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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000182_pilon:610423..614413- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.17745.6.p1 ID=MSTRG.17745.6.p1|Name=MSTRG.17745.6.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3991bp|location=Sequence derived from alignment at sc0000182_pilon:610423..614413- (Clytia hemisphaerica_ch_hm2_pilon)
TTCGACGTTTATCTAACGTTCACAACGTCCATTAAACGTTAAATGAACGT
TGAAACAACGTCGTGTGCCAGCTGGCTAACAGTTTATTTTATTTTCAAGC
TTAAAAGAGAAGAACTTTTGAAGCATTGCATCAACTGTTCAGACGCAAAG
ATGATAATGCTCATGAAGAAAGATGAATATAATGAACGAAGATGGAAAAT
CCGTAAAACAATTGGTGAAGCGCGCGATATTCTTAATCAACGGGTTAGCG
ATATGGAGAAATATGAGAGGGAGGTTGAAGACCTTACTCCCAAGCTAGAA
AAAATTCGAAAGTAAATTTTCTTCTCAAATATGGATTTTCATTTCTTTAT
TTTCTGACAGTAGGCATAATAAGGGGGCAAACTTTGAATCAGTGGGCAGG
ACCATTGACTTTCAAAGCCCCCAAGGGGCAGACCCGAAACTCCTTGATTG
CATATGAAGCCAATAATTTCCCGTCCCGTTTTCACGCGTGGCCGACGTGG
TTTTCAGTAAAATCTATCGCCAGATTTCGAAAAATGTGCCGCTTAAAAAA
CAAAGAACGGACTAGATTAAATCCATCATTCTTAATGTGGCGCAAATCTT
AAGGCTTCACATTTTCTTGCTTGAAAAGGGCTAAATATTCATCTCTAGCT
CCTTCGTGGCTTTAAACTTAATGGGCGGGACGCAACCAACCGCCCCAAGA
ATTACGGAAACCGTGAAAAAACCATAGTAACACGGGAGATGAATTTCATT
ATGTTTAAATATTTGTTTAAGGCTTCAAGACACAAAGAAGAACGGCGATC
AACCTGCAAGTTTGCCTGTTGAGAAGTAAAAATATTTTTTAAAGAAGATC
TGAGAGAGAGGTCTGTAGGCTTTAAACAGTATAATCGCACGATTGGGTTA
TTTTTTCTTATTTGGCGCGCCTTATTAACCCGAGAAAAAATGTATAACAA
GTGCTTCTAACAAAACAGTCAAGCGATTCCAAAAAATCGAACAAAATTCC
CCCTACTATTTCTTCAAAATCAAGTTTTTAATAAAAATTAAAAACAAAAA
ATTCACTCGTGCAATTATTTCCGAATTGCACTCGTTATCATGTGATTACA
TATACTAATTGATTTAATATGAAGGGAAAGAAGTTGAAGAAACTCTAAAT
GCGACATCTCTTTTTCTTTTTTAGTTTCCAAGGTCACTTTGAGGATCAAG
GTAAAACATTTGTTTTTGTAAAAAAAAACATTTTATCAACCATAGATAAT
ATCTTTACCCCTTGTTTAAAACAAATTCACCGCTGTCTCGGTGACCCAGT
AAAGTTTTGAAATCCACCGAGTTGGCAATGAAGAATAAAAATTTAATGCA
TTGATTTGGGTGAGACAACAAATTTCCAAGTTTTGACCTAGGAAGAGAAT
GTCAATGATTATTGGCCGGTTTAAAGGTTTTGTTTTTAAATAAGAATGAC
ATTTGAGTGATGTTTGCTTTTACTCTTCAATTTTAATTTACAAGCTTTTT
CACATTGGATAGACACGGATGTGGAGCAAGATTGGTAGGAAAGTGGAAAA
GAAAAACATTTTTTTGTTTATTTCAGCACAATATAACAATGGCAAGACAC
TGATATGAAATACGTGTCTGATATAAAACGGGAACACTTATGTAAAAATA
AAACCTTTAAATCATCATCTCTTCGGGATCTAAAACTAGGCCATTTTTAG
CAATTTTTTTCATTGGATTATCTAACGGGTCGAATAACACCGGGTCACTG
ATACATGGGTGTACAAATGCTTTTGTTTTATTTACCTCGCTTATCTTGAG
TCTAAAACGAGACAATACAACAACACTAAGATGAAAAGCAGACACATGAG
