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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000182_pilon:662067..671538+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.17753.2.p1 ID=MSTRG.17753.2.p1|Name=MSTRG.17753.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=9472bp|location=Sequence derived from alignment at sc0000182_pilon:662067..671538+ (Clytia hemisphaerica_ch_hm2_pilon)
AGATGAAGTGTTTATAATAAAGAAAGATATGAATTCTGCAGCTCTTAATG
TTAACCCTTTCATGTAAGTACATTTTTTACTAATCATTACCGTCCTTTTG
TATAACATTCTAATTTCCTAAGATTCTTTTCAGTTTCAGATTTGTTTTTT
cggaatctttccgctattttccCCGGAATAACCGGAAGGAGATTGGAAAG
gttttgtttctaaaggtacggaaaatcttgtttttACTCACGGAAATGCC
TAACTTTGCCGAAGCTATTTTTTCTACAACACCCACTACGTCCTTGTCTA
TTTTCGCTAGACATGGCTGGAACCCTCCTGTGCCTAGGGGGAACTAACCA
TGTTTAGGGgtcaccaaaattttttttagatgaaCCTTGGGTGCTAGATT
CTATGTtaggtgatttttttctgaacttgtttttgtttcatcGTAAACTT
CAATATGGAATGTCTTCTGTCTAAAAAATTGTGTGTATGAGTAAAGTGGG
TGTGCGCTGAGctattttaaaaaattgtgCAATAGCACGTCTTCatactt
tttttctaatttgcagcttgttcgaaacgcaggtcacaggtcggaGGTCA
TAACACAagtcacaggtcatacaaactacGGACCGGAAAATGTAATACAC
TTGTAACATACAATTTACAACATTGAAATTATTATATGCAATGGAAATGT
TGTATACGGAATATGCTATTTAGATCAACATCAAAATATAGATCAACCCC
AAAATAATGACGTCAGAAAATATGAGGTGTGTACACCAATGTACAATAAA
ATGTCTTATGCCCAATAGAATGCTGACggtgcaagtggatatagattaaC
ATGTTTTGCTCCAAGAAAGCTGTTTAGAGACACGAAAATAGGcgtcattt
ttatcaaaaatacaaagaacgGGATAAAAATAGTCAaccattttaaaaat
ataatccTTTTGgattataaattcataaattcttgaaaggtgatgcagga
gatataatAGGAAATGATAAAGCGATTGTGTAATAGGTATTTTTCTGTCA
GCATCGATGCTGCCAGGGGGCTCTGTTTAAAGGTGAcattaataaaatca
ataaaaatatcacagtacagtatgtggcccccaaaacggcgatcaaattt
gaaatttctctcaaatctagaggaaaagagattttacaaatatttttgct
gcatgaaaacctttaacatctctactttatttcctggaagttctttttca
aaattttcaatttcaacaatatttttcaatcgaaaaatatgtagcttttt
tctaatggcccccaaaacggaggtttgaaattttagcgatttctcgagat
atctttaagatatgaatacaaattttgaccatagttttgaaatatgattt
agagggttttgggcataaattcatttgataaagttttttacagtataccc
ctggttgtcaaaatgcaggtttggggcccccaaaacggaggtgtagttaa
aatcaaattattaagcccagtggtaatagggggagaaactatgaacatat
ttgtgttctcccttaaatttacgacccgatggatgtaaaatttatgattt
ttatgaaatatttcaagattttcgatattgcaaagtccaaactgaaaatt
tagaaatcttcaaaatgacaattttgatttaacaacgtcttaataatctt
aaaacaaatctcttttgaaaatagttccattcatgtatggaataagctgt
gaaagcttaactgaaactgaaaatataaagctttaaaggtatttttctcc
tatattttgcaaaaaaaagacagaatttgccgtttttgctgattcagcga
aaagttttatatataatgccaattttttaatagaattccaagattttttg
