MSTRG.17751.1.p1 (mRNA) -

Overview
NameMSTRG.17751.1.p1
Unique NameMSTRG.17751.1.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000182_pilon:647896..652643-

Legend: exonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.17751.1.p1 ID=MSTRG.17751.1.p1|Name=MSTRG.17751.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4748bp|location=Sequence derived from alignment at sc0000182_pilon:647896..652643- (Clytia hemisphaerica_ch_hm2_pilon)
AAGTACAATGACGAAACTCTTATTGATATTTTCTCTTCTCGTGGCATTTA TCATTAAACCTTCCCATGGCTTCACTTGCGAAGATTTTTTGCTGGACAAC AAACAAGATCGAAAGATCTGTTGTAAGTTTTAAAAGTTTTAAGATTAAAA TTTTCTATGCTTTTGATAAACTATAGAAGCACATATTATTTTATTAGAAC ATCCAAAATGTGTGAAGCCTTTGGATGTTCTTAACTTTTTCAGTTTTAAG CCTAAAAATGTTATTTTCACCTTTATGTGAATATTTTTGTCCATTTTCCT AAAAATTCGATTGTTTTAGAGGCCGCAATTAGAAAAGGTCAAACTAGTTT TTCAAGCAAAAATTAGCTTTGAAAATCATTTCCTGGCTCGTTAACTCGTT CTCAAAAAGCTAAAAGAATCGCACTTTAAGATTTTTTCAATACTTAAAAA CTTGGCTTAAAAATTACTTAAGTGCAATCAGAAAGGGACGTCAAGGAGTT AAAACCTCACTATTATCCGCTTGTACCATTTTAGTTGACGATTTCGGATA CGATTTTCGTCACGAACCTTTTGGTTTGACTATCGAAGAAGCAAACGAAG AATGTGAAGATGTTTATGGTTCTGGTGGTCTCATCTCCATTCAAAATGAA GACGAAAATAAGTTCCTCATTAATGAACTCAAGTATAGGTTAGTTCAAAC AATACCCACTTCTCGAGTGATCAATCAACAGCATTGCGGGCCTCGTTTTC AAATGAAATAATTGCTCCAAATGACGTTTACACATGTAGCGTGGTGGGTC GACAAAAAGTCGGGGAATCTGGGGAGGCAAATTTCGAATATTATGATTTT GCGCCCCCTATGAAATCAATTCTTTGTAAAGCAAGCCATTTTTCATGCCC TTTTAGCGTCCTGTTATCGGACGCTGCCCCTAATAAAATCACTGAAATTT TGGTTAAAACAGCCTTTTTAGTGGAAAACCCTAGAAAAAGTGCTCCTTTT GGCCACCAACTGACGCTGCCCTACCTTTCTAAGACTACACGTTTTCTTTT AAGAAACTAGTTTTACCAAGCAGCCTCAATGTTTCTTAAGAAATCGGCCT TTTGAGCCTTAAATGTTTCTCAGATGTTTCTAAACTTTTTGATACAACCA GCCTATTTTTCATGCAAAGAAAAAAAAACAATTGTTTTGATTGGATTCTT AAAAAAAAAACGAATTAAAAAATGTAATTTTCATTCTTCTCATTCTCAGC CTCAGTATGTTTCTTAGATGTTTCTTAGTTTTTAGGCATTCTGAGCCTCA TGATTCTTAAAAGTGTGTTTCTTAAAATAAAAAAAAACGTGTACGCGAGC AAAGCGAGCGTGAAAATTTTGGGATGTTTTCTCTCTGATTCACAAACATG TTACTCGTTAACTAAACTTACATTTAATCACAATTTCTCCCTCAGGAAGT TGAAAACTGTGTTTCTTGGTATGAAAACAAATGATGAAGGGTCATACGAG