TAACACATTAGCCTGGTTAACCAAGCCAGTTTTTACTAGGCCAAGATACG
GCTGACGGCAATATATAGCGTTATCGGTGCTTTAATGATTTTTATGATGT
ACGAAATTTTAAATTTGTCTTGAAAAACTGATATTCAGTCACAACTTACT
ATCAGATTTTACCAAGTGACTGAATCGATCTGGCTAAGATTTCTAGGCTA
GTAAAAATTTTGCGACCGCAGTCAAGGGCGACCCGAAGGCTCCCTTTTCG
TATAGCTCGTATGGATGCTCTATTTTCATGCCACGGTCGCTTTTTTTTCT
AGGCTAAGTAGCACACGAGATCCATTATCCATCACTTTTTATGTTAGGAA
TACTGACAAGCAAATTGATAAGTGGTCCAATTAGTGTTGACGATATCATG
GAGCTTGTGGAAACAATCAACAAACACCGCAATGTGAAACCAAAAATCAG
TGATTTAATCAACCATTCCATAATGTCGAGAAGTAACAAATGTTTGGCGT
TTGTTTTAACGAGGTATCATATATTAAATTCAGTGAAATTGGAAAAATAG
TGAATATTTCGCAGCGAGGATTTTTTTATTTGATTATCTTCAGTGGGGAC
AATATTTTGACCAATTTTTCCTTTGGGAAAGGGTCCCAGTGGATCTGTAA
CAAGTGGATATGTGTAACTCTTACTCGCAACAGTTTCCTCCCTGTACACC
CATAAATGCGACTTTAAACTCAGTATGATATATTTACCACCCATCCGCCC
GTCCGCCCTTAGATAATACAGCAAACTCTCACTTATTCGAACTTCTATTA
TTCGAATCTTTCTATAGTTCAAAATTGTTTCCGGTTCCCCTAAAGGAGAA
ACCCTTTTAAAAATACTTTCTATAAATTCGAATCTCTCTGTAATTCGAAC
AAATAAGATTCACCTTTCGAGTTCGAATAAACGAGAGTCGACGGTAGTAA
ACCTTTTTTTCTTTACAGGTATAAAAGCGAAATTACGGAAAAGGATATGA
AAAGGTATTGGTCAAAAGCCTTGATATGTAATCTTCACGGGATCCACCCA
TCCATACCAATCCTACTACAGTTTCATCCTAACCTTTTGAACGCCAAAGC
CGGAACAAACAAGCACAGTGGATCCGCACTTAACATAGCAATGTTTTCAC
ATTTACCAGAGCTTTTTAAATATTTAATTAATCAGCCTGGAATCGATTTA
GAACTTCTTGAGTTTGAAAAATTTGAGAAGGAAAGTCGGAAACAAATCAA
CGAGTTCAAGCAAATATTGAAACATAAAAAGTAAGTACAAAAGTCTCGTC
GATGCTTTTTTTTTAATTTCTGCAAAAAACTAGGTAGGGTCGCAAAAAAA
TAGACACTTTAGTCAAATTCAATAGAACGGGTTCTTCCAGAAAATCATTG
TACGGGATATTGGATATTTTGTCTGGGGGTAGTGAAATGAAAAGATAACA
CGACCAGTTGGTTATCACAAACAAACAATATTTAAAAGTTTTTGCTCTAG
GGGTTTTTGAATTCTTTGAGGTCTGAGGCCACTTGAAACGAAATTTCATC
AAAATGAAATATAAGCAAGTTGCAGTTCCATTGCTAAACTTGGTTTCATG
TGGCCCATCCACCTCGGAGAAATCTCAATAAAACTATTTTTGTCACTATC
ACGTAAATACAATGAACTGTTTCAGTTTCTGCAACTGTTTTTGTCTAGAC
AGTTATCTGATTATTTTCAGCGGGGACAAAAATCAGAGTATAATCTTCCA
CTGGGGACGATGTTTTGGCCAATTTTCCGAGTGGGAAGGTTTCCAAGTCG
GTCTGTGAGAAGGGGGTATTTTCAGAGACCGATTTGCATAATGTGTCTTT
CGTTTGAGGTGGGGCCACTAATTGTATCGCTTTTCGTGTTTCAGTTTTCA
AATGTTTCTATGCATATGAAGATTGTTTCAAGTGGCCCCAGATTTTTAGG
TTTTAGATTGCTTAATTTTTTGTCATTTATTTTCTTATATTTTCAGGAAG
ATCTTCAAAGAAGAAGGAGGACTATTTGGTTTTCTCAAACATTAGCATTA
GAAATTGCAACCTTAATGCGTAGAGACTTTTTTTCTCAAAATTGCCTTAA