atttttctcatatttagaattttcggttttgtcaatgctgattctaggga
tCCAAAATACtagttgaccttcaagatgctatatcttttacccaacCTCT
AAAGCTACAGATGTAtgtgcattttctgaacggcattaggtgtagaaagt
ttcctataccccgttttcataacttattttcaacatccaaggagctagag
tgagttatatgcaatttttatctaattttggtgttaaaatattttcttta
gacgcaaatatgttattttgaatccgtctcaaaccagcaaaaaaaacatg
ctcatttttaagtataaccatattctttcaaaataaacaaaaatcgttta
attctgataaatctacaagtcagaatcttcattttaatcacgacctccgt
tttgggggccgtctccatTTTGCCCCTATTGTatggaaaaatctcggaac
tcgtaaaatatttctcatattgtactcgcaactatccgataactattaca
tatctATTACCCTttttggctgaccttccagcgcagctggtttattcgcT
ATCGAAAAAGATTGATCGTTCGCTATCGAAAATTTCCTTTATTGCTATCG
ATTTCTTTTCTCGTAAATGTTGATTTTACGTTCGTATTGAATGAATTTTG
ACGTTTTGGACGAAGGGAAAATAGTGTATTTAGTATTGTTAAATTATGCC
ATGCTGGGACTGACTCCGTGCAAGTAAAATAGAAATAAGGGAAATACCTA
AGTTGTTTTGGAAGCTCAAGAAAAGGCTCAAGAAAAGAACTTCGAGGAGA
TAAATCTCGGAAAGCCTCGCCTCAAAATAcgtttttatttaaagtttttt
gaaagcgaAAATAgctctaaataaaaaaatttcgaggGTATAGATCCGTT
GCACAGCAAGCTTCGCCCTATACGGATTTAAAACTAACGCGCAATTTGTA
TGTATAGCACCAGTTATGATATTTAGACGGAGGGATATAGTTAGTTGTTT
TGAAAGCTCAGCAAACAAACTTCGAGGTGATAAATCTCGGAAAACCTCGT
CCAATACAGATTTTACAGACAAAATGTTTTGCTTCTTTATATCACCAATC
AATGTTTTTAGAATCAATTCATTTCCTTGTGGTATTCaagatttatcttt
ttttgtttctaatCCTTTTTACTTACTGAGTTCAGTGGTCAAAATAAGCT
TTTTCGTTGTGATCGattattttagcgaatcgctCGTGTTTAGTGTCACC
CGAAGGCCGACCAAAGTTTGGGCTTTAGGAACaggaaattttgaacattt
ACCCTTCTTTTTACGAATTATGCCTTTAAGATGTTTAAATTAGTTGGGTA
TAAATACTAAAACATGAAAATTGTAGATAGAAAATGATTGTTCCAAAAGA
TAACTGCGCCAAAATTAACCAAACAGTGTATGATTAATAAAGATCACTCA
AAAATTGATCGGTCATTTCTTTGAATCCGAAATTTAGCTTAAGCATACAA
ATTGCGATTGCTGCGCTTTTTCCGATGAAAATTTTCGAAcgtgaaaaaac
aaatttttggatAGCGAATAATCAATCTTTTCGATagcgaaaaataattt
ttttcgatagcaaaaattcaatcttttcgatagcgaaaaataaaactttt
cgaTAGCTAAGATCAAACTTTTCGATAGCGAAGATCAAACTTTTCGATAG
CGAAGATCAAACTTTTCGATAgcgaattttcaagttttaaataTGCGAAA
AAGACGTTTTCCGATAGCGATTGTCCTTATTCTGATTGCGAAACTTTCAT
GGTTTTGCAACATAGGGCGCGTCATAGTCTTCACTATAGATgtaaacagt
ttgaaaaaaaatatctttaatgaaacacaaagaattttcgaaaagattta
agggctctgaccatagtgaatttttcataattgctgtgtttaaaatgtgt
ttactgactgatgtaaccaacaaaactatggcatgttatacattttctgt
tagacaaactattcctgaatctgaaaattctaaaattgcattgaaaaaat
ttgatgaagaagaaaatgaagacttttgagAGGAAGAgtgtttcaacttt
gaaaagcttagtatcggcgaagaaaaaacattttgaaaaatttttcgcag
tagatggtgtatcttttaccgaacaattaaaatttttgcggaaaattttt
gtaaatgcttctttgtctcgaaatcttcaaaatagtggtttttcatcaat
ttttcatctggattttgcttaaaaaacagtcataacttttgacacatctt
