MSTRG.17750.1.p1 (mRNA) -

Overview
NameMSTRG.17750.1.p1
Unique NameMSTRG.17750.1.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000182_pilon:604731..608678-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.17750.1.p1 ID=MSTRG.17750.1.p1|Name=MSTRG.17750.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3948bp|location=Sequence derived from alignment at sc0000182_pilon:604731..608678- (Clytia hemisphaerica_ch_hm2_pilon)
TATCAAACGCTTTTCTCTGTTTGTCTGCTTGACTAATCTGTATATTTTCT
TTTCTTTAGGTGAATAAAAAACAATTCAAATTAAATCAAATTGAAAAGAA
AAATCTCCAAAACAAAATGGCTGAGGTTGAAAATGAGAAAATGGACAGCT
GTCCCTTTTGCCTCTGTAGGAAAAAGGTAATCAGTAGCGGTCTACTTGAA
TTTCACTAGTGGTGCCCTCTCGTTGTTTTTGTTTTGTTTTACTTCCTCGG
TTATTTGTAATTATTACCATGTTATAGGCTAAGGTGATTTGAGATCTTTA
TTTTAATAACCTATTTTTCATGATACCTGATGTACACGTTTTTTCATAAG
AACAAACTATATATGAACATAATGCTTCGATGGTCAAAATGTTAAGAACA
TTTTAAAGATTTTGCAGACTCTAAAACACCCAATTTTATAGGAAAATGGA
CAAAAATGCTCAAAAAATGGTGTAAATAAGAACATGTTAAGAACATTTTT
AGGTATAAAACTCAAAAAGTTAAGAGATGTTCTTAAAGGGTTAAAGATTT
TTGGATGTTTTTATAAAAAAAAAGTGGTCTACTTGAATTTCACTGGAGGT
ACTTCCCGGTTTTGTGTTTTGTGTTTTACCACTTCGGTTATTGATCATTA
TTACCGTGTTATAGGCTAGGGTGATTTGAGATGTTCATTTTAATCTATTT
TCATGATATCTGATATACAGCAAAGTGTTGCGTGTATTTCTTCTTTTTTA
TTATAGGTCAAGCAGTCTAGTCTGTTGTCACATACAAAAAGCTGTAAATT
GATGCAGAAAGAAGCAGAAGACAATATCATGACATTACAAGGTCGTAAAA
TTAAATGTTCTGAAGCTTATGAGAGGCTCTTGGAAAGTCGTGACTCAGTT
ACCAATGCAAATAAATTGATTGGGAAGTACAATCAAGAAATTGAAAATTT
GACTGGGAAATTGAAAATACTCAAACCGTGTGTAAAATTATTTTTACTCT
AAGAAACTTTCTGGTACATTATATTAGAAGATATTCCAACTAGCACATAA
CGTTCTTTCAACGTTCGTCTAACGTTAAATGGACGTTGTGAACACAAGAT
AAACGTTGAAAGAACTTTGTGAGATTCATTTTACTAACCTTAATTATAGA
CCATTGAGGGGCCAAAACTTTGGAAGAGTGGTAAATACTATTGCTCCAAA
TAAGGATATTGCCACTAATTCTTGTTTAATTTTTCTTTAGTAGTAAAACA
TGGCTTATTAATGGTATCTTCTGATAGTTACTCTGTGGTTCCTTATACAC
CCTGAAACTTGACAAAATATTATCTCATGATATTATGATTTCACCCGTAT
GTTTATGCTTTAATTTTCAGAACTAACAAAGAAGTGTCAGACTTTGAAGA
AAGCGAATTGCAACTTACTCCTATAAAACCGTGAGTATGTTAATAGGCGT
TAGGCCATCTTTTTATAAAGAGTCGTTAGAGTGTAATCCACTCCCGAGTA
TTAGCAATGGGCTTTTCAAGAAAAAAATTGAATATGGGGGTGGAGGATGT
AATATTTTTTGGAAATTTAGCACCCGGACATTGTGACTTTTGACCCCCCC
CCCGGACAGCAGATCTAACCCCCCGTACAAGCATCAGTTGACCCCCTGGA