TGGCTCGACCAATCACCAATGATCTACACCAACTGGGAAAATGGTATGTT ATTAAAACCGTTAAACCCCTTTCAAAAGCGACCGTAGTGCAGTAGTAGAG CATCCCCAGCCGGGTCATACAAAAGATTCCCAAAATGGTACTTGATGCCT CTCTGTGTGATGCTCAGCAATTAAGAAAAGGGACAAGGGTAAGTGGAGCA ATCCAGGGGGAAAGAGTGACGCCCTCCCCTACCCTCGGGTAGATAGCTAT CGAAAGAGGAGCCTCCGACTGCGGTCGCAGACTTAATTACACCCTCTCTC ATTTGGTATATGCGTGGATTTACTCTTATTTCGAATTAAATTTACAGTGT GTCCCGAAAAAAAACGGACAAATTTTTAAATGAAGTAAAATCCTTAAAAC TCTTTATGTGAAACGGGCTTAAAATAATTAGAATAATTAAAATAAGATTA AAATTCTCTGCTCAATAGATATTACACCCATGTCTCTCACCCCGGTTAAA CTTTATCCCACAGCGGGGATAAAGATTTCTATTGAAATCTCAATGGGGAT TGAAATTCTATTGCTCCAAGACTAAAAATGGGATGGTTTTTGAGTGCAAT TTTTAAATGGGGATGAAATCAAAATCAATTTCCCAGTGGGGCTAAAATTC TAAGGTATTTTTCTTACAGGGGACGAAAATTTTGTCAAATTTTCTAGTGA TGCTGTGACACAGGGGTGTGATATTCAATTCCCAAGATAATTGAATAGGT TTTGGAGATTATGAAATAATTAAATAAATAAGTTTATAAAATTTCGCGTA AATCATCGGAATTTTACTTCATTCAAAAATGTGTCCGCTTTTTCGGGACA CTGTTTAGCTCCGACGGATTCATACCGAGTTAAATAATGATTTTGTAGTC CGTCCACTACCATCTGGATAATGTTTTTTACAAGCACTTTATTTTCACTA TGTTTGGTGAGGAAAGAAAAAATTTTTAACGATTACTCAAATGGAAAATG GACGGACTATATGTTTAGAACGATTCCGTGTAACGTCATTTTCACCTACG ATCAGCCATTTTTCTAAGAAATGGTAAAAAGAATATTTACAGGGTGATTT AGTGACACCTTGCTTAGCTCCAAGCCTTTTAGTGTTTCCGTTTGGACCTG TGCATAGCTTCTTGTTTGTTTTTATTTCGTGGGTGGAAATCAGACAGTTA AGAACAAGCAGCTTGCTTGAGATTTGGCCTAATTGGATTTTGCAGAATCA GTATATTTGATATTTTTGTAGGTCGTCGTCCAACGATTGAGGACGAATTC TTAAATCCATGTATTGAAATAGACGTTACCGCAACTAATGGTTCATGGAG TGCTTTAGGTGAAGGTGTTTCTGAGTCATGTCCTTTAGTCAAGACAGATT ATGTGTGTAAAGTACCTTTAATTCCACCAATGGAAAGTTTCAATCATTTC GTGTCTGATGATCGCACATCGTGGGAAAGTGCTAACGACAGTTGTTCGTT ATTTCGAATGTCGCTGGTGATCATCAATGACGTGAATGAGAATAAGATGT TATATGAACTGCTGCAACAAAAGTAAGTTTGAACTCCGTATGAGAAAAGC TGTTGGATTTTTTTTTCTTCACAGAAATTAACGTTGATCAAGTTTAATCT GACTTTTTGTCAGCCAAAACAATTCTTGTATTTTTTCATGAGATTTTCTT ACCTCGGAAAGGTTTTCTAACCATAAAAGGGCTATACTTCATTGAAACAT GGATTTATTATAAAGACTCTGGATAAACATCGAATGAAACGGTGGAGAGC GAAGTATTGTCTTTTTATTGTTTCAGAAAACAATCGATGTACAGGCTTTG TCCGCAAAGGACAACTGTCATGGCGGCTCGAAGGAGTCTGATTTTGAAAA ATGATTAATACTCTTTTTTCTAAAAAGTTCTCTGACTTTTTCTGATCGTA