tttagaaaaattttccgcaaaatttaaaaatagtttaattctttgcagac
agtgtaaagaaattttgaaacaaaaaagttaattacccattaaaactaag
cactttttgtaaaagagggtgaagCAACATaatattaacatctttttaaa
gttcataacgtcatttttgcaattaaattcttaattactcttaagggatt
cgattaaaaagcaatttataaaggcaattctttgttaaaagtgttaagga
acctgaaatataacttttatgttcaaataccaaaatcaatttttggacta
tggtcagagcccttaatgtgtcattggcttaggggtcacccaaaatattt
ggcaaccaggggtcacctgaattcttaggggggcacctaaaacctgctgc
caagccatgtaAAAAAGAGGCAAAGGAATTTCAGTGTGGAAAAAGgagtc
ttataaaaaacgacggtGATGATAAAAGAGAGAAAGATTTCGTTATCCTA
TGATGTAGGGGAATTCACTGTGTTTACGTGACTCTGTCAACTCGTGCTTG
CGGTACAAAAACTGCTGATGTATATAGTAACTATACCCAAACGACTCGGG
AGAACAATGCAACCTCGTACTGTCGAACCTGACAAGTATTCACTACACgg
ggggggtgaccttgacggccgatgGGGACGTGGCTGGAGTTTGAAAGGTG
GGCCCTGttagatatgaatttttggtaaatttaggACCCTATCAGAACGA
AAGAAATGATGCCATTTTCACACtgaaaagttgcaaaaatgcctaaaagt
agacgaaaattaaaaattcttttaactTCTATCCCGAAAATTGTCCGAAA
TAACTGGAAATAACCAAAAGTAGACCCTGCCTGTGAGAtgcacatcttga
aaattagtaaattagggaccctgtcagatatcttcagagcctaaaataGA
GACCCCGTCGTagccaattttgcctaagtgacCATCCATCCCCTCTGGCA
ACAACACCACAGATTCAGACATTTCTTCCCACACCTTCCTAAACTTTTTA
ATTCCTTCTAGGTCTGGAGATGTAACGGTTCGAAGTTGTCTAAATTTATA
TCTTGTAGGAATGAAATCCAAAACTTGACACCTCAAGCGATCGATCCTGA
GAAATGCACCAAAGACCTTTCTCTGTATGAACAAATCCACAAACATTCAC
ATACAGTTCAAGAACGTCAAACCAAACAATTTGATCTTGGAAATGGAATG
ACATTCAGAACTCCTATCGAAGCTGCGGAGTATCTTCTGTTAAGAGAATA
TGGCGAAAGCTTTCTTTTCGAAAACGATTGCCATGAACGAATACTCATAC
CACCAGAATTCACATCAAATCAATATTTCAAGAAATCAAGCGCAGTGATC
TTAGACTATGACATTAAGGGCGAAATGTTAAAAGTACTGAAGAACCTCAA
GAAACAATCACCCAATCATTGGTTCACTAAGGAGCTGGAAACCTTTGTCG
AATCGCAGCAATTACATAGTAACTCGTTTGATAATATAATACCACCGAAG
GAAATCGATCAAAATTCATTCGTTAAATGGAAATGGAATATCAAAGTCAT
GCATCTGATGATCCAATTTGCCAAAGCTGAAAACCTGAATCTACCATCAT
CAATCTTGGAACCAGATGATTTTACCCAAGGTTGTATTGACCAGATTGAT
ACATTACCACCAAGTGCAAAAAGACCAGATAGGTTGCAAGATCTAAAAAT
CATCCTCAGTACTTACAAATGGTCCAGAGCTTCGGCAAAACGAAAAATCA
ATAAGCTCATAACTGAAAACCCATTTCCAAACGTTTCAATCAAATGGATC
ATGGACTTGGAATTATCAGATACAGGAGAAAAAACCGAACATTGGTTCTT
TGAACAACTTTCTTCGAACGCAGCAGCAAACATTCTGGAAGACGCAGTCA
TACTCCAATCAGTGACTTTCATGACCAATGTTTCAAACAAGAAACACCAA
GAATTCGACTTCATCATCATCTTTTGGAAACGGAAACTGATCCTGGGAGT
AGAAATCAAACGACAATTGACAGACACCAAAGCTTTCGACCAACTTGAGA
AGTACCATAAACTATTCGAGGAAAAGTTAGGAGACCAGCTTGGACATGGA
TGGATATTCTTCCCGACAATCTGTGTTGAATATGCCAACGGATTAGGGGA
GACTCAGCATTTCATCAACAAAAACACTGACATTCCCATATGGCTATCAG
GACTCCTAAGCAGTTTCCCCATAACACCATACCAAATTCCGTTTATTCAC