CATTTGAAATTACCCTAAAACTCCTCAAATCCTCAAACAGAGCAAGTTTA
CCCCCCTGGACACTATATCTTCTACCCACACTATATACAGACATTTCTTG
GAAGTGCCCAATGTGAAATTTGTGAGATCGAAACCCATTCGAATCGTTTC
GCACTTCCCGTAAGTGTATATTCCCACATATATAGGGGGATTTTTGAAGA
AAGAAAATTCCTTTTTATTATAGAGCACCTGCTGTTTACTTCGTACATTA
CGGTCCGAAAACCATATTGTCAAATTTTGTTTGTCAATATATTGTGTAGT
CTAAGTAGCCCTTTAGGAACCAAGTCATTGGTATGACCAGGTCGGGACTT
GACCGACAACCCACCGGGACCGAATGTAGTTCTTTCAATGTGTTTAGAAG
CAAAGAAAAAGTATATGTTTTATTCTATTTATTCATCCATCAGGTGGTCA
AAATATGATCGTAATGACAATCAACAAAATAGCGGTTTGTTTTAAATATA
ATGTCGTTCATTGATTATTTATCATATATATTGGTTCTTTGAAACTTACC
TTAAATGAATTAATTTACACGAGAGTTATATTTTGCGAGTTTCTCAAAAT
TCGCGAAATTTGATGCTCGTAAGATTTTTTCAAACCAGAATTCTTCCCAA
AAACCTTAATTTTTTGCCAAAACCTCTAAGAAAATTATAGAAATTAGTTG
AAAAAGAGGCCGATTCACGAAAATAAATCCCACAGAAAAAATCTTTTGAA
AAAAAATTGTCTCGCAAAAATTGAGATCTTTTTTGGTACGCCTATTCTTT
ATTTCGAGCACCCCTCATAGGAGCCCCCCCCCTGCTTTAAAACAATATCA
TTGTAGTGGACAAATACCTCTTTCCATTCCCATCGTAAAATTCACGGAGC
TCTCATCCCGACTGAGACAAGTAATTGGCAATTTATAATTGAAAATGCTC
TGAAAATGGCATCCTTAGCTTCAGTAGCCAAATTCCATGATGGTGATATT
CTTAGCATATTATTCTTAATTTTTTGGATTACAAAAAAAAGCGTGAATTG
TTATCTTTTAGGAATATTCAACTCTTTCTTATTAGATTCTATGACAACGT
TGCTTCTCGATCACATCAAGGGAAACAATCAGCAAGCTCTAACCTATCTT
CTAATCAAATACAACAAGAAAGTAAACAAAACTGATCTCATAATTTTGTT
TACCAAAGCTCTCAGATTGTGCACACATAATGAAATACATGTTGCTATTC
CTATACTGCTACATTATCATCCTGAAATACTGGATATTGAGCTGCCAGAG
TTTCAAGACACTAAACCAGTATATGCTGCTCTATCTAAAGGAAATATAAT
CTTGTTCAAATACTTGTTAGACCATAGTAATCAAATTGATTTGGGAAATG
TTAATGTTGACATGTTTCAAGGACTTAAAGGTGACGAGAAGAAAATGGTT
AAGAAATTGCTGAAAAAGAAAATGTAAGGAAACTCATTCTTTTGTTGAAA
ATTACAGAGACTATTTCACAGGGGATGCAGTTCATAGGTCTTGATAATGC
AAAATGTTTGAACTTTGGTAACCTATAGGTTCTCAATTGTAATCCTATGT
CACGTCTCAAGCAATCGTCAACAGCGGGAATAAAAAAGCTTGAAAATTCC
AGTGGGGATGGTTTTGAAGTGCTATTTTAAACATTAAATTCCAAATGGGG
ATGAAATTAAAAGTCAATTACTCAGTGGGGCTGAAATTGGAGGGTATTTT
TCCCACTAAAAAAAAATTTTGGCCAAATTTCCCAGTGGGGCTGGGGTCCC
AGTGGGAGGGTCTGTGACACAAGGTTGTGAAAAGCAATTTGCAGCAGCCT
ACAGCCTCATCCCCAGCCTATTTATCTTCATTCTACTTCACTCTATGTTA
CCTGATGATGCCAGATACTACCCTGGCACTGTCTAACTTCCAACAATAAT
CTCAGCTGGCACACAACGTTGTTTCAACGTTCATCTAACGTTATATGGAC
GTTGTGAACGTTAAATAAACGTTGAAACAACGTTGTGTGCCAGCTGGGTA