CTTTTGCTGGCTAAAAGTTTGAAAATAAATGTTAGAATACCAACCGAATA CATTTATGAAATCTGATGTGAGAAAAACACCATCAGACGAGTAAAATCAA ACAAAATGCTTATAATGACAAGAAATTTTGAATTGGGAATATCTTTCCAA TATTTCTCCGAGAAGAGCTGAGATTGATATATATTAGACGTGAGTCTCAT AGCTCCACTGTGGTATGAAAATCTTTTAGTGGCACGTGGTGGTGCGGTGG CTTTTTTGAGGTTGAAGTTTAAGAATTTCTGGTGTCAATATTCAATTTCT TATACATAGCATGTTTTTGCACCTTTCTCGAAACTTAAAACGTCATAACG ACGTATAATTAGTAATTAACTAGATGAGTTTGAATCTCGGAGGAGAACTT AAAGTCTCATTTGGGAATTGGATAAGTGTATTTTGATGGGAAAGGCAATT AAAATGCTACGAAAAATCTTTTAATGGTGGATGGAGGGTGAACAATAATG TCATTACTGCGGACAAGGCTTGTACATGAGAAATTGGCAAAATTCAGCTC GTTGTTTTTCCAGTGTCTATAATAATTCCATGATTGAAATTATTCTCGTA TTTTTAAAGGAAAGTTATCTGTGTAATTCCATTTACTTCTATTTTATATG GAAGAAAAATCTTTCTACATAGGCTCGATTGTGATTTATGAAATTTTCTA ACCATATTTCTCTGTCTTTTCATTCTTACAGTGGTCGCGTCAGAAAGGTA TGGATTGGTTTGTCTGGGAACAAGCAAGGAAAATACCGGTGGGTCAGTGA TGACCTGTCCGTATATCGGGACTGGTGTCCGGGACATCCCAATGATATCA AGATTATCTCAGAAGTCAATGATTGTGTTACCTATACGATTGATAACGAA AAGGATGATGATAAAGGTTGTTTTAGTGTTGAGAAGTGTGACCAGGTATT ACCTTTTATTTGCGAACGTGAAACCGAGGAGCAGATTTTGTTCCGGCAAA AGATATCGGAATTGACCAAAACCATACGGGAAAATGGCGGACGCCCGTAT TGTCCGAATTGTGTGAAGAGAGAAAACGAGAAACGAGAAGCAGCAAGACA GAAAGTTGTCGATCAGAAGAAACAGGAGAAAGAAAAGAAATTGAGACGTG GAAGATTACAGTGATAAGCGTTTTTCTTTAAGAACATTCAAAATTTTTAA AACCTTCGAAATTTTCAGGCTTATAAGTATGTTCTTACGATGTTCTTAAT ACGCTTAGTTTCTTTACTCAGAATCTATTAAAATCTATTAAAATCAAT

Coding sequence (CDS) from alignment at sc0000182_pilon:647896..652643-

>MSTRG.17751.1.p1 ID=MSTRG.17751.1.p1|Name=MSTRG.17751.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=5535bp|location=Sequence derived from alignment at sc0000182_pilon:647896..652643- (Clytia hemisphaerica_ch_hm2_pilon)
TGGTCGCGTCAGAAAGGTATGGATTGGTTTGTCTGGGAACAAGCAAGGAA
AATACCGGTGGGTCAGTGATGACCTGTCCGTATATCGGGACTGGTGTCCG
GGACATCCCAATGATATCAAGATTATCTCAGAAGTCAATGATTGTGTTAC
CTATACGATTGATAACGAAAAGGATGATGATAAAGGTTGTTTTAGTGTTG
AGAAGTGTGACCAGGTATTACCTTTTATTTGCGAACGTGAAACCGAGGAG
CAGATTTTGTTCCGGCAAAAGATATCGGAATTGACCAAAACCATACGGGA
AAATGGCGGACGCCCGTATTGTCCGAATTGTGTGAAGAGAGAAAACGAGA
AACGAGAAGCAGCAAGACAGAAAGTTGTCGATCAGAAGAAACAGGAGAAA
