATATCACATGGCCTGTGTTCCCAT
CTCAATATCCAGACGTCAATGGAAATACCATGAAACTTCGATTTGCTCGA
TTCCCTTTCGACCAAACTGTCATTCACACTATGTATTTCAATGTTAGTAC
GAACGATTTTGTCGCACCGAGTTCTTCTGTTATGCTAAAATGTCAGTATA
CTTTAATTTTGTTATTGGGAGCATGGTTTATAATGCTTTCTGTAGCAtga
ATGGCAATGAATGGGTTGAATCTATCAATAACGTTACCATCAGTGTACAG
CTCAAGTCTGaatatttcaggtAAAATCGCATTTTCGAATGACCACAATC
AATTGGAAATTAACTTTGGAAAGATATCAGAGATTGCGCTAGATGGTATT
ACACAAGTTGGCATTTCTGGGCCTGAGAAACATCAGTTCCCAACGTTCCT
ATATCAAGATTTTGTTGCAATTCCTTTAGAAGAGGTTGGCGTATATGGAC
TTGATCGAATTCAGGGTGTAGACAGAAATATCACAGCTATGAGAAAGATA
TTTCAAGTCAAGAAAAACTTGGTTGGCCCAGCTGCTTATTTTGCATTCGA
GATCCTCTCCTATAACAATGACACTACCATTCAGAATGAAAGAACTGGTG
AGCGGTACCAAGTCTTCAATGGAACCATCAGACTCAATATCATTATTGGT
CGTTGGAAATTTTGTGGTCAAAACATTCAGTGTAAAGATAAAGACCAAAA
GAACGAACGTGgtcaatttttagattttgagttAAATTTCAACGGAGATG
AACAGCTTCGGGATCCGATTGTGAGGACTGGGTTGCGAGCAACAAGTTTT
GTACCAGGAGCCAAAAGACCATTGACTTATGATTATGGAGGAGTTGATGT
CACTCCATCCTTCAAGTACCAACAAAATATCACATGGCCTGTGTTCCCAT
CTCAATATCCAGACGTCAATGGAAATACCATGAAACTTCGATTTGCTCGA
TTCCCTTTCGACCAAACTGTCATTCACACTATGTATTTCAATGTTAGTAC
GAACGATTTTGTCGCACCGAGTTCTTCTGTTATGCTAAAATGTCAGTATA
CTTTAATTTTGTTATTGGGAGCATGGTTTATAATGCTTTCTGTAGCAtga
ATGGCAATGAATGGGTTGAATCTATCAATAACGTTACCATCAGTGTACAG
CTCAAGTCTGaatatttcaggtAAAATCGCATTTTCGAATGACCACAATC
AATTGGAAATTAACTTTGGAAAGATATCAGAGATTGCGCTAGATGGTATT
ACACAAGTTGGCATTTCTGGGCCTGAGAAACATCAGTTCCCAACGTTCCT
ATATCAAGATTTTGTTGCAATTCCTTTAGAAGAGGTTGGCGTATATGGAC
TTGATCGAATTCAGGGTGTAGACAGAAATATCACAGCTATGAGAAAGATA
TTTCAAGTCAAGAAAAACTTGGTTGGCCCAGCTGCTTATTTTGCATTCGA
GATCCTCTCCTATAACAATGACACTACCATTCAGAATGAAAGAACTGGTG
AGCGGTACCAAGTCTTCAATGGAACCATCAGACTCAATATCATTATTGGT
CGTTGGAAATTTTGTGGTCAAAACATTCAGTGTAAAGATAAAGACCAAAA
GAACGAACGTGgtcaatttttagattttgagttAAATTTCAACGGAGATG
AACAGCTTCGGGATCCGATTGTGAGGACTGGGTTGCGAGCAACAAGTTTT
GTACCAGGAGCCAAAAGACCATTGACTTATGATTATGGAGGAGTTGATGT
CACTCCATCCTTCAAGTACCAACAAAATATCACATGGCCTGTGTTCCCAT
CTCAATATCCAGACGTCAATGGAAATACCATGAAACTTCGATTTGCTCGA
TTCCCTTTCGACCAAACTGTCATTCACACTATGTATTTCAATGTTAGTAC
GAACGATTTTGTCGCACCGAGTTCTTCTGTTATGCTAAAATGTCAGTATA
CTTTAATTTTGTTATTGGGAGCATGGTTTATAATGCTTTCTGTAGCAtga
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| sc0000196_pilon | genome | sc0000196_pilon:427023..430922 + |
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