CCATTGGAACAACTCAAAAAGGTTCTTCAGATCATTGTGTTCACTATACA
CATCGCCAAGAAAGATCTCCCAAGACCGATAACGTCATCTAACTGGGTAG
ACTACATTAACAACGTAATGGATACTTTGTACACGGTAGATAATATTGTT
TTCTACTCCAAAAGTCAACTACCCATAATGACAACGGACCATTCTCGata
caaaaaacttttcataaGAGGTGGATACAGTACAGGCAAGTCGTTCTTGA
TGCAAGAGAAAGCCAAGATGTTGAGCAAAGATGACAGGTACAAAGGGAAA
ATCATCTACATTTTAAAAGGAAGAACAGATCATGACCCAGACCAACTTCT
TTATCACAAACTGAAGTTGGAACTCCCAAATGTAAAATGTACTACAAATG
TAAGATTTTTAGCGAGTACTTCAATGTCTATTTTCAAATTCGCAATTAAC
TGTAGAGAaccaataaaaacaatgaacGGAGTGCTTTTCCGGACTAAGAC
TGGCTAGGGGACTGACTATTTCAAATTGACCGAACCGTTTAGCCAATAcc
atattacttcgaataaacgccctggGCGCAGGTTTTTAGGATGGGTTCTC
ATTTgatttattcgaagtaaatacGGCAAAGACAAATttcggtctgtaaa
atactacGTAACAAAATGACcgaaattttaacttttaatttcACCAGATT
TCACATCACTTTATGTAACACTGTACATCTTAGGGCTTCCAATAAATGCG
TTtgctaagctctagtttagacgacccactttttgccctgcctattctaa
ttgtgaattaaagtgggcataAAGTGGGTCGTCTAAAgtgatgcatagcc
ctcttttgacgtcaatgcaatgtcttctttcaaacctttccaagcaaaga
ttttaacaaccaactttgtgccctctttctgcctactctaacaattagaa
taggcagggcagaaagtcggccgtctaaactagagctaaataACACGAAG
GTTAACTATAGTTTCTCTTTTTCTATGATATGGTCTCTAAGACTCCAAAC
ATCTGCACTTCTATTTTCAGATGGCTCATCATAGTGAACAATACAAAGCG
GTTTTCTTAGACGAATGGGACGACATATATCCTGAAGATTTGTTCGGCAA
TGTTGAGATTGCGTGGGTTGCTCGAAAAGTTTTATACTACCGACATAGGG
ATGATCACTCTTCTGACTTTAAAGCAAAGGGCTTTCAAACAATTCAACTT
GGAACCAATTTACGCAACACGAAGGAGATCGCTAAAAGAGCCAAAATCAA
TGCTGAAAATACTTTTTCGACCGTTGCAGTAGCATTAATAAATCCACCTC
AAGTGTTTCCGAAAGGCcctcctccaatttttgttgacTCAATTAATGAA
GCGATCGCTTTAGAAcggaagaaaaataattatgacGGGATCCTAGTCGT
AGCTGATTATATCTTATACCAATCACAACCTTCACATAAAGTCGACCCAC
AAAGTAGCGGCCAAATCAAATATTGGTGGGAATTCAGGGAAAAAGATAAT
CCGTTCACATTTTTGCAAGGGAAAGGCAATGTATTTGTAACTGTTCCAAG
TTCATTGCATGGATTTGACTGGCCTACAGTTATAATTGACAGAAAACACA
GCTCAGATTGCAACATGATAATGAGATGCAAAGCCAATTTGTACATCGTT
GGGGAAGCTCAAGTCCAGGAGCCAGTAGATTTACCCTTTTCTGAATATAT
GAAGCTTGTCAATGTCAATGGCACTGAACCTACAATGTTGCTTCCGTTAA
AACAATTCGCTCGAACATGTctcaaagaaattgaaacatttaagGATACA
TCCAGAGAAGATACTAGATCGTTGTGTAGAGAGATGCTACCTTTCTTGAA
GGAAGCACTTCAAGCAATGGACAAGATCAAAACAACTGAATCTGAGGAGA
AAACTGAGAGCTTATGGAAAGTACTAGAGTTCTTTACAAGAATGATTTTA
ATCAAGCGCTTCACACCTCCTCGTATGGTTCAAGTTGCCTACAGCTTCCT
GACATTGGGTAGCACACTTGGTGATTTATCCAATAATCCAACAGTTCCAA
ATCGGGAGGCGCTTACCAAAATTGACTTCAAGCCAATTGATCGATCGTTA
GCCAACTGTCGTCTATACATTGAGGCTTTATGGGGAGCATTAGTAGAGGA
CACAGAAGAAAAACCAGAGTATTCATGGTTAAAAAATCACCGACgacaaa
tctttaaagaaagcaAGCTTGCGATTCTACTTGAACTATTTCGAACTatc