ATGTAACAAAACCTAGGAGGTTGAGCTAAATCAGCCTATTCGGAATTTAA
AATATTTTTTATCATTTTTTAGGAAACTATGTGGCGATACTAAAAGTTAG
CGTAACAGGAGAGATCAATTATACACACAAATTATTGGCTACTTGAAGAA
CGCATTATTTTTGAAATAATTTATCATAACGCATTTACAGATATTTAAAG
TTAGCTTTTCTTCAGTACTAGGAATAATAAAACTATGTTATTCTTTTC

Coding sequence (CDS) from alignment at sc0000182_pilon:604731..608678-

>MSTRG.17750.1.p1 ID=MSTRG.17750.1.p1|Name=MSTRG.17750.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=4788bp|location=Sequence derived from alignment at sc0000182_pilon:604731..608678- (Clytia hemisphaerica_ch_hm2_pilon)
GAAACTATGTGGCGATACTAAAAGTTAGATTCTATGACAACGTTGCTTCT
CGATCACATCAAGGGAAACAATCAGCAAGCTCTAACCTATCTTCTAATCA
AATACAACAAGAAAGTAAACAAAACTGATCTCATAATTTTGTTTACCAAA
GCTCTCAGATTGTGCACACATAATGAAATACATGTTGCTATTCCTATACT
GCTACATTATCATCCTGAAATACTGGATATTGAGCTGCCAGAGTTTCAAG
ACACTAAACCAGTATATGCTGCTCTATCTAAAGGAAATATAATCTTGTTC
AAATACTTGTTAGACCATAGTAATCAAATTGATTTGGGAAATGTTAATGT
TGACATGTTTCAAGGACTTAAAGGTGACGAGAAGAAAATGGTTAAGAAAT
TGCTGAAAAAGAAAATGTGGTCAAAATATGATCGTAATGACAATCAACAA
AATAGCGAACTAACAAAGAAGTGTCAGACTTTGAAGAAAGCGAATTGCAA
CTTACTCCTATAAAACCGTCAAGCAGTCTAGTCTGTTGTCACATACAAAA
AGCTGTAAATTGATGCAGAAAGAAGCAGAAGACAATATCATGACATTACA
AGGTCGTAAAATTAAATGTTCTGAAGCTTATGAGAGGCTCTTGGAAAGTC
GTGACTCAGTTACCAATGCAAATAAATTGATTGGGAAGTACAATCAAGAA
ATTGAAAATTTGACTGGGAAATTGAAAATACTCAAACCATGGCTGAGGTT
GAAAATGAGAAAATGGACAGCTGTCCCTTTTGCCTCTGTAGGAAAAAGGA
AACTATGTGGCGATACTAAAAGTTAGATTCTATGACAACGTTGCTTCTCG
ATCACATCAAGGGAAACAATCAGCAAGCTCTAACCTATCTTCTAATCAAA
TACAACAAGAAAGTAAACAAAACTGATCTCATAATTTTGTTTACCAAAGC
TCTCAGATTGTGCACACATAATGAAATACATGTTGCTATTCCTATACTGC
TACATTATCATCCTGAAATACTGGATATTGAGCTGCCAGAGTTTCAAGAC
ACTAAACCAGTATATGCTGCTCTATCTAAAGGAAATATAATCTTGTTCAA
ATACTTGTTAGACCATAGTAATCAAATTGATTTGGGAAATGTTAATGTTG
ACATGTTTCAAGGACTTAAAGGTGACGAGAAGAAAATGGTTAAGAAATTG
CTGAAAAAGAAAATGTGGTCAAAATATGATCGTAATGACAATCAACAAAA
TAGCGAACTAACAAAGAAGTGTCAGACTTTGAAGAAAGCGAATTGCAACT
TACTCCTATAAAACCGTCAAGCAGTCTAGTCTGTTGTCACATACAAAAAG
CTGTAAATTGATGCAGAAAGAAGCAGAAGACAATATCATGACATTACAAG
GTCGTAAAATTAAATGTTCTGAAGCTTATGAGAGGCTCTTGGAAAGTCGT
GACTCAGTTACCAATGCAAATAAATTGATTGGGAAGTACAATCAAGAAAT