AGTACTTTCCCGGGGGATACTTAGTCAAATGGAGCGTACGG Coding sequence (CDS) from alignment at sc0000182_pilon:610423..614413- >MSTRG.17745.6.p1 ID=MSTRG.17745.6.p1|Name=MSTRG.17745.6.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=4068bp|location=Sequence derived from alignment at sc0000182_pilon:610423..614413- (Clytia hemisphaerica_ch_hm2_pilon)
GAAGATCTTCAAAGAAGAAGGAGGACTATTTGGTTTTCTCAAACATTAGG
TATAAAAGCGAAATTACGGAAAAGGATATGAAAAGGTATTGGTCAAAAGC
CTTGATATGTAATCTTCACGGGATCCACCCATCCATACCAATCCTACTAC
AGTTTCATCCTAACCTTTTGAACGCCAAAGCCGGAACAAACAAGCACAGT
GGATCCGCACTTAACATAGCAATGTTTTCACATTTACCAGAGCTTTTTAA
ATATTTAATTAATCAGCCTGGAATCGATTTAGAACTTCTTGAGTTTGAAA
AATTTGAGAAGGAAAGTCGGAAACAAATCAACGAGTTCAAGCAAATATTG
AAACATAAAAAGAATACTGACAAGCAAATTGATAAGTGGTCCAATTAGTG
TTGACGATATCATGGAGCTTGTGGAAACAATCAACAAACACCGCAATGTG
AAACCAAAAATCAGTGATTTAATCAACCATTCCATAATGTCGAGAAGTAA
CAAATGTTTGGCGTTTGTTTTAACGAGTTTCCAAGGTCACTTTGAGGATC
AAGGCTTCAAGACACAAAGAAGAACGGCGATCAACCTGCAAGTTTGCCTG
TTGAGAAATGAATATAATGAACGAAGATGGAAAATCCGTAAAACAATTGG
TGAAGCGCGCGATATTCTTAATCAACGGGAAGATCTTCAAAGAAGAAGGA
GGACTATTTGGTTTTCTCAAACATTAGGTATAAAAGCGAAATTACGGAAA
AGGATATGAAAAGGTATTGGTCAAAAGCCTTGATATGTAATCTTCACGGG
ATCCACCCATCCATACCAATCCTACTACAGTTTCATCCTAACCTTTTGAA
CGCCAAAGCCGGAACAAACAAGCACAGTGGATCCGCACTTAACATAGCAA
TGTTTTCACATTTACCAGAGCTTTTTAAATATTTAATTAATCAGCCTGGA
ATCGATTTAGAACTTCTTGAGTTTGAAAAATTTGAGAAGGAAAGTCGGAA
ACAAATCAACGAGTTCAAGCAAATATTGAAACATAAAAAGAATACTGACA
AGCAAATTGATAAGTGGTCCAATTAGTGTTGACGATATCATGGAGCTTGT
GGAAACAATCAACAAACACCGCAATGTGAAACCAAAAATCAGTGATTTAA
TCAACCATTCCATAATGTCGAGAAGTAACAAATGTTTGGCGTTTGTTTTA
ACGAGTTTCCAAGGTCACTTTGAGGATCAAGGCTTCAAGACACAAAGAAG
AACGGCGATCAACCTGCAAGTTTGCCTGTTGAGAAATGAATATAATGAAC
GAAGATGGAAAATCCGTAAAACAATTGGTGAAGCGCGCGATATTCTTAAT
CAACGGGAAGATCTTCAAAGAAGAAGGAGGACTATTTGGTTTTCTCAAAC
ATTAGGTATAAAAGCGAAATTACGGAAAAGGATATGAAAAGGTATTGGTC
AAAAGCCTTGATATGTAATCTTCACGGGATCCACCCATCCATACCAATCC
TACTACAGTTTCATCCTAACCTTTTGAACGCCAAAGCCGGAACAAACAAG
CACAGTGGATCCGCACTTAACATAGCAATGTTTTCACATTTACCAGAGCT
TTTTAAATATTTAATTAATCAGCCTGGAATCGATTTAGAACTTCTTGAGT
TTGAAAAATTTGAGAAGGAAAGTCGGAAACAAATCAACGAGTTCAAGCAA
ATATTGAAACATAAAAAGAATACTGACAAGCAAATTGATAAGTGGTCCAA
TTAGTGTTGACGATATCATGGAGCTTGTGGAAACAATCAACAAACACCGC
AATGTGAAACCAAAAATCAGTGATTTAATCAACCATTCCATAATGTCGAG
AAGTAACAAATGTTTGGCGTTTGTTTTAACGAGTTTCCAAGGTCACTTTG
AGGATCAAGGCTTCAAGACACAAAGAAGAACGGCGATCAACCTGCAAGTT
TGCCTGTTGAGAAATGAATATAATGAACGAAGATGGAAAATCCGTAAAAC