GAAAAGAAATTGAGACGTGGAAGATTACAGTGAGTCGTCGTCCAACGATT
GAGGACGAATTCTTAAATCCATGTATTGAAATAGACGTTACCGCAACTAA
TGGTTCATGGAGTGCTTTAGGTGAAGGTGTTTCTGAGTCATGTCCTTTAG
TCAAGACAGATTATGTGTGTAAAGTACCTTTAATTCCACCAATGGAAAGT
TTCAATCATTTCGTGTCTGATGATCGCACATCGTGGGAAAGTGCTAACGA
CAGTTGTTCGTTATTTCGAATGTCGCTGGTGATCATCAATGACGTGAATG
AGAATAAGATGTTATATGAACTGCTGCAACAAAAGAAGTTGAAAACTGTG
TTTCTTGGTATGAAAACAAATGATGAAGGGTCATACGAGTGGCTCGACCA
ATCACCAATGATCTACACCAACTGGGAAAATGTTGACGATTTCGGATACG
ATTTTCGTCACGAACCTTTTGGTTTGACTATCGAAGAAGCAAACGAAGAA
TGTGAAGATGTTTATGGTTCTGGTGGTCTCATCTCCATTCAAAATGAAGA
CGAAAATAAGTTCCTCATTAATGAACTCAAGTATAGAGTACAATGACGAA
ACTCTTATTGATATTTTCTCTTCTCGTGGCATTTATCATTAAACCTTCCC
ATGGCTTCACTTGCGAAGATTTTTTGCTGGACAACAAACAAGATCGAAAG
ATCTGTTTGGTCGCGTCAGAAAGGTATGGATTGGTTTGTCTGGGAACAAG
CAAGGAAAATACCGGTGGGTCAGTGATGACCTGTCCGTATATCGGGACTG
GTGTCCGGGACATCCCAATGATATCAAGATTATCTCAGAAGTCAATGATT
GTGTTACCTATACGATTGATAACGAAAAGGATGATGATAAAGGTTGTTTT
AGTGTTGAGAAGTGTGACCAGGTATTACCTTTTATTTGCGAACGTGAAAC
CGAGGAGCAGATTTTGTTCCGGCAAAAGATATCGGAATTGACCAAAACCA
TACGGGAAAATGGCGGACGCCCGTATTGTCCGAATTGTGTGAAGAGAGAA
AACGAGAAACGAGAAGCAGCAAGACAGAAAGTTGTCGATCAGAAGAAACA
GGAGAAAGAAAAGAAATTGAGACGTGGAAGATTACAGTGAGTCGTCGTCC
AACGATTGAGGACGAATTCTTAAATCCATGTATTGAAATAGACGTTACCG
CAACTAATGGTTCATGGAGTGCTTTAGGTGAAGGTGTTTCTGAGTCATGT
CCTTTAGTCAAGACAGATTATGTGTGTAAAGTACCTTTAATTCCACCAAT
GGAAAGTTTCAATCATTTCGTGTCTGATGATCGCACATCGTGGGAAAGTG
CTAACGACAGTTGTTCGTTATTTCGAATGTCGCTGGTGATCATCAATGAC
GTGAATGAGAATAAGATGTTATATGAACTGCTGCAACAAAAGAAGTTGAA
AACTGTGTTTCTTGGTATGAAAACAAATGATGAAGGGTCATACGAGTGGC
TCGACCAATCACCAATGATCTACACCAACTGGGAAAATGTTGACGATTTC
GGATACGATTTTCGTCACGAACCTTTTGGTTTGACTATCGAAGAAGCAAA
CGAAGAATGTGAAGATGTTTATGGTTCTGGTGGTCTCATCTCCATTCAAA
ATGAAGACGAAAATAAGTTCCTCATTAATGAACTCAAGTATAGAGTACAA
TGACGAAACTCTTATTGATATTTTCTCTTCTCGTGGCATTTATCATTAAA
CCTTCCCATGGCTTCACTTGCGAAGATTTTTTGCTGGACAACAAACAAGA
TCGAAAGATCTGTTTGGTCGCGTCAGAAAGGTATGGATTGGTTTGTCTGG
GAACAAGCAAGGAAAATACCGGTGGGTCAGTGATGACCTGTCCGTATATC
GGGACTGGTGTCCGGGACATCCCAATGATATCAAGATTATCTCAGAAGTC