taaaaacattttcagaCAGAAAAGCTACAATGGTGGAATATGAATATGAT
GGCATTTCTGGGTATTTTAGCGTTTggtagaatttaaaaatcgggccgaa
ataatgtttttcaggctttcttttttatttgattggaTATTTCGTTTTGC
GAGAGGTAAATTGACTTCCAGTCTATATAATTAGTCTAGTCGGCCCATTC
ACAAGTCTTTAAATCTTAGATCCTAAGTCTTAAAAGTATCAGGTTAAAAC
TCTATTTTTCAAACCTAAGTTAAGACACTCAAActactttaaaattttgc
tggGAAATTTCTTTGCCCCAAAATATTATAGCAATCATTGTAAGAAGACC
GACCCATCATTTTATTCAGCATGTAATTCCTTTAGAGTAGAATTTTTGAC
AAGAAGAAATTTCGGCGAAGGGCCAATTAgcaaatttatgcaaattttgt
tttttaggaAACATCTGgacgaaattaaaaaaacaaataattttggcgag
aaataattccgataaaaatgataaaaaagtttgAGCTTGGGCGAATTTTT
AAAGCAATACGCCATTCTCCGAaattttttcccttagaataatgcatttt
tttacaattgaaattttatgtggaattttttatttgaggagtAAATTTGC
TGAATTGTGGACTGAATTTAGg Coding sequence (CDS) from alignment at sc0000182_pilon:662067..671538+ >MSTRG.17753.2.p1 ID=MSTRG.17753.2.p1|Name=MSTRG.17753.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1233bp|location=Sequence derived from alignment at sc0000182_pilon:662067..671538+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCTCATCATAGTGAACAATACAAAGCGGTTTTCTTAGACGAATGGGA
CGACATATATCCTGAAGATTTGTTCGGCAATGTTGAGATTGCGTGGGTTG
CTCGAAAAGTTTTATACTACCGACATAGGGATGATCACTCTTCTGACTTT
AAAGCAAAGGGCTTTCAAACAATTCAACTTGGAACCAATTTACGCAACAC
GAAGGAGATCGCTAAAAGAGCCAAAATCAATGCTGAAAATACTTTTTCGA
CCGTTGCAGTAGCATTAATAAATCCACCTCAAGTGTTTCCGAAAGGCcct
cctccaatttttgttgacTCAATTAATGAAGCGATCGCTTTAGAAcggaa
gaaaaataattatgacGGGATCCTAGTCGTAGCTGATTATATCTTATACC
AATCACAACCTTCACATAAAGTCGACCCACAAAGTAGCGGCCAAATCAAA
TATTGGTGGGAATTCAGGGAAAAAGATAATCCGTTCACATTTTTGCAAGG
GAAAGGCAATGTATTTGTAACTGTTCCAAGTTCATTGCATGGATTTGACT
GGCCTACAGTTATAATTGACAGAAAACACAGCTCAGATTGCAACATGATA
ATGAGATGCAAAGCCAATTTGTACATCGTTGGGGAAGCTCAAGTCCAGGA
GCCAGTAGATTTACCCTTTTCTGAATATATGAAGCTTGTCAATGTCAATG
GCACTGAACCTACAATGTTGCTTCCGTTAAAACAATTCGCTCGAACATGT
ctcaaagaaattgaaacatttaagGATACATCCAGAGAAGATACTAGATC
GTTGTGTAGAGAGATGCTACCTTTCTTGAAGGAAGCACTTCAAGCAATGG
ACAAGATCAAAACAACTGAATCTGAGGAGAAAACTGAGAGCTTATGGAAA
GTACTAGAGTTCTTTACAAGAATGATTTTAATCAAGCGCTTCACACCTCC
TCGTATGGTTCAAGTTGCCTACAGCTTCCTGACATTGGGTAGCACACTTG
GTGATTTATCCAATAATCCAACAGTTCCAAATCGGGAGGCGCTTACCAAA
ATTGACTTCAAGCCAATTGATCGATCGTTAGCCAACTGTCGTCTATACAT
TGAGGCTTTATGGGGAGCATTAGTAGAGGACACAGAAGAAAAACCAGAGT
ATTCATGGTTAAAAAATCACCGACgacaaatctttaaagaaagcaAGCTT
GCGATTCTACTTGAACTATTTCGAACTatctaa
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000182_pilon | genome | sc0000182_pilon:662067..671538 + |
|