AATTGGTGAAGCGCGCGATATTCTTAATCAACGGGAAGATCTTCAAAGAA
GAAGGAGGACTATTTGGTTTTCTCAAACATTAGGTATAAAAGCGAAATTA
CGGAAAAGGATATGAAAAGGTATTGGTCAAAAGCCTTGATATGTAATCTT
CACGGGATCCACCCATCCATACCAATCCTACTACAGTTTCATCCTAACCT
TTTGAACGCCAAAGCCGGAACAAACAAGCACAGTGGATCCGCACTTAACA
TAGCAATGTTTTCACATTTACCAGAGCTTTTTAAATATTTAATTAATCAG
CCTGGAATCGATTTAGAACTTCTTGAGTTTGAAAAATTTGAGAAGGAAAG
TCGGAAACAAATCAACGAGTTCAAGCAAATATTGAAACATAAAAAGAATA
CTGACAAGCAAATTGATAAGTGGTCCAATTAGTGTTGACGATATCATGGA
GCTTGTGGAAACAATCAACAAACACCGCAATGTGAAACCAAAAATCAGTG
ATTTAATCAACCATTCCATAATGTCGAGAAGTAACAAATGTTTGGCGTTT
GTTTTAACGAGTTTCCAAGGTCACTTTGAGGATCAAGGCTTCAAGACACA
AAGAAGAACGGCGATCAACCTGCAAGTTTGCCTGTTGAGAAATGAATATA
ATGAACGAAGATGGAAAATCCGTAAAACAATTGGTGAAGCGCGCGATATT
CTTAATCAACGGGAAGATCTTCAAAGAAGAAGGAGGACTATTTGGTTTTC
TCAAACATTAGGTATAAAAGCGAAATTACGGAAAAGGATATGAAAAGGTA
TTGGTCAAAAGCCTTGATATGTAATCTTCACGGGATCCACCCATCCATAC
CAATCCTACTACAGTTTCATCCTAACCTTTTGAACGCCAAAGCCGGAACA
AACAAGCACAGTGGATCCGCACTTAACATAGCAATGTTTTCACATTTACC
AGAGCTTTTTAAATATTTAATTAATCAGCCTGGAATCGATTTAGAACTTC
TTGAGTTTGAAAAATTTGAGAAGGAAAGTCGGAAACAAATCAACGAGTTC
AAGCAAATATTGAAACATAAAAAGAATACTGACAAGCAAATTGATAAGTG
GTCCAATTAGTGTTGACGATATCATGGAGCTTGTGGAAACAATCAACAAA
CACCGCAATGTGAAACCAAAAATCAGTGATTTAATCAACCATTCCATAAT
GTCGAGAAGTAACAAATGTTTGGCGTTTGTTTTAACGAGTTTCCAAGGTC
ACTTTGAGGATCAAGGCTTCAAGACACAAAGAAGAACGGCGATCAACCTG
CAAGTTTGCCTGTTGAGAAATGAATATAATGAACGAAGATGGAAAATCCG
TAAAACAATTGGTGAAGCGCGCGATATTCTTAATCAACGGGAAGATCTTC
AAAGAAGAAGGAGGACTATTTGGTTTTCTCAAACATTAGGTATAAAAGCG
AAATTACGGAAAAGGATATGAAAAGGTATTGGTCAAAAGCCTTGATATGT
AATCTTCACGGGATCCACCCATCCATACCAATCCTACTACAGTTTCATCC
TAACCTTTTGAACGCCAAAGCCGGAACAAACAAGCACAGTGGATCCGCAC
TTAACATAGCAATGTTTTCACATTTACCAGAGCTTTTTAAATATTTAATT
AATCAGCCTGGAATCGATTTAGAACTTCTTGAGTTTGAAAAATTTGAGAA
GGAAAGTCGGAAACAAATCAACGAGTTCAAGCAAATATTGAAACATAAAA
AGAATACTGACAAGCAAATTGATAAGTGGTCCAATTAGTGTTGACGATAT
CATGGAGCTTGTGGAAACAATCAACAAACACCGCAATGTGAAACCAAAAA
TCAGTGATTTAATCAACCATTCCATAATGTCGAGAAGTAACAAATGTTTG
GCGTTTGTTTTAACGAGTTTCCAAGGTCACTTTGAGGATCAAGGCTTCAA
GACACAAAGAAGAACGGCGATCAACCTGCAAGTTTGCCTGTTGAGAAATG
AATATAATGAACGAAGATGGAAAATCCGTAAAACAATTGGTGAAGCGCGC
GATATTCTTAATCAACGG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000182_pilon | genome | sc0000182_pilon:610423..614413 - |
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