AATGATTGTGTTACCTATACGATTGATAACGAAAAGGATGATGATAAAGG
TTGTTTTAGTGTTGAGAAGTGTGACCAGGTATTACCTTTTATTTGCGAAC
GTGAAACCGAGGAGCAGATTTTGTTCCGGCAAAAGATATCGGAATTGACC
AAAACCATACGGGAAAATGGCGGACGCCCGTATTGTCCGAATTGTGTGAA
GAGAGAAAACGAGAAACGAGAAGCAGCAAGACAGAAAGTTGTCGATCAGA
AGAAACAGGAGAAAGAAAAGAAATTGAGACGTGGAAGATTACAGTGAGTC
GTCGTCCAACGATTGAGGACGAATTCTTAAATCCATGTATTGAAATAGAC
GTTACCGCAACTAATGGTTCATGGAGTGCTTTAGGTGAAGGTGTTTCTGA
GTCATGTCCTTTAGTCAAGACAGATTATGTGTGTAAAGTACCTTTAATTC
CACCAATGGAAAGTTTCAATCATTTCGTGTCTGATGATCGCACATCGTGG
GAAAGTGCTAACGACAGTTGTTCGTTATTTCGAATGTCGCTGGTGATCAT
CAATGACGTGAATGAGAATAAGATGTTATATGAACTGCTGCAACAAAAGA
AGTTGAAAACTGTGTTTCTTGGTATGAAAACAAATGATGAAGGGTCATAC
GAGTGGCTCGACCAATCACCAATGATCTACACCAACTGGGAAAATGTTGA
CGATTTCGGATACGATTTTCGTCACGAACCTTTTGGTTTGACTATCGAAG
AAGCAAACGAAGAATGTGAAGATGTTTATGGTTCTGGTGGTCTCATCTCC
ATTCAAAATGAAGACGAAAATAAGTTCCTCATTAATGAACTCAAGTATAG
AGTACAATGACGAAACTCTTATTGATATTTTCTCTTCTCGTGGCATTTAT
CATTAAACCTTCCCATGGCTTCACTTGCGAAGATTTTTTGCTGGACAACA
AACAAGATCGAAAGATCTGTTTGGTCGCGTCAGAAAGGTATGGATTGGTT
TGTCTGGGAACAAGCAAGGAAAATACCGGTGGGTCAGTGATGACCTGTCC
GTATATCGGGACTGGTGTCCGGGACATCCCAATGATATCAAGATTATCTC
AGAAGTCAATGATTGTGTTACCTATACGATTGATAACGAAAAGGATGATG
ATAAAGGTTGTTTTAGTGTTGAGAAGTGTGACCAGGTATTACCTTTTATT
TGCGAACGTGAAACCGAGGAGCAGATTTTGTTCCGGCAAAAGATATCGGA
ATTGACCAAAACCATACGGGAAAATGGCGGACGCCCGTATTGTCCGAATT
GTGTGAAGAGAGAAAACGAGAAACGAGAAGCAGCAAGACAGAAAGTTGTC
GATCAGAAGAAACAGGAGAAAGAAAAGAAATTGAGACGTGGAAGATTACA
GTGAGTCGTCGTCCAACGATTGAGGACGAATTCTTAAATCCATGTATTGA
AATAGACGTTACCGCAACTAATGGTTCATGGAGTGCTTTAGGTGAAGGTG
TTTCTGAGTCATGTCCTTTAGTCAAGACAGATTATGTGTGTAAAGTACCT
TTAATTCCACCAATGGAAAGTTTCAATCATTTCGTGTCTGATGATCGCAC
ATCGTGGGAAAGTGCTAACGACAGTTGTTCGTTATTTCGAATGTCGCTGG
TGATCATCAATGACGTGAATGAGAATAAGATGTTATATGAACTGCTGCAA
CAAAAGAAGTTGAAAACTGTGTTTCTTGGTATGAAAACAAATGATGAAGG
GTCATACGAGTGGCTCGACCAATCACCAATGATCTACACCAACTGGGAAA
ATGTTGACGATTTCGGATACGATTTTCGTCACGAACCTTTTGGTTTGACT
ATCGAAGAAGCAAACGAAGAATGTGAAGATGTTTATGGTTCTGGTGGTCT
CATCTCCATTCAAAATGAAGACGAAAATAAGTTCCTCATTAATGAACTCA