TGAAAATTTGACTGGGAAATTGAAAATACTCAAACCATGGCTGAGGTTGA
AAATGAGAAAATGGACAGCTGTCCCTTTTGCCTCTGTAGGAAAAAGGAAA
CTATGTGGCGATACTAAAAGTTAGATTCTATGACAACGTTGCTTCTCGAT
CACATCAAGGGAAACAATCAGCAAGCTCTAACCTATCTTCTAATCAAATA
CAACAAGAAAGTAAACAAAACTGATCTCATAATTTTGTTTACCAAAGCTC
TCAGATTGTGCACACATAATGAAATACATGTTGCTATTCCTATACTGCTA
CATTATCATCCTGAAATACTGGATATTGAGCTGCCAGAGTTTCAAGACAC
TAAACCAGTATATGCTGCTCTATCTAAAGGAAATATAATCTTGTTCAAAT
ACTTGTTAGACCATAGTAATCAAATTGATTTGGGAAATGTTAATGTTGAC
ATGTTTCAAGGACTTAAAGGTGACGAGAAGAAAATGGTTAAGAAATTGCT
GAAAAAGAAAATGTGGTCAAAATATGATCGTAATGACAATCAACAAAATA
GCGAACTAACAAAGAAGTGTCAGACTTTGAAGAAAGCGAATTGCAACTTA
CTCCTATAAAACCGTCAAGCAGTCTAGTCTGTTGTCACATACAAAAAGCT
GTAAATTGATGCAGAAAGAAGCAGAAGACAATATCATGACATTACAAGGT
CGTAAAATTAAATGTTCTGAAGCTTATGAGAGGCTCTTGGAAAGTCGTGA
CTCAGTTACCAATGCAAATAAATTGATTGGGAAGTACAATCAAGAAATTG
AAAATTTGACTGGGAAATTGAAAATACTCAAACCATGGCTGAGGTTGAAA
ATGAGAAAATGGACAGCTGTCCCTTTTGCCTCTGTAGGAAAAAGGAAACT
ATGTGGCGATACTAAAAGTTAGATTCTATGACAACGTTGCTTCTCGATCA
CATCAAGGGAAACAATCAGCAAGCTCTAACCTATCTTCTAATCAAATACA
ACAAGAAAGTAAACAAAACTGATCTCATAATTTTGTTTACCAAAGCTCTC
AGATTGTGCACACATAATGAAATACATGTTGCTATTCCTATACTGCTACA
TTATCATCCTGAAATACTGGATATTGAGCTGCCAGAGTTTCAAGACACTA
AACCAGTATATGCTGCTCTATCTAAAGGAAATATAATCTTGTTCAAATAC
TTGTTAGACCATAGTAATCAAATTGATTTGGGAAATGTTAATGTTGACAT
GTTTCAAGGACTTAAAGGTGACGAGAAGAAAATGGTTAAGAAATTGCTGA
AAAAGAAAATGTGGTCAAAATATGATCGTAATGACAATCAACAAAATAGC
GAACTAACAAAGAAGTGTCAGACTTTGAAGAAAGCGAATTGCAACTTACT
CCTATAAAACCGTCAAGCAGTCTAGTCTGTTGTCACATACAAAAAGCTGT
AAATTGATGCAGAAAGAAGCAGAAGACAATATCATGACATTACAAGGTCG
TAAAATTAAATGTTCTGAAGCTTATGAGAGGCTCTTGGAAAGTCGTGACT
CAGTTACCAATGCAAATAAATTGATTGGGAAGTACAATCAAGAAATTGAA
AATTTGACTGGGAAATTGAAAATACTCAAACCATGGCTGAGGTTGAAAAT
GAGAAAATGGACAGCTGTCCCTTTTGCCTCTGTAGGAAAAAGGAAACTAT
GTGGCGATACTAAAAGTTAGATTCTATGACAACGTTGCTTCTCGATCACA
TCAAGGGAAACAATCAGCAAGCTCTAACCTATCTTCTAATCAAATACAAC
AAGAAAGTAAACAAAACTGATCTCATAATTTTGTTTACCAAAGCTCTCAG
ATTGTGCACACATAATGAAATACATGTTGCTATTCCTATACTGCTACATT
ATCATCCTGAAATACTGGATATTGAGCTGCCAGAGTTTCAAGACACTAAA
CCAGTATATGCTGCTCTATCTAAAGGAAATATAATCTTGTTCAAATACTT
GTTAGACCATAGTAATCAAATTGATTTGGGAAATGTTAATGTTGACATGT