AGTATAGAGTACAATGACGAAACTCTTATTGATATTTTCTCTTCTCGTGG
CATTTATCATTAAACCTTCCCATGGCTTCACTTGCGAAGATTTTTTGCTG
GACAACAAACAAGATCGAAAGATCTGTTTGGTCGCGTCAGAAAGGTATGG
ATTGGTTTGTCTGGGAACAAGCAAGGAAAATACCGGTGGGTCAGTGATGA
CCTGTCCGTATATCGGGACTGGTGTCCGGGACATCCCAATGATATCAAGA
TTATCTCAGAAGTCAATGATTGTGTTACCTATACGATTGATAACGAAAAG
GATGATGATAAAGGTTGTTTTAGTGTTGAGAAGTGTGACCAGGTATTACC
TTTTATTTGCGAACGTGAAACCGAGGAGCAGATTTTGTTCCGGCAAAAGA
TATCGGAATTGACCAAAACCATACGGGAAAATGGCGGACGCCCGTATTGT
CCGAATTGTGTGAAGAGAGAAAACGAGAAACGAGAAGCAGCAAGACAGAA
AGTTGTCGATCAGAAGAAACAGGAGAAAGAAAAGAAATTGAGACGTGGAA
GATTACAGTGAGTCGTCGTCCAACGATTGAGGACGAATTCTTAAATCCAT
GTATTGAAATAGACGTTACCGCAACTAATGGTTCATGGAGTGCTTTAGGT
GAAGGTGTTTCTGAGTCATGTCCTTTAGTCAAGACAGATTATGTGTGTAA
AGTACCTTTAATTCCACCAATGGAAAGTTTCAATCATTTCGTGTCTGATG
ATCGCACATCGTGGGAAAGTGCTAACGACAGTTGTTCGTTATTTCGAATG
TCGCTGGTGATCATCAATGACGTGAATGAGAATAAGATGTTATATGAACT
GCTGCAACAAAAGAAGTTGAAAACTGTGTTTCTTGGTATGAAAACAAATG
ATGAAGGGTCATACGAGTGGCTCGACCAATCACCAATGATCTACACCAAC
TGGGAAAATGTTGACGATTTCGGATACGATTTTCGTCACGAACCTTTTGG
TTTGACTATCGAAGAAGCAAACGAAGAATGTGAAGATGTTTATGGTTCTG
GTGGTCTCATCTCCATTCAAAATGAAGACGAAAATAAGTTCCTCATTAAT
GAACTCAAGTATAGAGTACAATGACGAAACTCTTATTGATATTTTCTCTT
CTCGTGGCATTTATCATTAAACCTTCCCATGGCTTCACTTGCGAAGATTT
TTTGCTGGACAACAAACAAGATCGAAAGATCTGTT
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.17751MSTRG.17751Clytia hemisphaerica_ch_hm2_pilongene
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.17751.1.p1MSTRG.17751.1.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.17751.1.p1.exon5MSTRG.17751.1.p1.exon5Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.17751.1.p1.exon4MSTRG.17751.1.p1.exon4Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.17751.1.p1.exon3MSTRG.17751.1.p1.exon3Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.17751.1.p1.exon2MSTRG.17751.1.p1.exon2Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.17751.1.p1.exon1MSTRG.17751.1.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000182_pilongenomesc0000182_pilon:647896..652643 -