TTCAAGGACTTAAAGGTGACGAGAAGAAAATGGTTAAGAAATTGCTGAAA
AAGAAAATGTGGTCAAAATATGATCGTAATGACAATCAACAAAATAGCGA
ACTAACAAAGAAGTGTCAGACTTTGAAGAAAGCGAATTGCAACTTACTCC
TATAAAACCGTCAAGCAGTCTAGTCTGTTGTCACATACAAAAAGCTGTAA
ATTGATGCAGAAAGAAGCAGAAGACAATATCATGACATTACAAGGTCGTA
AAATTAAATGTTCTGAAGCTTATGAGAGGCTCTTGGAAAGTCGTGACTCA
GTTACCAATGCAAATAAATTGATTGGGAAGTACAATCAAGAAATTGAAAA
TTTGACTGGGAAATTGAAAATACTCAAACCATGGCTGAGGTTGAAAATGA
GAAAATGGACAGCTGTCCCTTTTGCCTCTGTAGGAAAAAGGAAACTATGT
GGCGATACTAAAAGTTAGATTCTATGACAACGTTGCTTCTCGATCACATC
AAGGGAAACAATCAGCAAGCTCTAACCTATCTTCTAATCAAATACAACAA
GAAAGTAAACAAAACTGATCTCATAATTTTGTTTACCAAAGCTCTCAGAT
TGTGCACACATAATGAAATACATGTTGCTATTCCTATACTGCTACATTAT
CATCCTGAAATACTGGATATTGAGCTGCCAGAGTTTCAAGACACTAAACC
AGTATATGCTGCTCTATCTAAAGGAAATATAATCTTGTTCAAATACTTGT
TAGACCATAGTAATCAAATTGATTTGGGAAATGTTAATGTTGACATGTTT
CAAGGACTTAAAGGTGACGAGAAGAAAATGGTTAAGAAATTGCTGAAAAA
GAAAATGTGGTCAAAATATGATCGTAATGACAATCAACAAAATAGCGAAC
TAACAAAGAAGTGTCAGACTTTGAAGAAAGCGAATTGCAACTTACTCCTA
TAAAACCGTCAAGCAGTCTAGTCTGTTGTCACATACAAAAAGCTGTAAAT
TGATGCAGAAAGAAGCAGAAGACAATATCATGACATTACAAGGTCGTAAA
ATTAAATGTTCTGAAGCTTATGAGAGGCTCTTGGAAAGTCGTGACTCAGT
TACCAATGCAAATAAATTGATTGGGAAGTACAATCAAGAAATTGAAAATT
TGACTGGGAAATTGAAAATACTCAAACCATGGCTGAGGTTGAAAATGAGA
AAATGGACAGCTGTCCCTTTTGCCTCTGTAGGAAAAAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.17750MSTRG.17750Clytia hemisphaerica_ch_hm2_pilongene
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.17750.1.p1MSTRG.17750.1.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.17750.1.p1.exon6MSTRG.17750.1.p1.exon6Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.17750.1.p1.exon5MSTRG.17750.1.p1.exon5Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.17750.1.p1.exon4MSTRG.17750.1.p1.exon4Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.17750.1.p1.exon3MSTRG.17750.1.p1.exon3Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.17750.1.p1.exon2MSTRG.17750.1.p1.exon2Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.17750.1.p1.exon1MSTRG.17750.1.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000182_pilongenomesc0000182_pilon:604731..608678 -